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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:437824..440551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042310 ID=XLOC_042310|Name=XLOC_042310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2728bp|location=Sequence derived from alignment at sc0000007_pilon:437824..440551- (Clytia hemisphaerica_ch_hm2_pilon)
AACAAGACAGATTTGCAAAGGAGAGCTGTTCTTTACCATAATGTCATTAA
CAAAACATTCGATCTTGCCAAAGAACAGTACTCGACATTTGACGACCTTG
AATATCTAAGTTTTGATGTTTGTCAAGATCGTGATCTGCTGCTTCGTCTA
ACAACCACGTTTATATTGGATCTTGAAATGAATATACATTTTAATGCTTC
TTTAATCGGTTCTAGGAAAATTGCCCCCGAGAAAATTGCCCCCCGGAAAA
CTGCCCCCGGAAAATTGCCCCCCGGAAAATTGCCCCCTAGGAAAACTGCC
CCCTAGGAAAATTGCCCCCCAGAAATTGCCCCCCAGAAAATTGCCCCCTA
GGAAATTGCCCCCCGGAAAATTGCCCCCCCCCCGCCATCTTTTTTTCCAC
TTTTTTATAAAATCCAATGAAACTTCAAATGGCCATTGTAGCTGTAAAAT
TAAGTATTTTTGAATTACTCTTAGGGTACCTAGTAAACGGGGGTCAGCGG
GGGTGGATTGGAAAAAAGGCTAAAACAGCATAATCCGTACAAAAAAGAAG
TTTCAGATTCCGAAAAATTGATAAGCGGAGGAGGGGTTGGATCAACAATG
TCCTTGGTAGAAAATTTTCGAAAAATAGATTATTTTGGTGGGAACTTTTT
TGGGGGAATACTGTAATTAATTTTTTAACTGTGGTTGGAATTAATTTTAG
CGAATGACAGCGCAAATCTGTTCTATTTCATCTTATTTTGAGCAACTTTG
TTGAATTTCAGGGGTTATTTAGCCAAGAAAACTGAAATTTTAATTTTGGT
GGGAACTTATTTTGGCGAGTTAGTAAAAATTAGTTCCCTTAGCTTAAGAT
AGCACGGATAGGGCGCTTAGGGTTAAGAAATGGGGAAAGATTTTTTTGAA
AGTGATTTTATTACTCGACTATCTTTCTCCACCTCATACAAAACTTGTAA
AAGTCGTTTTTGAGGCGTCTTTTTTCTTTAAGAAAAAACTAAAAACTAAA
ACATGCAAAGCAGATCAATGGTCAGCGTGAGGAATATAGTAAGAATGAAG
TTATCCATTCCATATGAACAAGAAATTTGGTAAAACCATAAAGAAAATAC
TTGAATAGCGAAAGAAATACAGTATAAAACTGTATTCCATGGTTAAACCA
CATTATTCCTTATAAAAAGCGTCAACTTAATGAAAATTACGGCTGCAACC
TGCAACCGTTGGACCAAAATATAGCCCCAAAATATTCTAGATCTCTTAAT
CCGTTAAGACGCGATCACGTAAAATTGCGTAATCCAAAATCTCCCGAATG
TTGAAAATTGAGTTAGATTTAGTTTCGAAAAATGGAAAAATAGGGGGCAA
TTTTCCGGGGGGCAATTTTCCTAGGGGGCAATTTTCTGGGGGGCAATTTT
CTGGGGGGCAATTTCCTAGGGGGCAATTTTCCGGGGGGCCGTTTTCCGGG
GGGCAATTTTCCGGGGGGCAGTTTTCCGGGGGGCAGTTTTCTCGGGGGCA
ATTTTCCTGACACCCTTTAATCGAATTCAACAATAGAGGAGTCATTAATT
GGAGACATCTTAATATTAGAAATAAAAACACAATCTCTTTTTTTGTAGTT
TACATGGATAAAGAAATGACCGAATTATTTTCAAAGTTGATAAGGGCAAG
ACAATTTTCAAATGTCCTAATTTTAAATCAAAACAGTAGAATAGGTAGTT
TCGAGGATATAAGCCTGAAGAGCGTTATTTTTACTTTAGTTGACTTTTTA
