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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1222807..1227327+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042531 ID=XLOC_042531|Name=XLOC_042531|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4521bp|location=Sequence derived from alignment at sc0000007_pilon:1222807..1227327+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAATGCCAGTAAAACTGACGATGCTCCAGAGAAGTTAATGAAAAT
GATTAGTATAAAAACGGAGTTTCAAAACATTACATCTTTGGCATTGGACA
ATATTGCTTTGCAACATAACGATAGCACTTCCATGAACCCAAAGGAAGCA
TTAGCTCAGATCTTGAGCGCACATAAAGACACGTTGGAGAAGCTCCCGTG
CGTAAAGAGCATGCCAGTCAACAAGAAGTTCTTTTATGACGATAATGGTG
TTATCCATAAACAAGTAGTCACTGAACGTTTAGATTGTACTCTTCTCGTC
AGCTTAATTAAAGACATTGATGGGTTGACACCCTTTTCTGTGGCTCAAGG
CGCGTGCGTGGATTCCCAACATAAAGCGTGTAAACATGCCAAGGATAAGA
GCAAGCACCGGTGTGTAGACTTGAAAGCAAAGAATCTGAAAGTAGACCAT
GTTGGCTGGTTCAAATATGGAAGAGACCTTCACCGATGCTCGTATTGCAA
GAAGAATGAAGTAAAAAGCCAATATTCATGTTGCTTGTGCTGTTCAATGT
GTAACACATGTGGCTCCTGTAACAATCAACTTGATCTTCAGAAACAGTGT
ATGACATTCCGATTGGTCAGGGGACTTGATGACATTCACACCATACGTAA
CGTTGTCTCACATATCACTGTGCAAAAACTGGAAGCTTTCCTGAAAGGTA
AAGAACTTCTTGATGCTCTTCCCGACGTCAAAACGTGGCAGGAGTTTACT
GACCGTTGTAAAATAGCATACATGAATATTGTTAATTTCTTGAAGCGGGT
GAAGTATGTGAATGACCCACAAGAGCAAGTGAACTTTTCAACTCGATACG
AATATAGAATGGATGCCATTATTGTGAACAgcaacaatgacgtcatcaag
tctTACCATAAAAGTATTTACGAACATTTTCAAAACGAGTCTTCTGCGCA
GGATATAAAAGGCGATCTAAAGACATTGCTTGAGATGGTCAAAGGATTAC
AGATTGGACCAAACCTACAAGAACCATCTGCAAAAATTAAGATTGAAGGA
GCAGGGGGTGACCAAGCTATAAAACAATATATTAAGAAAGGTGAGTATGC
ATAAGGTTAAGTGTGAatcttgatgattttttcgCTACGAGATTTTTCAC
TAAATTAGTTTCGAACCAATTGttggtcttttttttctttggaagAGCAC
ATCGATTTGTACAAGTatgatttattatttattttaggAAAACCAGAGGA
ACAACATAATAAGCCAGGTACaaaatgattttcttcaatttgattCATTG
TTGATAAGTGTGTTCAACAATCTTAATAACACCAGGGTTAAAGATGGGAG
GttattaacaaagaattttcattattttagacCATTTACGCCGTCAAACT
TCTTTTGCTGAGGTCAGCAATTTAGCTTATTACTACAAAGATATCAAGGA
TGCTGGTGAGGCCGAAAGACTTCTCAATAACAAGCCACCTGGTTCTTACA
TCATTCGTGTGTCTGGAAGAGCTGAAAAAATGCATAGTCTCTCTATCAAG
TATGCCAACTATATTTTCTATCCGGCTTATTTAAAAAACGAAactgtctt
tttttttttttaagccaCGTAGTGTATCTCTCTACTATGAGCAAGCGGTT
ACCATTTACCGAAAGATAACAAATGTTCCCATCAACACTGTCTTTTTACA
CTTTTATTGAGTATCAtttttttGGTCAGCTTGACCTTTCATTGATGAGA
TTCCCTCCACGTTTAGTGATGTAGAGGTAAAAACATCGTTAGACatttaa
tgataaaaaagttcTAAAGGAGGCCTGAAAGTTACCAAGAGGTGtctgta
aaaacttttttcaccgAATATTTAGCGCGGCCGAAGATGAGGATTATCGA
CATTACAGATTGTTGGTAGATAGATATGGACAATGGAGcttcgaaaataa
ttttgtaaGTTTGCACTCAATGATTTTCTGAGCGATATAGCAACAAACAA
