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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:127800..129838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042350 ID=XLOC_042350|Name=XLOC_042350|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2039bp|location=Sequence derived from alignment at sc0000238_pilon:127800..129838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATACCAATGATATTAGAATGGATAACATATCTCCTGTTGGCTGTTGT
TGTATACAATTTGATAGTTTACCTAAACCATGTATATGATTTAAAAGACT
ATCCCCCAGGCCCTTTTCCTCTCCCTTTAATCGGGAACTTGCATTGTATT
GATTTTAAAAGGCCTCATAAAACATATCAAAAACTGACAAAAGCTTATGG
AGATGTATTCTCGATCAGCTTTGGTATGGAGAGAATCGTCATGGTGAATA
CAATAGAACAAGCTAAAGAGGCGCTCGTGACAAAATCTGCTGAATTCGCA
GGTAGGCCATCAAACCACCATGCATTTGCAATGATAACAAGAAATTATCA
AGATTTAGTCTTTGCTGATTATGGTTCACACTGGTTACTAGTTCGAAAAC
TAGCAATCAGGTCCTTAAAAATGTATGCCAATCTAGATGGAAAACTTGAA
GTGAAAGTTGCACAAGAAGTTGAACAAATGAATGGACGATTAATGGAGAA
AACTAATGAACCTGTTAATCTAAACGTGGAAATAAGTAAGTTTTTTTCAG
ACAGTTTCTTTAGAAATTATCTACCGAACGTCTCTAATTTTCTCTGTCAA
AAGTAAAGATATTTGGTCAATGGTTTTAGGGTTAAAGTCAAATAATACAT
GTTTGTTAGGCTATGGTCTACGCCGTTCTAAAAGACTATTTTTCTGACAC
TATCTGCTTGAACACCCCTGTCTCATTTTTCTGACACTATCTACTTTAAG
CGTACAAACTTTCGCGAGGTCGAAAATTCGCGAAATTTATGACATTTACT
TTCGCGAATTTAAGGAAAAAATTTCGTGAATTGGGTGATCAAAATGAAAA
TTTTCACACGAAAAATAGCTTAAGAGTGACAAATGCTTCTCGAATTCGAT
TAAAAACTGGTAATATATGACCTCAATGAGGCTTTCAAGGAATAGAAATG
CTATTTTTTTATTCTGATTTCGAAACTTTACAGATTTTCAACTTTTTCAA
GAATTTTTTGCGAGCATAAACTTTCGCGAATCGCCTTGTTAAGAATTTTC
AAAGACATTTTCTTTCGCGAAAAAGGCCAAAATTCGCAAAAGTCGCAAAA
GTTTAATACTTGAACTACACCCCTCTCTTATTTTTCTGACATTATCTACT
TGAACACCCCTGTCTCATTTTTCTGACATTATCAACTTGAACACCCCTGT
GAGGTGACTCTGAATAAAATCAAATTTTGAGATAAAAAAACTCACTGGGG
TTGAAATTTTTACCTTCACCGGGATAGGGAGGAATATTTTCCTTGAGTTC
AAACTATAAAACTGATAACCTTAGTATACTTTGGCGTTTTGGCTCCATCC
CTCTTAAGATTAGATTTAATTATAATAATTGTGAGTGGGATGTCATCATG
TCAAAAATCTTTTAAAAAAGTCGAAAATGAAGATGAAAAATGAATAAGAA
AAAATCAACTCCTGGTAGAAAAGCTTACAGTATTGAATGGATTAATTTTT
TCCCACTTTTAGGGTTGTTCATGACAAATATTATCTCCACAATAGTACTT
GGTGAAAGATACGAAAATATAGAAAACCCCACATTTCAAAAGATATTAGA
ATTAAATAACTATTTACATTATGCTGTATATCATGGTGATCCTATTTCAA
TTTCAAAATGGCAGAAATATCTTCCTATCCACTCGACTAGAATGTTATCA
AGCTACTTAGCAAAGAGAGATGAACATTTCAGAAATGTTTTTAACAAACA
TAAGACGAACTTGAAACCGGAAATGTTGAAAAATATGTTGGACTTGTTTA
TCCATACATCTAGTGATGAAGAGTTTCTTAAAAAAAATGGAATAAGCGAG
TTAACACGTGACACGATTGAAATGGTGATGATGGACCTCCTTGATGCAAG
TGTTGACAATACAGCTGTAACTCTTTCTTGGATAGTTTTGTACTTATTAC
ATCATCCAAAATACATGAGAGAGGCTTACAATGAGATTAAACACATGGTT
