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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000241_pilon:280639..287837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042353 ID=XLOC_042353|Name=XLOC_042353|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7199bp|location=Sequence derived from alignment at sc0000241_pilon:280639..287837- (Clytia hemisphaerica_ch_hm2_pilon) GGTATGGAACGTGCAGTCATTCTAAATTCATATGACGTCATCAAAGAGGC
TTTAATGACCAGAGGTACTGACTTTGCGGGTAGACCCACAACTGACATAC
CAAACAAAATAATCAGTAGAAATTTCACAAATATCGCTCACCGGGATTAT
TCAAAAACATGGGCGTTTTTGAGAAAAGTTGCGTATAAAAGTTTACATGT
CTATGGATCAGGAATGAAGAGGCTTGAAGATTTGATCACAGAAGAAGTGG
ACAAAATGTGTTCGGTGTTGTCACGTGATGTTGGGAAACCAGTCTTGATC
GACTATTATATCGGTAAGTATATATAATTTTTGTATTTCATATTTTTTCT
TTTATAACAACAATCTTATAGGAACAATGAGGCTCAAAATTGTCAAAAAA
TAAGAATAATTTAATAACAATCTCAAACCTGGAATTGCTCAATTTCAAGT
AATCTAGGGATCATAGTAGTGAAAAATGGATTTAAATCCTAAAATACTTT
AATTTCACCCTAGATAAGAAGGAATCACGAAAATTTTTACCTAGATTTTA
GTATCGACCCCCCCCTCTGTTTGAAGTGGTCATTTAATATATAATCTCTC
TTTCGATGATATTGGAAATACGTTTCGTGATTTTCTCTTCATAGTATCTT
ACTATACTAAATGAGTTTATGAAAAATGTCTGTAACGCTAGCCCAGTAAC
ATATTAAGGTTTCTAAAATTTGAACGCCGCGGCTGGAAAACCTATCCACC
TTCGATACAAAAAGTCTCGCGCTAAGTTTGACAAGCGTAGAAAACTCGGA
TTAGAGAAGACTAGCCGTCACCCGGCGTCGCACCCGCCGAGGAGTAGATA
AGCACTCACTCTACGCAACGGCAAAGATGGCGGACGCAAAACCGTCAATC
TGTAACTTACGGTACTGATTTTCCAGAAATTTTAACTCTTTGCTTAGTGA
ACAGTGCTTAAAAGCAGAAGAAAGTTTACACCAAAGATGGAAGAATTGAT
GCGGAAACTTTTTCCTGAAAATTACAGTTCAACCGGTGCTGTACAATCAG
AATCTTTGGTGGCGAATGTACCCGTTCCTGACCTAGCTACCGTGCCCGTG
TACCGTGACTCTCAACCTCCGAAAGAACCCACCTAAAGAACCACCGAAAA
ACGAAAGAACTTCAATACGAATGTAAATGGGGTTGCAAAAGGTCATTTTC
AAAGCCATCGGGAAGGTCAAATCACGAAAGAAAATGTCCGCTTAAAAGTC
ACACTAAAGAATTCGAAGATCCTGTATCGAAAAAACTGTCAACCTTAAAG
TGACATCACTTAGCCTAAATAAAGAATCGTCGTCAGAAACCGATAAATCC
GAAAGATTTCCAGCCAAAAGTATGGGGCAATCACACAGTGAATGACATCG
ATCAGATCCTTTCTGCCGCGTTCAATGAAACCAGTCAATGGCGGAAGAAT
ATCTTCAACGTCCCAAGTGGTGCAGTCGGTAAAAGCTTTGTTGAGGAAAT
CACTCGCTTGATAAATTTATGGAACAATCTGTCACCTTTGTCGAATGTCG
CCTTGAAAGCCCTGTCCGTGTTACCATCGCTCCTTTTACAGAAACCATCA
AAGACATCGAAATCGAGAGAACATACGAAAACATCTACAGCGACGTCTGG
ATCTTTGGAGAGAAGGCGATTTTGACTCGTTGATCCGCGAAAGCCGAATG
CTACAATCAAAATTTTCAAAGTCTGCTGCTGATCGAGTTACATCAATATC