AAAGCAGAATACATCGACTTTCGTAATACACTTCCTACATTCGATCATGT
GGTACAAACCATTCATGCTCAGAATAGACCTTGACTTAAATTTGACGAAG
TCTCACAACGAGTAGGAGCCTGAAATTTATGCCCTCCCTCAAAGGTGTTA
ATTTACTAAATTTAGCGGATGGCCAAAGAGCAATTTTTTGTGGGTTATCT
AACTTGGCTAATCAAGCCTAGGGCTGtcaaatctgcgaaatttaGTCCCA
GCAAATTTAATAAACACggtatttttttgtcatattctTGCTAGGTGGAG
GGAAGCTTCCCAATCTTCGAAGATGCGATTTCAACCTTCGAGAAGCGGTT
CGAAGAAGTGGAACAAGTCAAACCAGCTCCCATATTCATGAAAAAGTCTG
CATCACCACGCAATTCTCCTTCTGATTATCCTTTGTCTAACAGCAACCAT
GGTGTGAATAGTACGTCGGAAAGTGAAGGTAATGAGAAATGCGTTCACAT
CCATTACACCTTTTCgcccgtagccgccaattgccacgcgggcaatattt
tgtccgctttatcccactaaaaccatcccggtccttttttcgcacctata
gaccaTATAAAAAAGTGTCCAAAAGCactggatcgagtttagggagATAA
TTAAATAATCAAGTGACACGTGCCTGACTGCGCGACTAcgttcgaaaagg
tgtattcaatcTTTAGGATAATTATCTCTAGAGATAAATCGGCGAGCTTT
TTTAAAGGCTTAGGTAATGAAAAGCTTGAAATCCAGTTTCTTTAACCTCT
ATTGGTCTGTGTGTCTGGTTTTTATAGTTCTAAAATATttatctttaatt
tttaaaacaggAGGGAGCGAATTGAACTCAGCTGCTGCTTCCAAAAACCC
AACACCGAGGTAAGCTCTCCGATCCCCAATTGAGGGAATGTTTTCCTTTG
ACTTGAGTATTTGAAGCAAAAGAATATGTAGCACAACTGCTGGTGTTGGA
ATAGAACAAAAACTCTGTTAGGTAGGTATGTGTACAGTTAATGAGGAACT
CAACGTAACCCTATGTAAGCCTGTCCCTATTCGCCCAAAATATTGGAATT
CTTATGACATAGAcatctttcaatttttagcgAAGATGGAGTCGGCTATG
CAATAACTGAGAAGAAGGAAGATAATGGAACAGAATTATCTTACTTTTAT
CCAAATATTGATCGTCAAAAAGCTGAAGAAATGCTGGCAAAAGAAAATCC
GGGAGCCTATTTGTTGCGATCGAGCTCGAAATTTCATGATGGATATGTGC
TTTCATTCAGGTGAAGATTTTTAACCTAGACCTCTGGCCAGAAAGATATT
ATTTTGCAATCATCAGATAGCAACACCTCTGCAGTAAAAATTTAACTATC
TATGCTAACTAAACTTCActgaagaaaaacgaaaaacacAAGCCGAAAGA
AATTACCGGAAACATAAATATTTAGCCCAACTGAAAATAAACCGTTTCAT
TTTACAGAAAAGAGCATTTAAATATTCGCCCAAAAGAAGGATCGATTGGG
AAATATATCTTCGATAAATCACAAGTGAGTAATTTGTTTGATCCAAAACG
TGTCCAAAACTACGCTACAAAAACTACTTTGTTTGGGAAGAACGGCCATC
CCACGGTTAGCGAAGTGTCTAAATTATGAACGATTTTATTGGAATGTAAT
CGAGATCTAAAGCACTTTAAACCCTTGTcttacagccccggtggaacttc
ttcccacggtggagataaaaatttctatcacAATGGAGAAAGGAATTTTT
TCCACCGAGGACGAAATTTTAGCCGAATTTTCAAGCGGGTAGagcaggca
cgacgcaacgggtacggcaggtacggcggccccgccgtaccagattttca
caaaaatacccgaagttttcctcttcgtcggtcaaatcgctataaaatcg
cttaaatttcctcattcgccgtaccagatataaaaagcttccgtcgtgcc
tgagGGTCCCGCtgggtttgtgacacaggggtgtcgcTGTACTTTTAAAC
ATAATAGGCTCTGAGACTTCACATAAGATTCCGTTTCAAATTTAACTTAA
TGTTTTGGTGTAACTGTATTTTGATCACGAAAGATTTCGTAGCATTTGAG
CCCACTAAATgctcattggacttttccagaaaaaaaccgtataccccctg
ttgaggaggtccatttccgttccaagggggtaatgtttgatatgtggcgg
aattccttAGGGAGATAcagggtttaaacctgaaattgcctggaattcca
aggggttacagcatttccagccacagagggatggacctcctcaacaggcg
