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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:432430..436273+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042290 ID=XLOC_042290|Name=XLOC_042290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3844bp|location=Sequence derived from alignment at sc0000007_pilon:432430..436273+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTCTGCATCAAGAAAtgtgttgaaaacaaaacaccATATCCTAAA
TGTATTAAAGACTGGTAAGTAAttgattttctcttttgttttataTACAC
CCAAAAATGGCCTAGTTCTAAACCCCGGTTGGATAACGAGTAAACCCGGT
CAACATTAGAGTAGTTGTGAGATtaacccccggggggggtactcagGCAA
ATGGAGGAtatggtatgtgccgcccttaagggtaccttttttggacttcc
aaagtcccgctaagggtctgaaaaatcagaaaatcaaatttcagtcccac
tgagggtcgaaaaattggaaaatttcaactttttaccccctgaaagatcg
aaatttggtcaaatttgtcccgctaagggtcgcaaaattcccaaaatttt
cctttgttttctcctctttagtcccggtaagggtccaaagttcgaaagtc
gggcggcaccccccccccccgtcagctcgcaaccctagtacccccccggg
gatTAACCTAACTCGAAGAAATTTGGCAAATAACCTTCTCTTTTCTAAAA
GCTTCCAGGGGAGGGAGCAAACGAGGGTTTTGATTTCCGAAATACTGAAG
AATTTTGTCGTGATTTCCGAAATTTTTTGTAGGCTCCCCATATCTTTGAA
ACACTGTGCAGTAAAAATCTTTACTGatagattttcagatttttgttaAC
CAATAAACAAAATTTTGCCCATTCAAATTCGTTTCTTTAAGGCTGGGGGA
GACAGAAGACAAAAACGTCCTTGCCATCAATATATATAataaagaaatca
tagcatgaaTCTCCAAGCCACAGCACGGGATGTATAGTTTTTCTTGGTTT
TCTGGAGAAGCTCAATGTTCGATTTTTGTTCCCTTATATCACATACACTA
ATcactattttaatttttttttattgaaatcttttttaccACCGAAATAC
TCGGTATATATTTAATGAActttattgttttaaaactttttaaagcaCGA
ACTGTTATGGTTAGAAACatcaatcaaaatggtttgttCGCTCGTGGTCC
TTGGTCTAGTTAAAACTAAGCAACTATTAACTTTCATGATTTGAAAGAAA
GAGAAATCAGGTCTTTAGTGGCAAGATTTTGAAACAGGGGGCTCTCAAGA
ATAATCTAAATTTTGGGATAGTAGATGGCACAATAAAGTTCCATAAGGGG
ccccccagtggtttgcgtgaatgcgtgattttcggttgcgtgaatgcgtg
aaaattgggaaaaaaatgtGTGAATGCCTGAATTAacaaaacttgcgtga
acgtgaaaattcgctctttgattgcgtgaatgcgtgaatctgggctattt
tttgcgtgaatacgtgaattttcccttttttccaccgatcatgtgtagtt
ttcccgattttccaatgttcccccgatttttcccgaaaattttccgattt
cctgcaaaaatcgggttattgcgtgaattgagggtccacTGGGGGAGCCT
CCATAAGCCTATCATAATAAGACACTGTGGTattatttacaataaaataa
atGCAGAACACTTCAATTGAAGTGTTTAGAAGGTTTATAATAAGACCTTG
ATATCAAAACCCTTGGTGggttaatttttatttaatgaATATATTcctga
tatatttttcaagtaaataTGTTTTGAATCCATCCTCCAAACCCACACGG
TTAACTTATTAttgccgccatctttaaaaaagcatttaacGAAAACACTC
TAGTAAAGACCAATTAGCACGGAAGCATTCTTCAATATTTTCCCATTTCT
CAATGGCTTCGTcataaaaagtatataaaaaattatactGACCAAAAGCG
ATTTGTTATGtttgagataaattttttttttcaagtttcgATTGTGCATC
TACTATGAAGAACTTTATAAGAAGTATTGCGGTTCAGAATCTGATTCTTC
CGTAGGTGGATAAAGTAAAAAGCTATTATACTAAAAATGTATAAAGTAGA
GTATTTTTTAAGATTGCTTTCATTTCAAAGTATTCTCTTATATGCTTCAT
ACTTAAGGTTAAACTACCTATCtacttcatcattttcaaaatgtgtACTT
