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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1373811..1375673- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042259 ID=XLOC_042259|Name=XLOC_042259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1863bp|location=Sequence derived from alignment at sc0000044_pilon:1373811..1375673- (Clytia hemisphaerica_ch_hm2_pilon)
GACTGTTTACTGGATGACTTGGACGACTTCTACTTCACTGATCCCTCATG
GCTTTATCAGTTGTTATGTTGCGCTGTCAAAATCCTACACAAAACTTCAA
ATCATGGAAGAATAAATCTTCATTCTTTTAGAAATGACCTGAAAAATGAA
AAAATCAACTTTTCTCCGTTGCCGTTCAAAACCTTTCTGCGAATTTTGTA
CAAATTTCAAATCATTATTCCAATTAGTGCGGATGACGTTCTTGTTCCTT
CACAACTTTACAATCAACCTTATCCTATGCCGAAACAACTTGAATTTAAA
GACATGATAATCCGAAGACATGTCTTTTTACTGGTAATTCCACACGGATT
CATGGAACGGTTATTGAGTCGTTTGCTTTTCTTCATGAAGGAAATGATGA
CCAAACAAAACCTTTCTGTTGATGCCACTGGCAGTGAAGCCGTCTTATCG
AATGATGTAACGATTGAAAAAATGCTCCTTGACAGATCTTTGATCTGCTG
GAAGAATGGCATTCAATTAGAGCTTCCCAACTTTCATTTTTCCATCCGAA
AAGAAGCTGTGAGTGGAAATGAAATATTGGAGACCAGAGTGCTTGGTGAT
CTAATGGGCTACCAAGTACTTGGCTACATCATTAAACATATTCAAACGGT
TATCACGGAATGGTTTTCTAACTTTGATCTTTTCTTGTCTTCCGACTACT
CTGGTGAATTTAGTACCGGTATCAGAAATTTTGCAGCATGTCCCGTGTGC
ACCAGGGATGGATGCCAAAAGGTAAACTTCATAAACATTGAGGATGCTTT
CTTGAAATACAACACAAAGATGAATGATAATGATGCCCAACTTTCATGCA
AGGGACAACACTTATTGTCAAGACATGATGTTGAAAAAATGTTTCCCGAA
CTATTTTTCAAAGATTTACCTAAAGATTTGCTGATTGACAAAAGTACCCT
TCATTTCACAGAGAGTGGTGTGTTTGCTCAGGGAGCTTTTGGTGATATGT
ACCATGGATATCATACGACTTCTAAAGAAAAACTAACCCCTGTCTTTATC
AAAACATTCAACGGTTCTGCTAACAAAGAAACTAACATTTGTGAGTTATT
AAATGCATTCTTTGCCGCAAGACACGAGACATTCTTTCTCAATCAACTTC
AGCAAAATCCGTTTATTGTTCGTTTGATTGGTATATCGATACAAACTCCG
TTTGTCTCCTTAGTAACAGAGTTAGCAAGCCATGGGGCCTTAAGAGATAT
CTTGTACAACAAAGCTGGACGGCTACCGATTAAACGGATTTTATTGTTTC
GCATCATCAAACAAGTTGCGAATGCTCTCGTCTACATGCATCAACGGAAT
ATCGTTCATAGAAAGATCAGAAGTGGTAACATTCTTATCAGTGAGTTAGA
TGAACAAAATCTTAATATTATTGTCAAGCTTGGCAATTTTGAAATAACCG
ATAGTTTAACACCAGATGGTATGAAAAAAGTTTACAACTTTATAGTTCCA
GATATCCGACTGTGCAAGGGTGAATACGATGTCAGTGTAGACATATATTC
TTTCTCTATGGTGATTGGAGAAATGATAAATGGTCGACCATCATTTCGTG
GTATTGATCCTTTTGCACTGAAAGATGGTCAGCCACCATCATCTTATGAA
GATACTTTTGCAGCTCTGTATGGGCTGCTCCCTCTAACAGACCTGAGGAC
CAAAATGTGGAAAGAAAAAGGCACGGACCGTCCAACGGCAGAGCAAACCC
