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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:874913..877051+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042556 ID=XLOC_042556|Name=XLOC_042556|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2139bp|location=Sequence derived from alignment at sc0000007_pilon:874913..877051+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCAGAAGACTGTTTGGCCAGTCAGTAATACAAAAGCTGAACATGC
CATGTTTACAATCTCTATAGACGAAGATCGCCAACTGTTTAGAGCTGGAG
AAAGCATCAAAGGATTTGTGTACATTAATTTCAATGACACTGGTGAAGAA
TTAAATTTAGACTCTTTAAAAATATCACTTCGACAAAGTATCAGTCAACC
TCATCTGATCACTCCAAGTAAAAAGAATGTTGTTACAAATCTCATTACCG
AACAAGTTCTTATTCTTAAAGATGATTCTgagaatttttcaacttttcat
caTCAGTTAAATCAGTCTTTGCCATTGAAAGTACCTTTTATGATAGAATT
ACCACCTCCTTTGGCTTCTTCCTACAATTCTAATGATGTCACAATTTGTT
ATGAGGTAAAAGCTGAGTTGGTTCAACTGAATCTTTGTGGTGAACTTTGT
GATCTGAACGTCAATCTACCTGTTGAAGTTATTGAGGAGCCAAATGTTAT
CAAAGAACCAGCAGCACAACTTCAAGAAGCTATCAATAATAATTTAATGA
CATTTTATGCAAGTCTGAAAAAGACTGTTTTCAGCACCGGGGAAAGTGTG
GCTATTGAATTTTATCTCGATCTGAATAGTTCTTCAACAGTTTTGATGAA
CTTTCAGATTCAGCAAGTCTTGTGTTTTGCTGATAAGCGAACTGAAACTG
TAATTGTCAAAGAATTCATCGGAGAGTTTGTGTCTGACCCCGTAACTGGC
ATTCTTCTTTCCAAATATTCATTTCTTTTGGACGATACAATATTTACTTC
TCAGCCTTCAATACATAATAGCAATCACATAAAAGTCAAATACCTTGTTA
GTGTTTTGGCTCAGTTTAAAGGTCAATCTTATGAACTTTTCATACCCATA
ATCATTGAAAGAAATGATGATGGATTGTTTAAACGATACCTCAGAGTCTA
CTCAGATCAAGGTTTACCATTATTGCCGCTCACTGTGACTGTGAAAGAAT
TGAAAGCTGATGGGCTGCAATCATACATTCCAATGAAACAATGTTATGAG
AACAAACGGTTGACTGTTAAAAAAGGTCAAGTAGGTGGAATGAAGGCTAT
TCTAACCATCATCTCAGAATCCTTTAAAGCTTACACCAGCACTGATATAA
TCAAAGGTTTTGTATATTTATCCTTCCCTGATATCAGTGACAAAGTTGTT
TTCGATAAACTCTTGATCGTACTTGTTGGTGCGTGCCAGTATAAAAATAC
AGGTACTATTCATAGAAATGGGgagatgtttttattcaaaagtcagATTC
TACACGGGAACAATGATAAGAAATCTTCTCCAGTCATTTTGAAAGGTCCC
TCATCTGGTATCGTTGTGGAATTTGAATTCAATTTGGCAAAAGAAAAGAA
GTTATTACCTCCCTCATTTAATTCTGATGATGTCATGGTATCCTATGAAT
TGAAAGCTGACGTTTTTAATTTacaattgaatggaaaaaaagcTTCCTTG
TATACCAGGCTACCAATTGTTGTACATGATAATGGGAAAATACCGAAATC
AATCAgtcaattttccaagaaatctTATTCTGTATCAGTGACCCTTGATA
AACCAGCTTTCAAACACAAAGACAATGTAGATCTAACTATTCATGTTGAA
AATAAGACCAAGAAGCAATTGACTGTCCGAATATTGCTTGTACAACAaac
agaaaattcaaaaactggAAAGATTTTAAGATATATTGAAGTCAGTACAC
CAATTTTGTTGTTAGTTCTTCCCAAAAGTAAGATTGTGTCAAACGAAGTT
ATACCGCTCAAAGatgacatttttcattttcaacccACATTGTCAAATTG
TCAAATGATTTCTGTTGGGTACTCCTTAATCATTGAAGTGATGAGCGAGA
AACAAGAATTACTGAACAAGCATGTCAACCCTATCCATATTAAACGGAAA
TATGGGTTCAGCAGTACTGAGTTGTCGTGTGAAGGTTATCCTCTGTTACC
TTTAAcgttggaatatttttcaaaagatggTGACCATTCTGTACCCGAAT
