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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:360298..363244+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042288 ID=XLOC_042288|Name=XLOC_042288|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2947bp|location=Sequence derived from alignment at sc0000007_pilon:360298..363244+ (Clytia hemisphaerica_ch_hm2_pilon)
ACAACTGAAGCGACAACGGAAAGTACAGAAGCGACGACAGAAAGTACAGA
AGCCACAACGGAAAGTACTGAAGCCACAACGGAAAGCACAGAGGCAACGA
CGGAGAGCACAGAGGCGACAACGGAAAGCACAGAAGCGACAACTGAATCA
ACAGAGGCAACTACAGAATCAACAACCGACGGTAATCCACCTCAACCAAA
TTGTGCTgtttgtcaaaacaaaaacaacgaTGAAGATTGTAGGTGTATCG
GGAAAGACACTCCAGAATCCATTCCAAAAGCAAACACACCAAAGCTTGTC
ATGATTTCATTTGACGATGCTGTTACGGATCTAAATTATGCTTTATATgc
agaactttttgatgatCGTAAAAATCCCAATGAATGTCCGATATCAACGA
CTTATTTCGTGTCCGATGCAAATACAATCTATAATCGAGTCAGAAATCTT
GCTGAGAAAGGTAATACACTGTTTTGTCAAAGCATCTAGAGTTGAAGTAG
AAAACCTTTACTTCTTTGTACCTGTTTCAATTACGGTTTTCATCGCAAAA
GCTCTTTCATGGGTCCAAAACCATCGTCTGCTTTCATAAATTCTATCCCT
TTTGGCCAAGAAAAAGTGGTCTGAAAAGGTTGACTTTTGTGAGTTTATCC
GATAATCCTTTAATTTCAGATTCGTAAATCATACAAGGCTAGCCAATACT
AAGGCGAAAGATTATTGttcaatcttttcttttcatacAGGTCATGAAAT
AGCAGTCCATACAATATCTCACCGAACACCAACAACATTCTGGGCGTCCG
CCACCCGCCAACAACTGATCGAAGAAATTGTTGGaatgaaagaaaaactt
gaAGACGAAGGAATCGAGAATGTGTTAGGATATCGAAATCCATTTTTACA
AACGGCTGGAGATCGAACGTTTCAAGTATTACACGAAAATGGGTTTTTGT
ATGATTCAACATTACCCGTTCTTTTTGATAAGCAATATTGGCCATATACA
TTCGATAATGGTGGACCTTCACAATGTGTTATCAACCCTTGTCCAACCAG
TAAGTAAATACAGACCCTGTGGAATTTTTTCCACCCATAGTAGGATCAGG
ATGAATATCTATCGACATTCCAACGGGGATAGAAATTGTATTATTCTAAG
GTTATGAAAATCTGgtagggatggttttggagtgcaattttttgggGATA
AAGTCATTTTCCAGTGGCACTACAGTTTTAGTGTatgggacgaaattttt
gccaggTTTTCCAGTAGGGCGGGTCTGTGAAAACATTGGGTATTAATTAT
GTTTGTGGTGAGCCTGTGACTTaaaaaaaCTCTCTTTTAAGGGAGCGGTC
ATTAATAGTATAGCATTACCGGGGTGGAAGGGAtttttttGGCAGACTTC
TTATTTTCATACCCTACCAAAAGTtctcaaataaatttcataccCTACCA
AAGTTGGATGAAAATTTTCGTACCCTACCCCATACCAGATGGCAGCTTAA
GTAATAATTTTATACCCAACATTTTTAGATTAGCTTGCAAATTGTCTTTC
GTTTAACATTCCCCATCTGAAATTTCGACGTTCCAGAAGGAACATTGTTT
TTACAAATCTTTTTTAGCAGTTCTGATCTatacatgaaaataaatcaCTC