GGTGCAAAAAAATACCCAAAGATGAGCGATCAGTCCTCA Coding sequence (CDS) from alignment at sc0000238_pilon:127800..129838- >XLOC_042350 ID=XLOC_042350|Name=XLOC_042350|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1854bp|location=Sequence derived from alignment at sc0000238_pilon:127800..129838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATACCAATGATATTAGAATGGATAACATATCTCCTGTTGGCTGTTGT
TGTATACAATTTGATAGTTTACCTAAACCATGTATATGATTTAAAAGACT
ATCCCCCAGGCCCTTTTCCTCTCCCTTTAATCGGGAACTTGCATTGTATT
GATTTTAAAAGGCCTCATAAAACATATCAAAAACTGACAAAAGCTTATGG
AGATGTATTCTCGATCAGCTTTGGTATGGAGAGAATCGTCATGGTGAATA
CAATAGAACAAGCTAAAGAGGCGCTCGTGACAAAATCTGCTGAATTCGCA
GATGATACCAATGATATTAGAATGGATAACATATCTCCTGTTGGCTGTTG
TTGTATACAATTTGATAGTTTACCTAAACCATGTATATGATTTAAAAGAC
TATCCCCCAGGCCCTTTTCCTCTCCCTTTAATCGGGAACTTGCATTGTAT
TGATTTTAAAAGGCCTCATAAAACATATCAAAAACTGACAAAAGCTTATG
GAGATGTATTCTCGATCAGCTTTGGTATGGAGAGAATCGTCATGGTGAAT
ACAATAGAACAAGCTAAAGAGGCGCTCGTGACAAAATCTGCTGAATTCGC
AGATGGAAAACTTGAAGTGAAAGTTGCACAAGAAGTTGAACAAATGAATG
GACGATTAATGGAGAAAACTAATGAACCTGTTAATCTAAACGTGGAAATA
AATGGAAAACTTGAAGTGAAAGTTGCACAAGAAGTTGAACAAATGAATGG
ACGATTAATGGAGAAAACTAATGAACCTGTTAATCTAAACGTGGAAATAA
GGTTGTTCATGACAAATATTATCTCCACAATAGTACTTGGTGAAAGATAC
GAAAATATAGAAAACCCCACATTTCAAAAGATATTAGAATTAAATAACTA
TTTACATTATGCTGTATATCATGGTGATCCTATTTCAATTTCAAAATGGC
AGAAATATCTTCCTATCCACTCGACTAGAATGTTATCAAGCTACTTAGCA
AAGAGAGATGAACATTTCAGAAATGTTTTTAACAAACATAAGACGAACTT
GAAACCGGAAATGTTGAAAAATATGTTGGACTTGTTTATCCATACATCTA
GTGATGAAGAGTTTCTTAAAAAAAATGGAATAAGCGAGTTAACACGTGAC
ACGATTGAAATGGTGATGATGGACCTCCTTGATGCAAGTGTTGACAATAC
AGCTGTAACTCTTTCTTGGATAGTTTTGTACTTATTACATCATCCAAAAT
ACATGAGAGAGGCTTACAATGAGATTAAACACATGGTTGGTGCAAAAAAA
TACCCAAAGATGAGCGATCAGTCCTCAGGTTGTTCATGACAAATATTATC
TCCACAATAGTACTTGGTGAAAGATACGAAAATATAGAAAACCCCACATT
TCAAAAGATATTAGAATTAAATAACTATTTACATTATGCTGTATATCATG
GTGATCCTATTTCAATTTCAAAATGGCAGAAATATCTTCCTATCCACTCG
ACTAGAATGTTATCAAGCTACTTAGCAAAGAGAGATGAACATTTCAGAAA
TGTTTTTAACAAACATAAGACGAACTTGAAACCGGAAATGTTGAAAAATA
TGTTGGACTTGTTTATCCATACATCTAGTGATGAAGAGTTTCTTAAAAAA
AATGGAATAAGCGAGTTAACACGTGACACGATTGAAATGGTGATGATGGA
CCTCCTTGATGCAAGTGTTGACAATACAGCTGTAACTCTTTCTTGGATAG
TTTTGTACTTATTACATCATCCAAAATACATGAGAGAGGCTTACAATGAG
ATTAAACACATGGTTGGTGCAAAAAAATACCCAAAGATGAGCGATCAGTC
CTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:127800..129838 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 403-927:526 |
| Aaloc | 304-399:1602 |
| Aaloc | 1-300:2040 |
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