TTCTTCAAACTTATTCTGACGCATCCATGGTAAAATTGATATCAAGTGGT
TCgtgttttgaaaaatggaaaggatggaaaatcaaatga Coding sequence (CDS) from alignment at sc0000007_pilon:874913..877051+ >XLOC_042556 ID=XLOC_042556|Name=XLOC_042556|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4278bp|location=Sequence derived from alignment at sc0000007_pilon:874913..877051+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCAGAAGACTGTTTGGCCAGTCAGTAATACAAAAGCTGAACATGC
CATGTTTACAATCTCTATAGACGAAGATCGCCAACTGTTTAGAGCTGGAG
AAAGCATCAAAGGATTTGTGTACATTAATTTCAATGACACTGGTGAAGAA
TTAAATTTAGACTCTTTAAAAATATCACTTCGACAAAGTATCAGTCAACC
TCATCTGATCACTCCAAGTAAAAAGAATGTTGTTACAAATCTCATTACCG
AACAAGTTCTTATTCTTAAAGATGATTCTgagaatttttcaacttttcat
caTCAGTTAAATCAGTCTTTGCCATTGAAAGTACCTTTTATGATAGAATT
ACCACCTCCTTTGGCTTCTTCCTACAATTCTAATGATGTCACAATTTGTT
ATGAGGTAAAAGCTGAGTTGGTTCAACTGAATCTTTGTGGTGAACTTTGT
GATCTGAACGTCAATCTACCTGTTGAAGTTATTGAGGAGCCAAATGTTAT
CAAAGAACCAGCAGCACAACTTCAAGAAGCTATCAATAATAATTTAATGA
CATTTTATGCAAGTCTGAAAAAGACTGTTTTCAGCACCGGGGAAAGTGTG
GCTATTGAATTTTATCTCGATCTGAATAGTTCTTCAACAGTTTTGATGAA
CTTTCAGATTCAGCAAGTCTTGTGTTTTGCTGATAAGCGAACTGAAACTG
TAATTGTCAAAGAATTCATCGGAGAGTTTGTGTCTGACCCCGTAACTGGC
ATTCTTCTTTCCAAATATTCATTTCTTTTGGACGATACAATATTTACTTC
TCAGCCTTCAATACATAATAGCAATCACATAAAAGTCAAATACCTTGTTA
GTGTTTTGGCTCAGTTTAAAGGTCAATCTTATGAACTTTTCATACCCATA
ATCATTGAAAGAAATGATGATGGATTGTTTAAACGATACCTCAGAGTCTA
CTCAGATCAAGGTTTACCATTATTGCCGCTCACTGTGACTGTGAAAGAAT
TGAAAGCTGATGGGCTGCAATCATACATTCCAATGAAACAATGTTATGAG
AACAAACGGTTGACTGTTAAAAAAGGTCAAGTAGGTGGAATGAAGGCTAT
TCTAACCATCATCTCAGAATCCTTTAAAGCTTACACCAGCACTGATATAA
TCAAAGGTTTTGTATATTTATCCTTCCCTGATATCAGTGACAAAGTTGTT
TTCGATAAACTCTTGATCGTACTTGTTGGTGCGTGCCAGTATAAAAATAC
AGGTACTATTCATAGAAATGGGgagatgtttttattcaaaagtcagATTC
TACACGGGAACAATGATAAGAAATCTTCTCCAGTCATTTTGAAAGGTCCC
TCATCTGGTATCGTTGTGGAATTTGAATTCAATTTGGCAAAAGAAAAGAA
GTTATTACCTCCCTCATTTAATTCTGATGATGTCATGGTATCCTATGAAT
TGAAAGCTGACGTTTTTAATTTacaattgaatggaaaaaaagcTTCCTTG
TATACCAGGCTACCAATTGTTGTACATGATAATGGGAAAATACCGAAATC
AATCAgtcaattttccaagaaatctTATTCTGTATCAGTGACCCTTGATA
AACCAGCTTTCAAACACAAAGACAATGTAGATCTAACTATTCATGTTGAA
AATAAGACCAAGAAGCAATTGACTGTCCGAATATTGCTTGTACAACAaac
agaaaattcaaaaactggAAAGATTTTAAGATATATTGAAGTCAGTACAC
CAATTTTGTTGTTAGTTCTTCCCAAAAGTAAGATTGTGTCAAACGAAGTT
ATACCGCTCAAAGatgacatttttcattttcaacccACATTGTCAAATTG
TCAAATGATTTCTGTTGGGTACTCCTTAATCATTGAAGTGATGAGCGAGA
AACAAGAATTACTGAACAAGCATGTCAACCCTATCCATATTAAACGGAAA
TATGGGTTCAGCAGTACTGAGTTGTCGTGTGAAGGTTATCCTCTGTTACC
TTTAAcgttggaatatttttcaaaagatggTGACCATTCTGTACCCGAAT