GAAACGATTTAGTGATTTGATGTTTCAAGGCAAAGTAAACGCAGCAATCA
AACTCTTATCTAACTCAACGAATTCACACGGAATTGTACCAATCAACGAT
ACCACGTTGCAAAATTCTTCAGCAAAAGCATCCTAGAGGTCAACCAAAGA
TTGACGAGCTGATTGTTCAGGGACCATTCAACAAAATCGACCCCACGCTT
TTTGAAGCCATCGATGAAGAACTCATAAAAAGTATGGCAGCTAAAACAAA
AGGTTCTTCCGGCCCCTCCAAGATCGATGCACAAATGTGGCAACGTATCC
TTTTGTCAAAAAACTTCGGTGATCGTTCTAGTGATTTATGCAAGGCGATT
GCAAGGATGACGAGAATCATGTGCACTGAACAATGCAACAAAGAATCCGG
TAGGGACATGGAGGCGTTCTTATCGTGCACCCTGATACCTTTGGATAAGA
ACCCCGGCATTCGACCGATCGGCATCGGGGAAGTTCTTAGACGCATCGTT
GGAAAGACTGTTACAACATTCCTGAGGAATGAAATACAAGAAGCAGCTGG
CAATCTCCAACTGTGCGCTGGTCAGCTGGGTGGATGTGAGGCTGCAGTGC
ACGCGATGGCAGACATCTACAACGACGAGAACACAGACGGGTGTTCTACT
GGTCGACGCTTCAAATGCATTTAACAGCATAAATCGTGAAGTTATGATGC
ACAACATTAACATCCTTTGTCCAACCTTGGCGATGTTTGCTACCAACTGC
TATTCGAACCACGTCCGTCTGTTTGCGATTGGAGGAGCAGAGCTGTCGTC
TTCTGAAGGTACAACACAAGGAGATCCGATCGCTATGGCTCTCTACGGCA
TATGTTTGCTTCCCTTGACCGACACCCTCCGAAACGTACCAGATACCAAA
CAAGTCGCGTACGCTGACGACATCACTGGTGCTGGTAAAACTTGTTGCAC
TACGCAAGTGTGGGGGATGACCTAACGCAACTCGGTCCAACTATCGGCTA
CTACCCAGAACCTTCTAAGTCATGGTTGATAGTAAAACCCGAAATGTATC
AAACGGCACTCGACACATTCGAAGGTACGTCTATAAAGATCACAGCAAAG
GGGCATAAACATCTCGGTGCTTCTGTTGGGGAAAAAAGCTACAAGAAGGA
ATTCGTTTCAAATAAAGTCGAAACCTGGGTTAAAGAAATCAAAACTTTGT
CAGACATTGCAATAACTCAACCCCAAGCTGCGTATGTCGCCTTCGTTATT
GGCTACCGGCAAAAATTCAACTATATCATCCGAACTCTAGACGATATATC
AGAATTGCTTCGACCCATCGAAAATGTCATCCGTTTTTCACCTCATACCA
GCCATATGTGATGGCAGACAGTGCTCCGATATTGAAAGGAAGATCCTCTC
GTTTCCGATCAAGATGGGAGGCCTTGGAATCATCAACATCGAGGATGAGG
CTAAATTTCAAAACGAAACAAGTCGTTTGGCAACTAAAGTGCTAGTCGAG
CGCATCATAACACAATCAAATGAATCAATTGATCCAAGTCAATCGAAAAA
GATGTTGAAATCACTAGCCGCTAAACGAATTGGAGAACAAAAACGATCAC
TCGATCAAATCGTTCAACAACTCCCATCAATCAACCAAAAAGCTTTGGAA
ATCGCTTCATCTCAAGGTGCTTCCTCGTGGCTGACCACTCTTCCACTGAA
AGAAGAGAATTTTGTATTGAATAAACGTGAATTCGCTGACGCACTCCACA
TGAGGTATGGCTGGGAAATGAAGCGACTGCCCATCAAATGTGCCTGCTCA
GCCAACTTCACAATCGACCATGCGCTATCTTGCCATCTTGGCGGCTACGT
TATCCATCGACATAACAACGTTCGCGATACTCTGGCAACCCATGATGAAT
GAAGTCTGTCACGACGTGTCGATCGAGCCCCAGCTTATGGATTTGTCTCG
TGAACAGGTCGATTTACCACGCTCATCTGTTACTGGGAATGAAGCTAGGG
CGGATGTTAGTGCTAATGGATTTTGGCAGCGGTATCAAAGAGCATTTTTT
GACGTGAAGGTTTGCAACCTTTTAGCTCCGAGCTATCGCATAAAATCTAT
TGGCACTACATTCACTTCCCTTGAAAGCAAAAGAAGAGAGCATATAACGA