GTATACGGTTtgtttctggaaaagcccatttctgCCCTAAAAATGCGCCA
TTCTTTCTGTGTTTAGACTGGTTTGATTTTCAACACGGTGCGAGGTGCTA
TAGACCACTACGTTAAAAGATGGGGAGAACGCAATGGAACACAACCATTT
CCCTTGACAAAAGACAGCTAG Coding sequence (CDS) from alignment at sc0000007_pilon:1222807..1227327+ >XLOC_042531 ID=XLOC_042531|Name=XLOC_042531|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3906bp|location=Sequence derived from alignment at sc0000007_pilon:1222807..1227327+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAATGCCAGTAAAACTGACGATGCTCCAGAGAAGTTAATGAAAAT
GATTAGTATAAAAACGGAGTTTCAAAACATTACATCTTTGGCATTGGACA
ATATTGCTTTGCAACATAACGATAGCACTTCCATGAACCCAAAGGAAGCA
TTAGCTCAGATCTTGAGCGCACATAAAGACACGTTGGAGAAGCTCCCGTG
CGTAAAGAGCATGCCAGTCAACAAGAAGTTCTTTTATGACGATAATGGTG
TTATCCATAAACAAGTAGTCACTGAACGTTTAGATTGTACTCTTCTCGTC
AGCTTAATTAAAGACATTGATGGGTTGACACCCTTTTCTGTGGCTCAAGG
CGCGTGCGTGGATTCCCAACATAAAGCGTGTAAACATGCCAAGGATAAGA
GCAAGCACCGGTGTGTAGACTTGAAAGCAAAGAATCTGAAAGTAGACCAT
GTTGGCTGGTTCAAATATGGAAGAGACCTTCACCGATGCTCGTATTGCAA
GAAGAATGAAGTAAAAAGCCAATATTCATGTTGCTTGTGCTGTTCAATGT
GTAACACATGTGGCTCCTGTAACAATCAACTTGATCTTCAGAAACAGTGT
ATGACATTCCGATTGGTCAGGGGACTTGATGACATTCACACCATACGTAA
CGTTGTCTCACATATCACTGTGCAAAAACTGGAAGCTTTCCTGAAAGGTA
AAGAACTTCTTGATGCTCTTCCCGACGTCAAAACGTGGCAGGAGTTTACT
GACCGTTGTAAAATAGCATACATGAATATTGTTAATTTCTTGAAGCGGGT
GAAGTATGTGAATGACCCACAAGAGCAAGTGAACTTTTCAACTCGATACG
AATATAGAATGGATGCCATTATTGTGAACAgcaacaatgacgtcatcaag
tctTACCATAAAAGTATTTACGAACATTTTCAAAACGAGTCTTCTGCGCA
GGATATAAAAGGCGATCTAAAGACATTGCTTGAGATGGTCAAAGGATTAC
AGATTGGACCAAACCTACAAGAACCATCTGCAAAAATTAAGATTGAAGGA
GCAGGGGGTGACCAAGCTATAAAACAATATATTAAGAAAGATGGCAAATG
CCAGTAAAACTGACGATGCTCCAGAGAAGTTAATGAAAATGATTAGTATA
AAAACGGAGTTTCAAAACATTACATCTTTGGCATTGGACAATATTGCTTT
GCAACATAACGATAGCACTTCCATGAACCCAAAGGAAGCATTAGCTCAGA
TCTTGAGCGCACATAAAGACACGTTGGAGAAGCTCCCGTGCGTAAAGAGC
ATGCCAGTCAACAAGAAGTTCTTTTATGACGATAATGGTGTTATCCATAA
ACAAGTAGTCACTGAACGTTTAGATTGTACTCTTCTCGTCAGCTTAATTA
AAGACATTGATGGGTTGACACCCTTTTCTGTGGCTCAAGGCGCGTGCGTG
GATTCCCAACATAAAGCGTGTAAACATGCCAAGGATAAGAGCAAGCACCG
GTGTGTAGACTTGAAAGCAAAGAATCTGAAAGTAGACCATGTTGGCTGGT
TCAAATATGGAAGAGACCTTCACCGATGCTCGTATTGCAAGAAGAATGAA
GTAAAAAGCCAATATTCATGTTGCTTGTGCTGTTCAATGTGTAACACATG
TGGCTCCTGTAACAATCAACTTGATCTTCAGAAACAGTGTATGACATTCC
GATTGGTCAGGGGACTTGATGACATTCACACCATACGTAACGTTGTCTCA
CATATCACTGTGCAAAAACTGGAAGCTTTCCTGAAAGGTAAAGAACTTCT
TGATGCTCTTCCCGACGTCAAAACGTGGCAGGAGTTTACTGACCGTTGTA
AAATAGCATACATGAATATTGTTAATTTCTTGAAGCGGGTGAAGTATGTG