TTCTTCAAACTTATTCTGACGCATCCATGGTAAAATTGATATCAAGTGGT
TCgtgttttgaaaaatggaaaggatggaaaatcaaatgaATGTCGCAGAA
GACTGTTTGGCCAGTCAGTAATACAAAAGCTGAACATGCCATGTTTACAA
TCTCTATAGACGAAGATCGCCAACTGTTTAGAGCTGGAGAAAGCATCAAA
GGATTTGTGTACATTAATTTCAATGACACTGGTGAAGAATTAAATTTAGA
CTCTTTAAAAATATCACTTCGACAAAGTATCAGTCAACCTCATCTGATCA
CTCCAAGTAAAAAGAATGTTGTTACAAATCTCATTACCGAACAAGTTCTT
ATTCTTAAAGATGATTCTgagaatttttcaacttttcatcaTCAGTTAAA
TCAGTCTTTGCCATTGAAAGTACCTTTTATGATAGAATTACCACCTCCTT
TGGCTTCTTCCTACAATTCTAATGATGTCACAATTTGTTATGAGGTAAAA
GCTGAGTTGGTTCAACTGAATCTTTGTGGTGAACTTTGTGATCTGAACGT
CAATCTACCTGTTGAAGTTATTGAGGAGCCAAATGTTATCAAAGAACCAG
CAGCACAACTTCAAGAAGCTATCAATAATAATTTAATGACATTTTATGCA
AGTCTGAAAAAGACTGTTTTCAGCACCGGGGAAAGTGTGGCTATTGAATT
TTATCTCGATCTGAATAGTTCTTCAACAGTTTTGATGAACTTTCAGATTC
AGCAAGTCTTGTGTTTTGCTGATAAGCGAACTGAAACTGTAATTGTCAAA
GAATTCATCGGAGAGTTTGTGTCTGACCCCGTAACTGGCATTCTTCTTTC
CAAATATTCATTTCTTTTGGACGATACAATATTTACTTCTCAGCCTTCAA
TACATAATAGCAATCACATAAAAGTCAAATACCTTGTTAGTGTTTTGGCT
CAGTTTAAAGGTCAATCTTATGAACTTTTCATACCCATAATCATTGAAAG
AAATGATGATGGATTGTTTAAACGATACCTCAGAGTCTACTCAGATCAAG
GTTTACCATTATTGCCGCTCACTGTGACTGTGAAAGAATTGAAAGCTGAT
GGGCTGCAATCATACATTCCAATGAAACAATGTTATGAGAACAAACGGTT
GACTGTTAAAAAAGGTCAAGTAGGTGGAATGAAGGCTATTCTAACCATCA
TCTCAGAATCCTTTAAAGCTTACACCAGCACTGATATAATCAAAGGTTTT
GTATATTTATCCTTCCCTGATATCAGTGACAAAGTTGTTTTCGATAAACT
CTTGATCGTACTTGTTGGTGCGTGCCAGTATAAAAATACAGGTACTATTC
ATAGAAATGGGgagatgtttttattcaaaagtcagATTCTACACGGGAAC
AATGATAAGAAATCTTCTCCAGTCATTTTGAAAGGTCCCTCATCTGGTAT
CGTTGTGGAATTTGAATTCAATTTGGCAAAAGAAAAGAAGTTATTACCTC
CCTCATTTAATTCTGATGATGTCATGGTATCCTATGAATTGAAAGCTGAC
GTTTTTAATTTacaattgaatggaaaaaaagcTTCCTTGTATACCAGGCT
ACCAATTGTTGTACATGATAATGGGAAAATACCGAAATCAATCAgtcaat
tttccaagaaatctTATTCTGTATCAGTGACCCTTGATAAACCAGCTTTC
AAACACAAAGACAATGTAGATCTAACTATTCATGTTGAAAATAAGACCAA
GAAGCAATTGACTGTCCGAATATTGCTTGTACAACAaacagaaaattcaa
aaactggAAAGATTTTAAGATATATTGAAGTCAGTACACCAATTTTGTTG
TTAGTTCTTCCCAAAAGTAAGATTGTGTCAAACGAAGTTATACCGCTCAA
AGatgacatttttcattttcaacccACATTGTCAAATTGTCAAATGATTT
CTGTTGGGTACTCCTTAATCATTGAAGTGATGAGCGAGAAACAAGAATTA
CTGAACAAGCATGTCAACCCTATCCATATTAAACGGAAATATGGGTTCAG
CAGTACTGAGTTGTCGTGTGAAGGTTATCCTCTGTTACCTTTAAcgttgg
aatatttttcaaaagatggTGACCATTCTGTACCCGAATTTCTTCAAACT
TATTCTGACGCATCCATGGTAAAATTGATATCAAGTGGTTCgtgttttga
aaaatggaaaggatggaaaatcaaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:874913..877051 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2139:1 |
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