ACGGATTCTTCAAGTTGAGAAAGGGACTTTCACCCCATTAGTATTTGGTG
CTACAGGTGGTGTAGCCCGAGAATGCTCAATTTTTATGAGCAGGTTAGCT
GATAAAATCTCGGCAAAACAAAAATGCTCGAAAAGTGAGGTTGTGAATGG
CATACGACGCAAAATTTCCTTCGTTTTGATCCGATCAGTGGTTGCTTGCC
TGAGAGGTGAACGATCGAGTCGTTCGTTTACCCCAGAACAAGCGGCACTG
AAGGACTCCAAACTGACGGAAATTTTGACGTCCTTGCATGTTTGAGTGTT
GTGGGTTAGACGATTACCATAGGCTACTTTTTCGAGGGTTTCTTTTCAGT
TTTTCATCATTTTGGTCTTTTCAGGTGTTTCATTGTTCTCTTTTTTTACA
ATTTATACAAAAGTATGTTTGTTAATATATTTGACTCATGTTTTATGTAA
ATAATTTTGATGACAAAGAAAAAAAAAAAAAAAAAAAAGTACTGCGACGT
CTTAAAGTTACAAATAAAAAGGTGTGGCATTTTTGTTGCACGATTTCGAA
TTATTTTATATCAACACACGCAACAAAATCCAATATTGTTGTTTGATGAT
TAAACTTCGTCTAACATTATTTAAAAAGGTTTCAATGTTGGTTGCATTGC
ATATGCGCCGGTCTTAAGCTGTCCTCATGTGAAGCCAACAAACGGGAAAA
CCTTCAGTGCTCAACCGCAAAGCGCGAGTCTCTCCTTCACAACTAAGGTT
TTTTCTTTCCTAGAAGCAACCCTCTCACCACCTCAGACACCTTTGGGCGT
CTGCAACGACGGGTACCCTCCATAATTTTGACAGGGTCACTATGGCATTT
CATTGAACACAAACTTCCGTTATCTTAAAAAGACATATAATCGAGGCTTA
CAGACACAAAATTTTGACTAATGTACAAAGTTTAGAAGTATAATTTTTAT
TATTGTATTCGGCATTTTAAGCCAAAACGATGTCAGGAATTAACCCACAT
TATCGTATTTTAAAGGCTTTTGATGTGCAAGCAAAACCGTTAACCGGCGT
TTGCGACGACGGGAACCGTCTAGTACAACACTAATTGGATTTAATACGGA
CGTCCATTATTGAATAGCGCACCGCTGTTTAATTTTTGACATAATCATTA
CTCTCGATGTGTTTGTACGAGTTCCAATCCCATCAACCTTTGCGTTAATC
TCTTTTGCATGTTAATTGCATCGTTTGACAAAAGATATATAACAGTTTGC
ACGTATCTTTAATTGAGCCGCGTTGAATTGTGGGATTGCAACTCGTACAA
ATGTCAAAAGAGTGAAAAGTAATAATTATGACGTATGCATTGCGGAGCGC
TATTTCACAAAAATAAACGTGTTTTGTGGTTCTCAAATTTTTGTTGACGT
CAGCAATTACGTCTTTTTAAAACAACCTTCCGTAATAACTTTATTGGCTT
CATTTTCATAAATAGGTTGTAATGTTCTTCTGAACGGGCATTGAAAATGC
TTTCCAAATGTATGTAAATGTTCTGGTCTGTGAAATACACAAACCAATTT
TTTGGGTCTGAGATTTAAATCCATTTAAGACCCCTACTCTCGGGTACCTA
ATAGCCGCCCCCCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCCAG
GACATTCTTATTCCAACCCCCCGCTTATTAATTTTTGGGAAAATGTTCTT
GAAAGTTCCCTCTTTTGTCCTAATTCAGCTGTATTAGCCTCCTTTTCAAA
AATTTTCCACCCAGGACATTTTTATTCCAACCCCCCCGCTTATTAAGTTT
TGAGATTTTTTCCAACCCCCCCGCTTATTCCAACCCCCCCGGCTATTAGG
TACCTGAGAGTAAACTACAATTGTGCAAAGTTTCATACTTTTACATAGGC
TACGTCGTATCTTCCTTCGTTTAGAGCGTAAAACTCTTACTCTTCGGGAT
ATGCGCACTGCTTTTGTTTTGAATATTGAACTTCTCCGGATACATTGCAT
GCGCACTGAGGTTTTAATGAAACAATAGAGTTTCAAAACCGAAGCCAACC
AGCTGTGTTTTAAACATTTTTTTATTTTAAATCTCTAAACTAACTTAAAG