TGCAAAGTTTAAGGCTAAATGGTATACTTGAGCcctttttatggcacttt
taaAATTTCTCAGATTTCAGGGTTTCCAAGAATAATAATcgacaaaattg
aaatttttgttaaaataatattcagctcaaaatattttcgtacCCTACCC
AAAGCCCTCAAGTCTTTTTCATACCCTAACCAAAAGAGGGAAAAGAAATT
CCTGCCCTACCCAAATCCCTTCCACCCCGGTATATATATGctatacttaa
tgaccgctcccTAACAAGTCTTTAAGAAATGACAGCCTACCCCGGCAGAC
CAAATTCtgtttcaaatatttaaaaattatgtgTGCTTGGAAAttgatgt
ttgaaatttttccattACATAGACCAAGCccaattctaattttttttaat
gctaAACTCAAagatatcttttttattttggctgTTTTACCTCGTGTTGG
TCACTttataactcaaatgtctcctccCAGCTggcgcacaacgttgtttt
aacgtttaaataacgttcacaacgtcaatataacgttaaatgaacgttga
aacaacgttcaGTGCCAGCTGGGGGTTAAGTGAAACAAGTTTTCTCTTCT
CTTCAATTGTTAATACCAATGTAATATTACATGTTAATCAACaacattta
atttaattttaggCTCATTCCCAGGACTTTGGGAGATTCCAATGCTTCAA
ATGAGAGATACAGCTGCAACATGCTCAATGTTCGACGCTTGCCACAGATA
TAGTAGTCAGACTGAAGATGgagttttcgaatttttcaaaacaaactttg
atCGACATTACGAAACATACACGGCGCCTTTTCCTTTGTTTACACATGCT
TCCTGGATGATGCATCCTGCTTTTGCGTTCAGGAAAAATGGTAAGCACAA
AAGcttttatccaaaaaaaattgtatttctacGTCGTGGTCACAAAAGAA
CCACTCGATTTACAAACAATAGTATGCATGACCCAGGCCTTTTTAATCGG
ACCCCTGCAGAGCAGTACTTTGATTGGAGTTGGCCCAAATTTAGTGAATT
TGGGTGAAAATCAATTCGCAATTAATGCATTCTCCAAAACTTTTGGTAAT
TTAACTTGGACatttcaagcaattttcaaaatcaagttttgatggttttt
gtattttcaggattcatcagatttttggattatttGGAATCACGAGATGA
CGTTTACGTGGTGAATATTCAGAAAGTCATTGATTGGATGAGATCACCAA
CGCCTTTGGCTGACATCCAAAATGATTCTGGTCCTTTGAGCTGCTAA Coding sequence (CDS) from alignment at sc0000007_pilon:360298..363244+ >XLOC_042288 ID=XLOC_042288|Name=XLOC_042288|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000007_pilon:360298..363244+ (Clytia hemisphaerica_ch_hm2_pilon)
ACAACTGAAGCGACAACGGAAAGTACAGAAGCGACGACAGAAAGTACAGA
AGCCACAACGGAAAGTACTGAAGCCACAACGGAAAGCACAGAGGCAACGA
CGGAGAGCACAGAGGCGACAACGGAAAGCACAGAAGCGACAACTGAATCA
ACAGAGGCAACTACAGAATCAACAACCGACGGTAATCCACCTCAACCAAA
TTGTGCTgtttgtcaaaacaaaaacaacgaTGAAGATTGTAGGTGTATCG
GGAAAGACACTCCAGAATCCATTCCAAAAGCAAACACACCAAAGCTTGTC
ATGATTTCATTTGACGATGCTGTTACGGATCTAAATTATGCTTTATATgc
agaactttttgatgatCGTAAAAATCCCAATGAATGTCCGATATCAACGA
CTTATTTCGTGTCCGATGCAAATACAATCTATAATCGAGTCAGAAATCTT