GAGCTAGAATCGAACATTTTTGCTAAGCACATGGAAATCTTTAGATGGAA
GCGTTTCGGGTTATTCCTTTTAAAAGGATCAAAACGAGATTCCAGTGAGT
ATTACTTAAACATGCATCGAAGGTTCATTGACACGATTAGCCAACAAGAC
CTTTTTGATACTTGCTATTTTACGGATACTATTGACATTCAAAATTCCAC
CAACTTTACCAGAGCTGTCGACATTTTACATCAAGATTTATCGCACAATG
TTTTGGTATTGTTTGGCAATCCTCATGATCAAATGAAGTTTGTGAAAACT
GTCAACATTTTTTCTTATACAAATTTTATCTGGTTTACTCACGACCTTAC
AGACTCTATGATAAAATCAGCTTTCCCATTTCGTGATCGAGAAGAAATCA
TGATTTTCAACTACCAAACCAAAATGCGTCAATTAATCGTAAAAAATCGA
GAAGAATTCAAAAAGCAAATGTCTCTACCTGAAGAATACTTTGAACAAAA
TAAAACAGTGGTCGAAACAGCATTTACCTATTTTGATCGGGTCTTTGAAA
TGATTGATGAAAAGGGCACAGCAAGCATAAAACCTATTTTAAAATTCCCC
CTTTCAAACGTTGGCGTGGTTTTTATTAGAAAGAGATCACGTTCGTTCAT
ATATACAATGCGCTTCGTCGACGAGGAAGTGTTGGCCTACGAACTGAAGG
AAATAAATATTATATTATTAAGAGAATTTTTCATTGAAACTACATGTGAA
TCATATCAGTGTTATCCAGGCTGGGAACAAAGCAGAGGACAACGTTTGAA
GCAATTCACGAAATGGAATTCCGAGTATGGTTTTACTTGTAAACAATGTC
AACAAAATTTCATCAAATTCAACAGAGGAAATGTTGAAAAATGTCAGAAA
TGTCCTCGTTATTATCTTTCCAACAAAAATTACACTGAATGTTTTGACCC
GTACCGTAAGGAATTTCTGGTAAAAAGC Coding sequence (CDS) from alignment at sc0000007_pilon:437824..440551- >XLOC_042310 ID=XLOC_042310|Name=XLOC_042310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2826bp|location=Sequence derived from alignment at sc0000007_pilon:437824..440551- (Clytia hemisphaerica_ch_hm2_pilon)
AACAAGACAGATTTGCAAAGGAGAGCTGTTCTTTACCATAATGTCATTAA
CAAAACATTCGATCTTGCCAAAGAACAGTACTCGACATTTGACGACCTTG
AATATCTAAGTTTTGATGTTTGTCAAGATCGTGATCTGCTGCTTCGTCTA
ACAACCACGTTTATATTGGATCTTGAAATGAATATACATTTTAATGCTTC
TTTAATCGAACAAGACAGATTTGCAAAGGAGAGCTGTTCTTTACCATAAT
GTCATTAACAAAACATTCGATCTTGCCAAAGAACAGTACTCGACATTTGA
CGACCTTGAATATCTAAGTTTTGATGTTTGTCAAGATCGTGATCTGCTGC
TTCGTCTAACAACCACGTTTATATTGGATCTTGAAATGAATATACATTTT
AATGCTTCTTTAATCGAATTCAACAATAGAGGAGTCATTAATTGGAGACA
TCTTAATATTAGAAATAAAAACACAATCTCTTTTTTTGTAGTTTACATGG
ATAAAGAAATGACCGAATTATTTTCAAAGTTGATAAGGGCAAGACAATTT
TCAAATGTCCTAATTTTAAATCAAAACAGTAGAATAGGTAGTTTCGAGGA
TATAAGCCTGAAGAGCGTTATTTTTACTTTAGTTGACTTTTTAGAGCTAG
AATCGAACATTTTTGCTAAGCACATGGAAATCTTTAGATGGAAGCGTTTC
GGGTTATTCCTTTTAAAAGGATCAAAACGAGATTCCAGTGAGTATTACTT
AAACATGCATCGAAGGTTCATTGACACGATTAGCCAACAAGACCTTTTTG
ATACTTGCTATTTTACGGATACTATTGACATTCAAAATTCCACCAACTTT
ACCAGAGCTGTCGACATTTTACATCAAGATTTATCGCACAATGTTTTGGT