TTCGACAAGCTCAAGATTGTTGTTTTCAACTTTTCTACGGGAAGAAAACG
TTTCCAACAAAAGTAATTCCATTAAGCGCAGTCGGCGAAAAAACATTGTG
GATTGAATATCGT Coding sequence (CDS) from alignment at sc0000044_pilon:1373811..1375673- >XLOC_042259 ID=XLOC_042259|Name=XLOC_042259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3648bp|location=Sequence derived from alignment at sc0000044_pilon:1373811..1375673- (Clytia hemisphaerica_ch_hm2_pilon)
GACTGTTTACTGGATGACTTGGACGACTTCTACTTCACTGATCCCTCATG
GCTTTATCAGTTGTTATGTTGCGCTGTCAAAATCCTACACAAAACTTCAA
ATCATGGAAGAATAAATCTTCATTCTTTTAGAAATGACCTGAAAAATGAA
AAAATCAACTTTTCTCCGTTGCCGTTCAAAACCTTTCTGCGAATTTTGTA
CAAATTTCAAATCATTATTCCAATTAGTGCGGATGACGTTCTTGTTCCTT
CACAACTTTACAATCAACCTTATCCTATGCCGAAACAACTTGAATTTAAA
GACATGATAATCCGAAGACATGTCTTTTTACTGGTAATTCCACACGGATT
CATGGAACGGTTATTGAGTCGTTTGCTTTTCTTCATGAAGGAAATGATGA
CCAAACAAAACCTTTCTGTTGATGCCACTGGCAGTGAAGCCGTCTTATCG
AATGATGTAACGATTGAAAAAATGCTCCTTGACAGATCTTTGATCTGCTG
GAAGAATGGCATTCAATTAGAGCTTCCCAACTTTCATTTTTCCATCCGAA
AAGAAGCTGTGAGTGGAAATGAAATATTGGAGACCAGAGTGCTTGGTGAT
CTAATGGGCTACCAAGTACTTGGCTACATCATTAAACATATTCAAACGGT
TATCACGGAATGGTTTTCTAACTTGACTGTTTACTGGATGACTTGGACGA
CTTCTACTTCACTGATCCCTCATGGCTTTATCAGTTGTTATGTTGCGCTG
TCAAAATCCTACACAAAACTTCAAATCATGGAAGAATAAATCTTCATTCT
TTTAGAAATGACCTGAAAAATGAAAAAATCAACTTTTCTCCGTTGCCGTT
CAAAACCTTTCTGCGAATTTTGTACAAATTTCAAATCATTATTCCAATTA
GTGCGGATGACGTTCTTGTTCCTTCACAACTTTACAATCAACCTTATCCT
ATGCCGAAACAACTTGAATTTAAAGACATGATAATCCGAAGACATGTCTT
TTTACTGGTAATTCCACACGGATTCATGGAACGGTTATTGAGTCGTTTGC
TTTTCTTCATGAAGGAAATGATGACCAAACAAAACCTTTCTGTTGATGCC
ACTGGCAGTGAAGCCGTCTTATCGAATGATGTAACGATTGAAAAAATGCT
CCTTGACAGATCTTTGATCTGCTGGAAGAATGGCATTCAATTAGAGCTTC
CCAACTTTCATTTTTCCATCCGAAAAGAAGCTGTGAGTGGAAATGAAATA
TTGGAGACCAGAGTGCTTGGTGATCTAATGGGCTACCAAGTACTTGGCTA
CATCATTAAACATATTCAAACGGTTATCACGGAATGGTTTTCTAACTTTA
CCGGTATCAGAAATTTTGCAGCATGTCCCGTGTGCACCAGGGATGGATGC
CAAAAGGTAAACTTCATAAACATTGAGGATGCTTTCTTGAAATACAACAC
AAAGATGAATGATAATGATGCCCAACTTTCATGCAAGGGACAACACTTAT
TGTCAAGACATGATGTTGAAAAAATGTTTCCCGAACTATTTTTCAAAGAT
TTACCTAAAGATTTGCTGATTGACAAAAGTACCCTTCATTTCACAGAGAG
TGGTGTGTTTGCTCAGGGAGCTTTTGGTGATATGTACCATGGATATCATA
CGACTTCTAAAGAAAAACTAACCCCTGTCTTTATCAAAACATTCAACGGT
TCTGCTAACAAAGAAACTAACATTTGTGAGTTATTAAATGCATTCTTTGC
CGCAAGACACGAGACATTCTTTCTCAATCAACTTCAGCAAAATCCGTTTA