GCTGAGAAAGACAACTGAAGCGACAACGGAAAGTACAGAAGCGACGACAG
AAAGTACAGAAGCCACAACGGAAAGTACTGAAGCCACAACGGAAAGCACA
GAGGCAACGACGGAGAGCACAGAGGCGACAACGGAAAGCACAGAAGCGAC
AACTGAATCAACAGAGGCAACTACAGAATCAACAACCGACGGTAATCCAC
CTCAACCAAATTGTGCTgtttgtcaaaacaaaaacaacgaTGAAGATTGT
AGGTGTATCGGGAAAGACACTCCAGAATCCATTCCAAAAGCAAACACACC
AAAGCTTGTCATGATTTCATTTGACGATGCTGTTACGGATCTAAATTATG
CTTTATATgcagaactttttgatgatCGTAAAAATCCCAATGAATGTCCG
ATATCAACGACTTATTTCGTGTCCGATGCAAATACAATCTATAATCGAGT
CAGAAATCTTGCTGAGAAAGGTCATGAAATAGCAGTCCATACAATATCTC
ACCGAACACCAACAACATTCTGGGCGTCCGCCACCCGCCAACAACTGATC
GAAGAAATTGTTGGaatgaaagaaaaacttgaAGACGAAGGAATCGAGAA
TGTGTTAGGATATCGAAATCCATTTTTACAAACGGCTGGAGATCGAACGT
TTCAAGTATTACACGAAAATGGGTTTTTGTATGATTCAACATTACCCGTT
CTTTTTGATAAGCAATATTGGCCATATACATTCGATAATGGTGGACCTTC
ACAATGTGTTATCAACCCTTGTCCAACCAGTCATGAAATAGCAGTCCATA
CAATATCTCACCGAACACCAACAACATTCTGGGCGTCCGCCACCCGCCAA
CAACTGATCGAAGAAATTGTTGGaatgaaagaaaaacttgaAGACGAAGG
AATCGAGAATGTGTTAGGATATCGAAATCCATTTTTACAAACGGCTGGAG
ATCGAACGTTTCAAGTATTACACGAAAATGGGTTTTTGTATGATTCAACA
TTACCCGTTCTTTTTGATAAGCAATATTGGCCATATACATTCGATAATGG
TGGACCTTCACAATGTGTTATCAACCCTTGTCCAACCAgCTCATTCCCAG
GACTTTGGGAGATTCCAATGCTTCAAATGAGAGATACAGCTGCAACATGC
TCAATGTTCGACGCTTGCCACAGATATAGTAGTCAGACTGAAGATGgagt
tttcgaatttttcaaaacaaactttgatCGACATTACGAAACATACACGG
CGCCTTTTCCTTTGTTTACACATGCTTCCTGGATGATGCATCCTGCTTTT
GCGTTCAGGAAAAATGgCTCATTCCCAGGACTTTGGGAGATTCCAATGCT
TCAAATGAGAGATACAGCTGCAACATGCTCAATGTTCGACGCTTGCCACA
GATATAGTAGTCAGACTGAAGATGgagttttcgaatttttcaaaacaaac
tttgatCGACATTACGAAACATACACGGCGCCTTTTCCTTTGTTTACACA
TGCTTCCTGGATGATGCATCCTGCTTTTGCGTTCAGGAAAAATGgattca
tcagatttttggattatttGGAATCACGAGATGACGTTTACGTGGTGAAT
ATTCAGAAAGTCATTGATTGGATGAGATCACCAACGCCTTTGGCTGACAT
CCAAAATGATTCTGGTCCTTTGAGCTGCTAAgattcatcagatttttgga
ttatttGGAATCACGAGATGACGTTTACGTGGTGAATATTCAGAAAGTCA
TTGATTGGATGAGATCACCAACGCCTTTGGCTGACATCCAAAATGATTCT
GGTCCTTTGAGCTGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:360298..363244 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1333-1467:2813 |
| Aaloc | 1105-1329:2315 |
| Aaloc | 796-1101:743 |
| Aaloc | 334-792:1 |
|
