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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1217360..1220559+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042397 ID=XLOC_042397|Name=XLOC_042397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3200bp|location=Sequence derived from alignment at sc0000094_pilon:1217360..1220559+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttttgttcatttccaGATTTCACCAAATTACATGTTCATTTCACAAGC
AGTATATAAGAGGTTCATACGTGGATCAACAGTCATGAAGGTTTTGGCAA
CAGCAACTGTACTCTTGGTTGTCTTCGTACTTCACAGTCAACTCAATAAT
GCTGAAGCAGACACATTAGGCAAAAGTTCTGGCGGTGGAAGTAAAAAGAA
GGGACCTAAAGTTACACATATAGTGAGTTATTAAAGTTTGatatttaagg
aaaagcttGGCCTACCCCCTTCTGAGATCCCTACGCGCTCATAAAAGTAG
GAATTTAGTCAAAGGCATGATTCAGTAAACCCTCTCATCTCAATCTACCT
GTTTATGAAATCGCTGATCTGACATATAACTTCTTAATTACACCagcctt
ttttttttgttagatattctacctttttataagtttttttttcaatttat
gcCTGCTTAATTAATTGATTGACCTGGATTGACCCATCTTTGTAAAAATT
CTTATTCATCGTTCCAGGttttttttgatatgaaaattggGAACAAAGAA
ATAGGGCGTATCAGAATTGGTTTATTTGGAAAAACTGTGCCCAAAACTGT
TGATAATTTTGCACAATTAGCAACTGGAGAGGTGAATATACAAACGTCTC
TTTCAACAATTCTTCTAGCATTAGATTTTCAGTCCTTGCAATACAGATTG
TTTGGTCAATATTTTTATACTGATTGTCTGGAAATACTTTTAATGttcaa
tttcattgattttataGCAGCTTTTCTTGAATCCATCCATTGAAAGTTAA
AAGGCTtcaatgaatttttgaaatcaaatatttattttattcataGAAAG
GCTTTGGATTTAAAGGCAGCAAGTTTCATCGTGTCATCAAAGACTTCATG
ATTCAAGGTTTGTATGTTCTCCTAAAACTGAAACTAATATCTGTCTATAA
GCTACCCTCCCATCTTATTTTAAGTATAATTGCAATGTAACctaattttt
aattaaattttatctctaatttgtttacgtccctaattatgtttatttat
tcaatttttgtaAACAGCAGGGCAGCATGCACTTACAGTACTCTTAAGGC
CAGTACTCTTAAGGCCTAGACCTATCATTACCGATCCCTTGTAATCAGGC
GTTTTTTATAGAGTGCCAGTTGCACCTTATGGATTAAAAAGGGTCATAAA
TTAATTCTGTTGAAATATTCTCAGTTAGATCCAGTGCAGTATGGGTTTTT
CAGATGATATATGCTGTCCTATTGGCTGGATGTATATATTATAAacaatt
aatgttttttttcttttttttactgaTAGGAGGTGATTTTACACGTGGTG
ATGGTACAGGAGGTAGGTATGATGAAAGAATTTCATTCAGCTTCTTCAAA
ATGCATGAAACATTCCTTTTTACACCATGGTAGAAATTAGAGATATCGAC
CATCAAAATATCTTGATACTGTAGTATTCGCTTCTTTAAAATAATATATG
ATTGgtaatttgaaacttttttaacaaatcaattttaatgaaaatccgta
aaattacTTCATCGAGaaaaaaaGTAATCAATTATCTTCGCACCCTCGTC
CAAGGAAAATTTTAGTCAGGAAAAATCAGGTCAAACTCATATAATATCGG
GGCACCTTCCCCGACAAATTCTTCGATGTTACTCACATGGgatttatttc
attttgtttatcaCAGGACGAAGCATCTATGGTGATAAATTCCCTGATGA
GAACTTCAAATTGAAGCATTATGGTCCAGGATATGTCTCAATGGCAAATG
CTGGCAAAGACACCAATGGATCCCAATTCTTTATCACCACTGTCAAAACT
GGGTGGCTTGATGGAAAGCATGTCGTCTTTGGTAAAATCCTTGGTGGAAT
GGTATGTTTAGAATTGAAtcattttaaccctattcgtactagctTTTTCA
GTGGTGAAACTAATGTTAATaactcctgaaataatagagctttggacatg
aaattttctgtaaattcccaACTTGTGGTGAAGGAAAAGCTCCCCCTTTA
GTTCTGAATCgaccctaaaagcctagtatgaataggatTACGGCTGTTCT
AAATCCACTGGCCATAAAACAGTCCAAAGATCCTTAGCGAATAGATATAA
TAGAATTGATAGCATCGTATTCGATTGAAATCCAAAATCGATTATAATCG
ATTGTGTTTCATAAACAAtcgattacacgtttttttttaagaaactagtt
ttaccaagcagcctcgatgtttcttaagaaattgaccttttgagccttaa
aatgtttcttacatgtttctaaacttttggacataatcagcctatttttc
atgcaaagaaaaatcatttgttttgattggaaggttcttaaaaaaaacaa