TAAAGTTTACACGTTAAGAGAGCgatcagaaaaatatatttctgtGGCGC
AATCCGTAAAATACCGGTTTTGTGGTTTTTGAGATTCCGGATCtttgata
ttgaatttttcGAGTTATGTGCATTTTAAACGAAATAGATGGAAATAGGT
TTATATGCAAGTTTCACTCTTATTTGCGTCCAGGAAAGTTTGAATTTGCG
ACCTAAACATTCCCCGAAAGTCAGAATTTCGACGCCAGTAGGGGTATGTT
TTTAGACGGTTTTTAGCGTTTAGCATGAACTTTTTTGCCTAAGGCACATT
GATAAGATTGGATTTTTGAGTCAGGCAGACTTCTCTACAAAGGGACAGGG
GTGACAAAAGGTTTGATCTCCTCAACATGTAGTACGTGTACGGTATTCTT
TCTGTAAAAGCTCATTTTTACTTGTTATTCGTTACAGGAATGGCAAATAT
AGACGAACAGATTGGCATCATCATGCATATCTTGGGATGTATTTCCCATA
TTGCTGGCTGCTATATTCTTCTCAACACAAGCCATTCAAATCATCTCATG
GATTCACAGAGATTATATCTAATCTACTTAAGCATTTCAGAAGGACTTTA
TTGTCTTGCCTTCACTTTATTCTATATTGGTCTCGGCTACCAGCTCCCAT
CATTGAAGAACTTCTCTTTCATCATTGGCAgtggattttatcttttctaC
ATTTGCATCATAATGCTTTTGACGATGGATCGAGTCTTAAATGCAAGAAT
GCATCGTACCTATCTTGCACTGTGGTCAAGGAAAAGAGCACATCTTTCAG
CCTGCTGTTCTGGAATCTTAGCTCTGGCTACAACCATTGTCTCCATTATC
ATGCtcccaaattttgaaatatcatttaAAATTATGTCGCTTTACATTTA
TCCTACTATCGGTTTTACCTGTGTTTTCTTTCTCATCTTTAGCTACGTct
atctttttcacaaaatccgTTCGTTTAGAATCTGTTACATTGCCCCGATG
ATTGTGATCAGTCCAGTTCAAGTTGTCAATAAGGAATCAAGTGTTAATCA
AGACAGTGGAAGTCAATCGACAGTCGATAATAACCAGCAAATTGAACGAA
ACAATCCTGGAAGATTGGAAGACGATCAAAGTCAACAATCAAGACGAAAT
CAAGGGAGATTAGAGAATCAAGCTTACGAAGAAGAGTTGAGGCCAGAGTT
TGAAACGTCTGAAATTCATGGAGCCGAGGAAGAAGACAATGGGCTACCTA
CTCATCAGAATAACAACGTGAAACGTGAGCAAGTAAGAGGACAAAGGCGA
AATCAACGGAACTTAGCATATGAAGAAGGGTTAAAATCAGAGTTTGAAAC
ATCTGAAATTCATGGAGCCGAGGAAGAAGATAATGAGCGACCACGGCAAT
CTTCTAGTGATCAAAACGGACATGAGCAAAGTAGAGGACAAAAACGGCAG
CAGCAACAACAGCAACAGGTCAACAGAATTTATGAACATCTTAAAAGAAG
TATTTGTGTCCCTGTACTTCTAGTCTTGACATACATTGTATTTTACATCA
TCCCTGACCAAATGCACTTCTGGATGCATTTAGCAAACAAGGAGCTCTCA
GGAGAAGTACTGATCCTTTTTGGGGTTCTTTATCCGATGTCACCAATTTC
TGATGCAttcatatatattttctttagaAGACAATCAAGacaatttttaa
aaagacaattattaagatttttagagagtgttgatttacgttaa Coding sequence (CDS) from alignment at sc0000007_pilon:432430..436273+ >XLOC_042290 ID=XLOC_042290|Name=XLOC_042290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2742bp|location=Sequence derived from alignment at sc0000007_pilon:432430..436273+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTCTGCATCAAGAAAtgtgttgaaaacaaaacaccATATCCTAAA
TGTATTAAAGACTGATGATTTCTGCATCAAGAAAtgtgttgaaaacaaaa
caccATATCCTAAATGTATTAAAGACTGGAATGGCAAATATAGACGAACA
GATTGGCATCATCATGCATATCTTGGGATGTATTTCCCATATTGCTGGCT
GCTATATTCTTCTCAACACAAGCCATTCAAATCATCTCATGGATTCACAG
AGATTATATCTAATCTACTTAAGCATTTCAGAAGGACTTTATTGTCTTGC
CTTCACTTTATTCTATATTGGTCTCGGCTACCAGCTCCCATCATTGAAGA
ACTTCTCTTTCATCATTGGCAgtggattttatcttttctaCATTTGCATC
ATAATGCTTTTGACGATGGATCGAGTCTTAAATGCAAGAATGCATCGTAC