AAACTGATTTTCCGAGAATCTATTTTTAGCGAATTTGGCGAATTTCGACA
ATAATTTGAAAAATTAGTTTTCGCCAAGTGTTCGGCAAACCTTCAAACTG
TCTAGAGCTTTCATTTTTGGGCCAGGAGGAAAAATTTATCCTGCAAATCA
CCAAAATTAGTTATCATTAAAATAAATTTCTTTAAAGTAATATTCATATT
TTTCCTATCTTTACAGAAAATTCTTTGATCAACACGATGTGTCATATGTG
CTACAGCAAAACGTATGATTTTGATGACCCAGAGTTCGTCCATATAATGG
GCTACATCAAAATGTCCAATGAAGGTCTAACACCTAACCAAGCCATATCG
ATTTTTCCTTGGCTACAATATTTCCCTGACACCGAAGCACTGAAGAAATT
GAAACTTGCTGTAAAACAAGACACAGAATTCACACGTAAAATGTTTGATG
AACATATCGCAACATTTGATCCTGAGAATATCAGAGATTTTACTGATAAT
CTACTTCATTTTTCACAAAACAAGGAATTATGGAAAGATGCTGGTTTCGA
GACAATCACTCGAGAAGAAATTGAACCTGTGGTAAGTTCACTATTGTTTG
CAGGCGTGGAAACCCAAGCTGCTCTTTTACGTTGGCTTTTCCTCTATATG
ATGCATTTCCCAGAATATCAAACAAAAATCTATGAGGAAGTTGGATCGAA
TGTTGGACTGAAGCGTCGAATATCTCCCGAAGATAAAGATGTCTGTCCAA
TAACTAATGCAATATTACTTGAAACTCATCGCATGGCATCTGTAGGCGCT
CTTAGTCTCCCTCACAAAACGACCGTTGATACTTCAGCCGGGGGTCTTGC
TATTCCGAAGGATACAATGGTCTTTGTCAACCTCTACAGCATACATTATG
ATCCTACACACTGGGATGAACCAGAGAAATTCAAACCAGAGCGTTGGTTG
AATGTTGATGGAAGTTTGAAGAAAGAGAAGCCAACACACTATCTTCCTTT
CTCAGCTGGAACGCGGGTATGTATTGCAGAAAGAATGGCCAAAATGCAAC
TATTCATCATCACTACTAACTTCTTTCGTAATTTTGAAGTTTCAAACGCT
CCAGGAGAAGAATTACCAGGTCTAAAAGACGGCATCTATTGGTCAACCTT
GAATCCACCTCGTCGTAAAATTGTTGTGACGAAACGAAAACATAACTGA Coding sequence (CDS) from alignment at sc0000241_pilon:280639..287837- >XLOC_042353 ID=XLOC_042353|Name=XLOC_042353|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000241_pilon:280639..287837- (Clytia hemisphaerica_ch_hm2_pilon) GGTATGGAACGTGCAGTCATTCTAAATTCATATGACGTCATCAAAGAGGC TTTAATGACCAGAGGTACTGACTTTGCGGGTAGACCCACAACTGACATAC CAAACAAAATAATCAGTAGAAATTTCACAAATATCGCTCACCGGGATTAT TCAAAAACATGGGCGTTTTTGAGAAAAGTTGCGTATAAAAGTTTACATGT CTATGGATCAGGAATGAAGAGGCTTGAAGATTTGATCACAGAAGAAGTGG ACAAAATGTGTTCGGTGTTGTCACGTGATGTTGGGAAACCAGTCTTGATC GACTATTATATCGGGTATGGAACGTGCAGTCATTCTAAATTCATATGACG TCATCAAAGAGGCTTTAATGACCAGAGGTACTGACTTTGCGGGTAGACCC ACAACTGACATACCAAACAAAATAATCAGTAGAAATTTCACAAATATCGC TCACCGGGATTATTCAAAAACATGGGCGTTTTTGAGAAAAGTTGCGTATA AAAGTTTACATGTCTATGGATCAGGAATGAAGAGGCTTGAAGATTTGATC ACAGAAGAAGTGGACAAAATGTGTTCGGTGTTGTCACGTGATGTTGGGAA ACCAGTCTTGATCGACTATTATATCGAAAATTCTTTGATCAACACGATGT GTCATATGTGCTACAGCAAAACGTATGATTTTGATGACCCAGAGTTCGTC