XLOC_042567 (mRNA) -

Overview
NameXLOC_042567
Unique NameXLOC_042567
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000007_pilon:1042479..1043420-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042567 ID=XLOC_042567|Name=XLOC_042567|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=942bp|location=Sequence derived from alignment at sc0000007_pilon:1042479..1043420- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGTTGGTTAAATTGTTCATCGCGCAGTGGTATTTGATCAGCAGGAT TTCTTGTATCCAACTCGCATACCAAGTGTTCAAAGAGAATGTGTCGGTGA AAGACTTGGTGCCGTTTCACGAAGAAAAAGTCTTTTCTCCCTTGAAATGT TATACCGTCTGTCAACGGACCCCGGACAAATGTTGTTTTGTGGAGGTAGA CCAAGAAGCAGTGCAACCAGACAATAGTTATTTCTGCCGCTTGTTTGAGT TCACTGGGGATATACATCGCCATTTATCTCCGTCTGTTGGACGTTCTATA TCTGCTTCCATCGCTAATCAGCGTGAATGTTTAGATTGGTATAACCAAGG GTTTCGCTCCGATGGAGTGTATTACATCATGTTTCAAGGCCATCGAATGA AGGTTTATTGCGACATGACCACGTCGCCTGGCGGTTGGACGTTGCTCCAA CACCGTTATGACGGATCCGTCAGTTTCAAGCGCAACGATACTTCTTATAA AGATGGATTCGGTTCTCCATACACGGAATATTGGTTGGGCACTCGATTTC TTTACCGTTTCTTGAGTGATGTTCAGACGGTCACTGTGCGTCTTGAAGCC ACCGCAGCGAACGGTGATCAAAATTATATTGTGTACGATGGCTTAAAAAT TGGAAACGAATCTGAAAATTACATCATCAAATCTACGGGCGCATTCGTTG AAGGCTTCTATCGAACGGACTGGGACGTACGCAACAACGCACAATTTACT ATCCATCTCGATGCAAATGGTGACTTATCGACAGGCTGGTGGTATAATAT GTCACCATTCCCCATGAATTTGAACGGTTTTTATACTTCAATTGACGGTA CATCCTCTGCTATGGACGCCTTTCGATGGCACTCATGGAAAAATACAGAA CTTTTGAAAGGCTCCAAGATCATGTTGAGACGAAAAACCTAA

Coding sequence (CDS) from alignment at sc0000007_pilon:1042479..1043420-

>XLOC_042567 ID=XLOC_042567|Name=XLOC_042567|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0000007_pilon:1042479..1043420- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGTTGGTTAAATTGTTCATCGCGCAGTGGTATTTGATCAGCAGGAT
TTCTTGTATCCAACTCGCATACCAAGTGTTCAAAGAGAATGTGTCGGTGA
AAGACTTGGTGCCGTTTCACGAAGAAAAAGTCTTTTCTCCCTTGAAATGT
TATACCGTCTGTCAACGGACCCCGGACAAATGTTGTTTTGTGGAGGTAGA
CCAAGAAGCAGTGCAACCAGACAATAGTTATTTCTGCCGCTTGTTTGAGT
TCACTGGGGATATACATCGCCATTTATCTCCGTCTGTTGGACGTTCTATA
TCTGCTTCCATCGCTAATCAGCGTGAATGTTTAGATTGGTATAACCAAGG
GTTTCGCTCCGATGGAGTGTATTACATCATGTTTCAAGGCCATCGAATGA
AGGTTTATTGCGACATGACCACGTCGCCTGGCGGTTGGACGTTGCTCCAA
CACCGTTATGACGGATCCGTCAGTTTCAAGCGCAACGATACTTCTTATAA
AGATGGATTCGGTTCTCCATACACGGAATATTGGTTGGGCACTCGATTTC
TTTACCGTTTCTTGAGTGATGTTCAGACGGTCACTGTGCGTCTTGAAGCC
ACCGCAGCGAACGGTGATCAAAATTATATTGTGTACGATGGCTTAAAAAT
TGGAAACGAATCTGAAAATTACATCATCAAATCTACGGGCGCATTCGTTG
AAGGCTTCTATCGAACGGACTGGGACGTACGCAACAACGCACAATTTACT
ATCCATCTCGATGCAAATGGTGACTTATCGACAGGCTGGTGGTATAATAT
GTCACCATTCCCCATGAATTTGAACGGTTTTTATACTTCAATTGACGGTA
CATCCTCTGCTATGGACGCCTTTCGATGGCACTCATGGAAAAATACAGAA
CTTTTGAAAGGCTCCAAGATCATGTTGAGACGAAAAACCTAAGAAATGTT
GGTTAAATTGTTCATCGCGCAGTGGTATTTGATCAGCAGGATTTCTTGTA
TCCAACTCGCATACCAAGTGTTCAAAGAGAATGTGTCGGTGAAAGACTTG
GTGCCGTTTCACGAAGAAAAAGTCTTTTCTCCCTTGAAATGTTATACCGT
CTGTCAACGGACCCCGGACAAATGTTGTTTTGTGGAGGTAGACCAAGAAG
CAGTGCAACCAGACAATAGTTATTTCTGCCGCTTGTTTGAGTTCACTGGG
GATATACATCGCCATTTATCTCCGTCTGTTGGACGTTCTATATCTGCTTC
CATCGCTAATCAGCGTGAATGTTTAGATTGGTATAACCAAGGGTTTCGCT
CCGATGGAGTGTATTACATCATGTTTCAAGGCCATCGAATGAAGGTTTAT
TGCGACATGACCACGTCGCCTGGCGGTTGGACGTTGCTCCAACACCGTTA
TGACGGATCCGTCAGTTTCAAGCGCAACGATACTTCTTATAAAGATGGAT
TCGGTTCTCCATACACGGAATATTGGTTGGGCACTCGATTTCTTTACCGT
TTCTTGAGTGATGTTCAGACGGTCACTGTGCGTCTTGAAGCCACCGCAGC
GAACGGTGATCAAAATTATATTGTGTACGATGGCTTAAAAATTGGAAACG
AATCTGAAAATTACATCATCAAATCTACGGGCGCATTCGTTGAAGGCTTC
TATCGAACGGACTGGGACGTACGCAACAACGCACAATTTACTATCCATCT
CGATGCAAATGGTGACTTATCGACAGGCTGGTGGTATAATATGTCACCAT
TCCCCATGAATTTGAACGGTTTTTATACTTCAATTGACGGTACATCCTCT
GCTATGGACGCCTTTCGATGGCACTCATGGAAAAATACAGAACTTTTGAA
AGGCTCCAAGATCATGTTGAGACGAAAAACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042567XLOC_042567-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007_pilongenomesc0000007_pilon:1042479..1043420 -
Properties
Property NameValue
Aaloc1-942:943