TTGTTCGTTTGATTGGTATATCGATACAAACTCCGTTTGTCTCCTTAGTA
ACAGAGTTAGCAAGCCATGGGGCCTTAAGAGATATCTTGTACAACAAAGC
TGGACGGCTACCGATTAAACGGATTTTATTGTTTCGCATCATCAAACAAG
TTGCGAATGCTCTCGTCTACATGCATCAACGGAATATCGTTCATAGAAAG
ATCAGAAGTGGTAACATTCTTATCAGTGAGTTAGATGAACAAAATCTTAA
TATTATTGTCAAGCTTGGCAATTTTGAAATAACCGATAGTTTAACACCAG
ATGGTATGAAAAAAGTTTACAACTTTATAGTTCCAGATATCCGACTGTGC
AAGGGTGAATACGATGTCAGTGTAGACATATATTCTTTCTCTATGGTGAT
TGGAGAAATGATAAATGGTCGACCATCATTTCGTGGTATTGATCCTTTTG
CACTGAAAGATGGTCAGCCACCATCATCTTATGAAGATACTTTTGCAGCT
CTGTATGGGCTGCTCCCTCTAACAGACCTGAGGACCAAAATGTGGAAAGA
AAAAGGCACGGACCGTCCAACGGCAGAGCAAACCCTTCGACAAGCTCAAG
ATTGTTGTTTTCAACTTTTCTACGGGAAGAAAACGTTTCCAACAAAAGTA
ATTCCATTAAGCGCAGTCGGCGAAAAAACATTGTGGATTGAATATCGTTA
CCGGTATCAGAAATTTTGCAGCATGTCCCGTGTGCACCAGGGATGGATGC
CAAAAGGTAAACTTCATAAACATTGAGGATGCTTTCTTGAAATACAACAC
AAAGATGAATGATAATGATGCCCAACTTTCATGCAAGGGACAACACTTAT
TGTCAAGACATGATGTTGAAAAAATGTTTCCCGAACTATTTTTCAAAGAT
TTACCTAAAGATTTGCTGATTGACAAAAGTACCCTTCATTTCACAGAGAG
TGGTGTGTTTGCTCAGGGAGCTTTTGGTGATATGTACCATGGATATCATA
CGACTTCTAAAGAAAAACTAACCCCTGTCTTTATCAAAACATTCAACGGT
TCTGCTAACAAAGAAACTAACATTTGTGAGTTATTAAATGCATTCTTTGC
CGCAAGACACGAGACATTCTTTCTCAATCAACTTCAGCAAAATCCGTTTA
TTGTTCGTTTGATTGGTATATCGATACAAACTCCGTTTGTCTCCTTAGTA
ACAGAGTTAGCAAGCCATGGGGCCTTAAGAGATATCTTGTACAACAAAGC
TGGACGGCTACCGATTAAACGGATTTTATTGTTTCGCATCATCAAACAAG
TTGCGAATGCTCTCGTCTACATGCATCAACGGAATATCGTTCATAGAAAG
ATCAGAAGTGGTAACATTCTTATCAGTGAGTTAGATGAACAAAATCTTAA
TATTATTGTCAAGCTTGGCAATTTTGAAATAACCGATAGTTTAACACCAG
ATGGTATGAAAAAAGTTTACAACTTTATAGTTCCAGATATCCGACTGTGC
AAGGGTGAATACGATGTCAGTGTAGACATATATTCTTTCTCTATGGTGAT
TGGAGAAATGATAAATGGTCGACCATCATTTCGTGGTATTGATCCTTTTG
CACTGAAAGATGGTCAGCCACCATCATCTTATGAAGATACTTTTGCAGCT
CTGTATGGGCTGCTCCCTCTAACAGACCTGAGGACCAAAATGTGGAAAGA
AAAAGGCACGGACCGTCCAACGGCAGAGCAAACCCTTCGACAAGCTCAAG
ATTGTTGTTTTCAACTTTTCTACGGGAAGAAAACGTTTCCAACAAAAGTA
ATTCCATTAAGCGCAGTCGGCGAAAAAACATTGTGGATTGAATATCGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1373811..1375673 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1606-1827:223 |
| Aaloc | 1447-1605:385 |
| Aaloc | 1030-1437:793 |
| Aaloc | 676-1029:1150 |
| Aaloc | 1-672:1864 |
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