AATGACCCACAAGAGCAAGTGAACTTTTCAACTCGATACGAATATAGAAT
GGATGCCATTATTGTGAACAgcaacaatgacgtcatcaagtctTACCATA
AAAGTATTTACGAACATTTTCAAAACGAGTCTTCTGCGCAGGATATAAAA
GGCGATCTAAAGACATTGCTTGAGATGGTCAAAGGATTACAGATTGGACC
AAACCTACAAGAACCATCTGCAAAAATTAAGATTGAAGGAGCAGGGGGTG
ACCAAGCTATAAAACAATATATTAAGAAAGgAAAACCAGAGGAACAACAT
AATAAGCCAGgAAAACCAGAGGAACAACATAATAAGCCAGacCATTTACG
CCGTCAAACTTCTTTTGCTGAGGTCAGCAATTTAGCTTATTACTACAAAG
ATATCAAGGATGCTGGTGAGGCCGAAAGACTTCTCAATAACAAGCCACCT
GGTTCTTACATCATTCGTGTGTCTGGAAGAGCTGAAAAAATGCATAGTCT
CTCTATCAAacCATTTACGCCGTCAAACTTCTTTTGCTGAGGTCAGCAAT
TTAGCTTATTACTACAAAGATATCAAGGATGCTGGTGAGGCCGAAAGACT
TCTCAATAACAAGCCACCTGGTTCTTACATCATTCGTGTGTCTGGAAGAG
CTGAAAAAATGCATAGTCTCTCTATCAACGCGGCCGAAGATGAGGATTAT
CGACATTACAGATTGTTGGTAGATAGATATGGACAATGGAGcttcgaaaa
taattttCGCGGCCGAAGATGAGGATTATCGACATTACAGATTGTTGGTA
GATAGATATGGACAATGGAGcttcgaaaataattttGTGGAGGGAAGCTT
CCCAATCTTCGAAGATGCGATTTCAACCTTCGAGAAGCGGTTCGAAGAAG
TGGAACAAGTCAAACCAGCTCCCATATTCATGAAAAAGTCTGCATCACCA
CGCAATTCTCCTTCTGATTATCCTTTGTCTAACAGCAACCATGGTGTGAA
TAGTACGTCGGAAAGTGAAGGTGGAGGGAAGCTTCCCAATCTTCGAAGAT
GCGATTTCAACCTTCGAGAAGCGGTTCGAAGAAGTGGAACAAGTCAAACC
AGCTCCCATATTCATGAAAAAGTCTGCATCACCACGCAATTCTCCTTCTG
ATTATCCTTTGTCTAACAGCAACCATGGTGTGAATAGTACGTCGGAAAGT
GAAGgAGGGAGCGAATTGAACTCAGCTGCTGCTTCCAAAAACCCAACACC
GAGgAGGGAGCGAATTGAACTCAGCTGCTGCTTCCAAAAACCCAACACCG
AGcgAAGATGGAGTCGGCTATGCAATAACTGAGAAGAAGGAAGATAATGG
AACAGAATTATCTTACTTTTATCCAAATATTGATCGTCAAAAAGCTGAAG
AAATGCTGGCAAAAGAAAATCCGGGAGCCTATTTGTTGCGATCGAGCTCG
AAATTTCATGATGGATATGTGCTTTCATTCAGcgAAGATGGAGTCGGCTA
TGCAATAACTGAGAAGAAGGAAGATAATGGAACAGAATTATCTTACTTTT
ATCCAAATATTGATCGTCAAAAAGCTGAAGAAATGCTGGCAAAAGAAAAT
CCGGGAGCCTATTTGTTGCGATCGAGCTCGAAATTTCATGATGGATATGT
GCTTTCATTCAGAAAAGAGCATTTAAATATTCGCCCAAAAGAAGGATCGA
TTGGGAAATATATCTTCGATAAATCACAAAAAAGAGCATTTAAATATTCG
CCCAAAAGAAGGATCGATTGGGAAATATATCTTCGATAAATCACAAACTG
GTTTGATTTTCAACACGGTGCGAGGTGCTATAGACCACTACGTTAAAAGA
TGGGGAGAACGCAATGGAACACAACCATTTCCCTTGACAAAAGACAGCTA
GACTGGTTTGATTTTCAACACGGTGCGAGGTGCTATAGACCACTACGTTA
AAAGATGGGGAGAACGCAATGGAACACAACCATTTCCCTTGACAAAAGAC
AGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1222807..1227327 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1849-1953:4417 |
| Aaloc | 1783-1848:3509 |
| Aaloc | 1603-1779:3132 |
| Aaloc | 1555-1599:2863 |
| Aaloc | 1369-1551:2295 |
| Aaloc | 1291-1368:1877 |
| Aaloc | 1123-1287:1383 |
| Aaloc | 1093-1119:1240 |
| Aaloc | 1-1089:1 |
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