ATTGTTTGGCAATCCTCATGATCAAATGAAGTTTGTGAAAACTGTCAACA
TTTTTTCTTATACAAATTTTATCTGGTTTACTCACGACCTTACAGACTCT
ATGATAAAATCAGCTTTCCCATTTCGTGATCGAGAAGAAATCATGATTTT
CAACTACCAAACCAAAATGCGTCAATTAATCGTAAAAAATCGAGAAGAAT
TCAAAAAGCAAATGTCTCTACCTGAAGAATACTTTGAACAAAATAAAACA
GTGGTCGAAACAGCATTTACCTATTTTGATCGGGTCTTTGAAATGATTGA
TGAAAAGGGCACAGCAAGCATAAAACCTATTTTAAAATTCCCCCTTTCAA
ACGTTGGCGTGGTTTTTATTAGAAAGAGATCACGTTCGTTCATATATACA
ATGCGCTTCGTCGACGAGGAAGTGTTGGCCTACGAACTGAAGGAAATAAA
TATTATATTATTAAGAGAATTTTTCATTGAAACTACATGTGAATCATATC
AGTGTTATCCAGGCTGGGAACAAAGCAGAGGACAACGTTTGAAGCAATTC
ACGAAATGGAATTCCGAGTATGGTTTTACTTGTAAACAATGTCAACAAAA
TTTCATCAAATTCAACAGAGGAAATGTTGAAAAATGTCAGAAATGTCCTC
GTTATTATCTTTCCAACAAAAATTACACTGAATGTTTTGACCCGTACCGT
AAGGAATTTCTGGTAAAAAGCAATTCAACAATAGAGGAGTCATTAATTGG
AGACATCTTAATATTAGAAATAAAAACACAATCTCTTTTTTTGTAGTTTA
CATGGATAAAGAAATGACCGAATTATTTTCAAAGTTGATAAGGGCAAGAC
AATTTTCAAATGTCCTAATTTTAAATCAAAACAGTAGAATAGGTAGTTTC
GAGGATATAAGCCTGAAGAGCGTTATTTTTACTTTAGTTGACTTTTTAGA
GCTAGAATCGAACATTTTTGCTAAGCACATGGAAATCTTTAGATGGAAGC
GTTTCGGGTTATTCCTTTTAAAAGGATCAAAACGAGATTCCAGTGAGTAT
TACTTAAACATGCATCGAAGGTTCATTGACACGATTAGCCAACAAGACCT
TTTTGATACTTGCTATTTTACGGATACTATTGACATTCAAAATTCCACCA
ACTTTACCAGAGCTGTCGACATTTTACATCAAGATTTATCGCACAATGTT
TTGGTATTGTTTGGCAATCCTCATGATCAAATGAAGTTTGTGAAAACTGT
CAACATTTTTTCTTATACAAATTTTATCTGGTTTACTCACGACCTTACAG
ACTCTATGATAAAATCAGCTTTCCCATTTCGTGATCGAGAAGAAATCATG
ATTTTCAACTACCAAACCAAAATGCGTCAATTAATCGTAAAAAATCGAGA
AGAATTCAAAAAGCAAATGTCTCTACCTGAAGAATACTTTGAACAAAATA
AAACAGTGGTCGAAACAGCATTTACCTATTTTGATCGGGTCTTTGAAATG
ATTGATGAAAAGGGCACAGCAAGCATAAAACCTATTTTAAAATTCCCCCT
TTCAAACGTTGGCGTGGTTTTTATTAGAAAGAGATCACGTTCGTTCATAT
ATACAATGCGCTTCGTCGACGAGGAAGTGTTGGCCTACGAACTGAAGGAA
ATAAATATTATATTATTAAGAGAATTTTTCATTGAAACTACATGTGAATC
ATATCAGTGTTATCCAGGCTGGGAACAAAGCAGAGGACAACGTTTGAAGC
AATTCACGAAATGGAATTCCGAGTATGGTTTTACTTGTAAACAATGTCAA
CAAAATTTCATCAAATTCAACAGAGGAAATGTTGAAAAATGTCAGAAATG
TCCTCGTTATTATCTTTCCAACAAAAATTACACTGAATGTTTTGACCCGT
ACCGTAAGGAATTTCTGGTAAAAAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:437824..440551 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 211-1413:1204 |
| Aaloc | 1-207:2729 |
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