attaaaaaatgttattttctcattctcagcctcagcatgtttcttggatg
tttcttagtttttagacaTTCATGTTTCTtcaaagtgtgtttcttaaaaa
aagaaacgtgtaattGTTTATTGCCATCAATGATCCCAACCAATATTTGG
AATCTGTTAAAAATTTATAACTCTATTAGCAACTGATAACACTTTCGTAA
AAGATGACTGATTGAGTGCCAAGATTATGAATATCGATCTGAACGGTACT
ACTTTGCACGCACGGGACAGAGGCAAGTGTGCAAAGTCATTAAAGTAGAg
actttctttttgaatttgcGAGAGAATTCAAATTCGcgttcgaaaaagtt
ttttcgttaGTATTAGAAAGTTTGATCACAGTAAATTAGCTGCGTGTTAC
AATTTAATTTAGACTGAAAAGTTCCTGAAATCACTTTAAATTAGCGCGCG
TATAAAAGTGCCAGTAGCAGCAATACTTAGCAGTCAGAAGAAATACAAAA
TCAGAATGTTTTTCGACTGACTGGACAGAGAGAAAGACAAGAAAGTTTCC
TGGTTCACTAAAAGGTAAATTCATCATTTTGCTTACAATTTTTAAGCTAA
CACATAATGCTACATTTCTGAGCattattttgtataaaaattgctttgca
aatcttttttttcaatttttttttcaggacgtTGTTCGGATAATTGAAAA
CACTCCTGTTGACGGAAGCACTCCAAAAGAACAAGTCATTGTTCACGATT
CTGGGCTCGAAACACTCGATAAACCTTTCAATGTAGAGAAAGAGGGATAA
Coding sequence (CDS) from alignment at sc0000094_pilon:1217360..1220559+ >XLOC_042397 ID=XLOC_042397|Name=XLOC_042397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000094_pilon:1217360..1220559+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttttgttcatttccaGATTTCACCAAATTACATGTTCATTTCACAAGC
AGTATATAAGAGGTTCATACGTGGATCAACAGTCATGAAGGTTTTGGCAA
CAGCAACTGTACTCTTGGTTGTCTTCGTACTTCACAGTCAACTCAATAAT
GCTGAAGCAGACACATTAGGCAAAAGTTCTGGCGGTGGAAGTAAAAAGAA
GGGACCTAAAGTTACACATATAttttttgttcatttccaGATTTCACCAA
ATTACATGTTCATTTCACAAGCAGTATATAAGAGGTTCATACGTGGATCA
ACAGTCATGAAGGTTTTGGCAACAGCAACTGTACTCTTGGTTGTCTTCGT
ACTTCACAGTCAACTCAATAATGCTGAAGCAGACACATTAGGCAAAAGTT
CTGGCGGTGGAAGTAAAAAGAAGGGACCTAAAGTTACACATATAGttttt
tttgatatgaaaattggGAACAAAGAAATAGGGCGTATCAGAATTGGTTT
ATTTGGAAAAACTGTGCCCAAAACTGTTGATAATTTTGCACAATTAGCAA
CTGGAGAGGttttttttgatatgaaaattggGAACAAAGAAATAGGGCGT
ATCAGAATTGGTTTATTTGGAAAAACTGTGCCCAAAACTGTTGATAATTT
TGCACAATTAGCAACTGGAGAGAAAGGCTTTGGATTTAAAGGCAGCAAGT
TTCATCGTGTCATCAAAGACTTCATGATTCAAGAAAGGCTTTGGATTTAA
AGGCAGCAAGTTTCATCGTGTCATCAAAGACTTCATGATTCAAGGAGGTG
ATTTTACACGTGGTGATGGTACAGGAGGAGGTGATTTTACACGTGGTGAT
GGTACAGGAGGACGAAGCATCTATGGTGATAAATTCCCTGATGAGAACTT
CAAATTGAAGCATTATGGTCCAGGATATGTCTCAATGGCAAATGCTGGCA
AAGACACCAATGGATCCCAATTCTTTATCACCACTGTCAAAACTGGGTGG
CTTGATGGAAAGCATGTCGTCTTTGGTAAAATCCTTGGTGGAATGGACGA
AGCATCTATGGTGATAAATTCCCTGATGAGAACTTCAAATTGAAGCATTA
TGGTCCAGGATATGTCTCAATGGCAAATGCTGGCAAAGACACCAATGGAT
CCCAATTCTTTATCACCACTGTCAAAACTGGGTGGCTTGATGGAAAGCAT
GTCGTCTTTGGTAAAATCCTTGGTGGAATGgacgtTGTTCGGATAATTGA
AAACACTCCTGTTGACGGAAGCACTCCAAAAGAACAAGTCATTGTTCACG
ATTCTGGGCTCGAAACACTCGATAAACCTTTCAATGTAGAGAAAGAGGGA
TAAgacgtTGTTCGGATAATTGAAAACACTCCTGTTGACGGAAGCACTCC
AAAAGAACAAGTCATTGTTCACGATTCTGGGCTCGAAACACTCGATAAAC
CTTTCAATGTAGAGAAAGAGGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1217360..1220559 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-747:3078 |
| Aaloc | 442-624:1719 |
| Aaloc | 409-438:1332 |
| Aaloc | 346-405:847 |
| Aaloc | 232-345:518 |
| Aaloc | 10-231:1 |
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