CATATAATGGGCTACATCAAAATGTCCAATGAAGGTCTAACACCTAACCA AGCCATATCGATTTTTCCTTGGCTACAATATTTCCCTGACACCGAAGCAC TGAAGAAATTGAAACTTGCTGTAAAACAAGACACAGAATTCACACGTAAA ATGTTTGATGAACATATCGCAACATTTGATCCTGAGAATATCAGAGATTT TACTGATAATCTACTTCATTTTTCACAAAACAAGGAATTATGGAAAGATG CTGGTTTCGAGACAATCACTCGAGAAGAAATTGAACCTGTGGTAAGTTCA CTATTGTTTGCAGGCGTGGAAACCCAAGCTGCTCTTTTACGTTGGCTTTT CCTCTATATGATGCATTTCCCAGAATATCAAACAAAAATCTATGAGGAAG TTGGATCGAATGTTGGACTGAAGCGTCGAATATCTCCCGAAGATAAAGAT GTCTGTCCAATAACTAATGCAATATTACTTGAAACTCATCGCATGGCATC TGTAGGCGCTCTTAGTCTCCCTCACAAAACGACCGTTGATACTTCAGCCG GGGGTCTTGCTATTCCGAAGGATACAATGGTCTTTGTCAACCTCTACAGC ATACATTATGATCCTACACACTGGGATGAACCAGAGAAATTCAAACCAGA GCGTTGGTTGAATGTTGATGGAAGTTTGAAGAAAGAGAAGCCAACACACT ATCTTCCTTTCTCAGCTGGAACGCGGGTATGTATTGCAGAAAGAATGGCC AAAATGCAACTATTCATCATCACTACTAACTTCTTTCGTAATTTTGAAGT TTCAAACGCTCCAGGAGAAGAATTACCAGGTCTAAAAGACGGCATCTATT GGTCAACCTTGAATCCACCTCGTCGTAAAATTGTTGTGACGAAACGAAAA CATAACTGAAAAATTCTTTGATCAACACGATGTGTCATATGTGCTACAGC AAAACGTATGATTTTGATGACCCAGAGTTCGTCCATATAATGGGCTACAT CAAAATGTCCAATGAAGGTCTAACACCTAACCAAGCCATATCGATTTTTC CTTGGCTACAATATTTCCCTGACACCGAAGCACTGAAGAAATTGAAACTT GCTGTAAAACAAGACACAGAATTCACACGTAAAATGTTTGATGAACATAT CGCAACATTTGATCCTGAGAATATCAGAGATTTTACTGATAATCTACTTC ATTTTTCACAAAACAAGGAATTATGGAAAGATGCTGGTTTCGAGACAATC ACTCGAGAAGAAATTGAACCTGTGGTAAGTTCACTATTGTTTGCAGGCGT GGAAACCCAAGCTGCTCTTTTACGTTGGCTTTTCCTCTATATGATGCATT TCCCAGAATATCAAACAAAAATCTATGAGGAAGTTGGATCGAATGTTGGA CTGAAGCGTCGAATATCTCCCGAAGATAAAGATGTCTGTCCAATAACTAA TGCAATATTACTTGAAACTCATCGCATGGCATCTGTAGGCGCTCTTAGTC TCCCTCACAAAACGACCGTTGATACTTCAGCCGGGGGTCTTGCTATTCCG AAGGATACAATGGTCTTTGTCAACCTCTACAGCATACATTATGATCCTAC ACACTGGGATGAACCAGAGAAATTCAAACCAGAGCGTTGGTTGAATGTTG ATGGAAGTTTGAAGAAAGAGAAGCCAACACACTATCTTCCTTTCTCAGCT GGAACGCGGGTATGTATTGCAGAAAGAATGGCCAAAATGCAACTATTCAT CATCACTACTAACTTCTTTCGTAATTTTGAAGTTTCAAACGCTCCAGGAG AAGAATTACCAGGTCTAAAAGACGGCATCTATTGGTCAACCTTGAATCCA CCTCGTCGTAAAATTGTTGTGACGAAACGAAAACATAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000241_pilon | genome | sc0000241_pilon:280639..287837 - |
Properties
| Property Name | Value |
| Aaloc | 316-1296:982 |
| Aaloc | 1-312:7200 |
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