CTATCTTGCACTGTGGTCAAGGAAAAGAGCACATCTTTCAGCCTGCTGTT
CTGGAATCTTAGCTCTGGCTACAACCATTGTCTCCATTATCATGCtccca
aattttgaaatatcatttaAAATTATGTCGCTTTACATTTATCCTACTAT
CGGTTTTACCTGTGTTTTCTTTCTCATCTTTAGCTACGTctatctttttc
acaaaatccgTTCGTTTAGAATCTGTTACATTGCCCCGATGATTGTGATC
AGTCCAGTTCAAGTTGTCAATAAGGAATCAAGTGTTAATCAAGACAGTGG
AAGTCAATCGACAGTCGATAATAACCAGCAAATTGAACGAAACAATCCTG
GAAGATTGGAAGACGATCAAAGTCAACAATCAAGACGAAATCAAGGGAGA
TTAGAGAATCAAGCTTACGAAGAAGAGTTGAGGCCAGAGTTTGAAACGTC
TGAAATTCATGGAGCCGAGGAAGAAGACAATGGGCTACCTACTCATCAGA
ATAACAACGTGAAACGTGAGCAAGTAAGAGGACAAAGGCGAAATCAACGG
AACTTAGCATATGAAGAAGGGTTAAAATCAGAGTTTGAAACATCTGAAAT
TCATGGAGCCGAGGAAGAAGATAATGAGCGACCACGGCAATCTTCTAGTG
ATCAAAACGGACATGAGCAAAGTAGAGGACAAAAACGGCAGCAGCAACAA
CAGCAACAGGTCAACAGAATTTATGAACATCTTAAAAGAAGTATTTGTGT
CCCTGTACTTCTAGTCTTGACATACATTGTATTTTACATCATCCCTGACC
AAATGCACTTCTGGATGCATTTAGCAAACAAGGAGCTCTCAGGAGAAGTA
CTGATCCTTTTTGGGGTTCTTTATCCGATGTCACCAATTTCTGATGCAtt
catatatattttctttagaAGACAATCAAGacaatttttaaaaagacaat
tattaagatttttagagagtgttgatttacgttaaGAATGGCAAATATAG
ACGAACAGATTGGCATCATCATGCATATCTTGGGATGTATTTCCCATATT
GCTGGCTGCTATATTCTTCTCAACACAAGCCATTCAAATCATCTCATGGA
TTCACAGAGATTATATCTAATCTACTTAAGCATTTCAGAAGGACTTTATT
GTCTTGCCTTCACTTTATTCTATATTGGTCTCGGCTACCAGCTCCCATCA
TTGAAGAACTTCTCTTTCATCATTGGCAgtggattttatcttttctaCAT
TTGCATCATAATGCTTTTGACGATGGATCGAGTCTTAAATGCAAGAATGC
ATCGTACCTATCTTGCACTGTGGTCAAGGAAAAGAGCACATCTTTCAGCC
TGCTGTTCTGGAATCTTAGCTCTGGCTACAACCATTGTCTCCATTATCAT
GCtcccaaattttgaaatatcatttaAAATTATGTCGCTTTACATTTATC
CTACTATCGGTTTTACCTGTGTTTTCTTTCTCATCTTTAGCTACGTctat
ctttttcacaaaatccgTTCGTTTAGAATCTGTTACATTGCCCCGATGAT
TGTGATCAGTCCAGTTCAAGTTGTCAATAAGGAATCAAGTGTTAATCAAG
ACAGTGGAAGTCAATCGACAGTCGATAATAACCAGCAAATTGAACGAAAC
AATCCTGGAAGATTGGAAGACGATCAAAGTCAACAATCAAGACGAAATCA
AGGGAGATTAGAGAATCAAGCTTACGAAGAAGAGTTGAGGCCAGAGTTTG
AAACGTCTGAAATTCATGGAGCCGAGGAAGAAGACAATGGGCTACCTACT
CATCAGAATAACAACGTGAAACGTGAGCAAGTAAGAGGACAAAGGCGAAA
TCAACGGAACTTAGCATATGAAGAAGGGTTAAAATCAGAGTTTGAAACAT
CTGAAATTCATGGAGCCGAGGAAGAAGATAATGAGCGACCACGGCAATCT
TCTAGTGATCAAAACGGACATGAGCAAAGTAGAGGACAAAAACGGCAGCA
GCAACAACAGCAACAGGTCAACAGAATTTATGAACATCTTAAAAGAAGTA
TTTGTGTCCCTGTACTTCTAGTCTTGACATACATTGTATTTTACATCATC
CCTGACCAAATGCACTTCTGGATGCATTTAGCAAACAAGGAGCTCTCAGG
AGAAGTACTGATCCTTTTTGGGGTTCTTTATCCGATGTCACCAATTTCTG
ATGCAttcatatatattttctttagaAGACAATCAAGacaatttttaaaa
agacaattattaagatttttagagagtgttgatttacgttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:432430..436273 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 67-1371:2540 |
| Aaloc | 1-63:1 |
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