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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:496109..497623- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042225 ID=XLOC_042225|Name=XLOC_042225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1515bp|location=Sequence derived from alignment at sc0000029_pilon:496109..497623- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCCGTTCCCAACTTAAACGCACTGCTAATAAAACAAAGAATCCTGA
GGATGTTGCTCGTTATAATCGTCAGAGAAACTTTGTTGTTAATAAAAATA
GGAAAGCTAAGAAATCTTTCTTCCTCAAAAATGACCCAAAACAATCTCCC
AAGGGATTTTGGGACACCTTTAAACCTTTGTTCTCAAATAAGGTCAATAT
TGCGGGGGAAAGAATTCAGCTCGTTGAAAATGGAAGTATTTTATCTAATG
ACTTGGATATTGCTGAAACTTTCAACGATCATTACAATACTGTTACTGAC
AGATTGGACGTTCCAAGTTGGAACAATGTTACAGGTGAAGGCTCTGATAG
TGTCAATTCCGCCATAAATAAATTTGCTGATCATCCAAGTATAATCAAAA
TTCTTGAAAAAAGGCGTGATGTTGATAAATTTGAGCTCTCACCTGTGACA
AATTCAGATATGCTTAAAGCCTTAAATCATCTGAATGAATCCAAGTCAGT
CAGTGGTAGCATTCCTACTAAAATCATAAAGTTAGCCAAATTTGTTTGTG
CTCCAACTTTGACATCATGCTTCAATAACTCTCTTCAATCTCAAAACTTT
CCTGACAGCTTGAAGCTTGCTGATATAATTCCAGTCCATAAGAAAAACAG
CAAACATGACAAGGATAATTACAGGCCCGTCAGTCTCCTCCCATCTCTGG
CTAAAATCTTTGAAAAACTTATTTCAAATCAACTCAACACCTTCTTTGAA
TCATTTTTCTCTAACGGACTCTGTGGTTTTCGTAAACAGTATAGCACGCA
GAGTGCTTTACTAAATATGTTACGAAAATGGCAGAATTCACTGTCCAAAT
CAAAAAAGATTGGAGCAATTCTGATGGATCTGTCTAAAGCCTTTGACTGT
TTGCCTCATGATCTTCTGATCGCAAAACTTTATGCATATGGATTGGATTG
TAGAAGCCTAGCTTTTATGCAAAGTTATTTAAAAAACAGAAAGCATAGGG
TCAGAGTTGGTTCATCGTTCAGTAATTGGCTACCTTTGCTATTTGGTGTG
CCTCAGGGATCTATTTTAGGACCTATTCTTTTCAATGTTTTTATCAATGA
TTTGTTTTTCTTTGTTAATGAAGACGACCTCTGTAACTTCGCTGATGACG
ATACTCTGCACAAAAGTGCTTCGTCTCTAGATGAGGCCCTCGAAGCTTTA
ATTCTAGACCTAGAAATCATTTTAGCTTGGTTTAAACACAACTCCCTTGT
TGCAAATCCAGAGAAGTTTCAGGTGTTGTTTCCAGGCACAAAGAATGCAA
ATATAGTTTTCAATGTTGGAAATATTACATTAGAGTCTTCCGAGAGCGTG
AAACTGCTTGGAGTAACTATCGACAGTGGCCTCACTTTTTATAATCACGT
ACAGGACATCTGCAAAAAAGCTGCACAGAAGACCAAAACTATTTTTAGAA
TTAGAGCATATTTAAACCAAGAGCAAGCAGATTTATTATTTAATAGTTTT
ATTTTATCTGCTTTT Coding sequence (CDS) from alignment at sc0000029_pilon:496109..497623- >XLOC_042225 ID=XLOC_042225|Name=XLOC_042225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3030bp|location=Sequence derived from alignment at sc0000029_pilon:496109..497623- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCCGTTCCCAACTTAAACGCACTGCTAATAAAACAAAGAATCCTGA
GGATGTTGCTCGTTATAATCGTCAGAGAAACTTTGTTGTTAATAAAAATA
GGAAAGCTAAGAAATCTTTCTTCCTCAAAAATGACCCAAAACAATCTCCC
AAGGGATTTTGGGACACCTTTAAACCTTTGTTCTCAAATAAGGTCAATAT
TGCGGGGGAAAGAATTCAGCTCGTTGAAAATGGAAGTATTTTATCTAATG
ACTTGGATATTGCTGAAACTTTCAACGATCATTACAATACTGTTACTGAC
AGATTGGACGTTCCAAGTTGGAACAATGTTACAGGTGAAGGCTCTGATAG
TGTCAATTCCGCCATAAATAAATTTGCTGATCATCCAAGTATAATCAAAA
TTCTTGAAAAAAGGCGTGATGTTGATAAATTTGAGCTCTCACCTGTGACA
AATTCAGATATGCTTAAAGCCTTAAATCATCTGAATGAATCCAAGTCAGT
CAGTGGTAGCATTCCTACTAAAATCATAAAGTTAGCCAAATTTGTTTGTG
CTCCAACTTTGACATCATGCTTCAATAACTCTCTTCAATCTCAAAACTTT
CCTGACAGCTTGAAGCTTGCTGATATAATTCCAGTCCATAAGAAAAACAG
CAAACATGACAAGGATAATTACAGGCCCGTCAGTCTCCTCCCATCTCTGG
CTAAAATCTTTGAAAAACTTATTTCAAATCAACTCAACACCTTCTTTGAA
TCATTTTTCTCTAACGGACTCTGTGGTTTTCGTAAACAGTATAGCACGCA
GAGTGCTTTACTAAATATGTTACGAAAATGGCAGAATTCACTGTCCAAAT
CAAAAAAGATTGGAGCAATTCTGATGGATCTGTCTAAAGCCTTTGACTGT
TTGCCTCATGATCTTCTGATCGCAAAACTTTATGCATATGGATTGGATTG
TAGAAGCCTAGCTTTTATGCAAAGTTATTTAAAAAACAGAAAGCATAGGG
TCAGAGTTGGTTCATCGTTCAGTAATTGGCTACCTTTGCTATTTGGTGTG
CCTCAGGGATCTATTTTAGGACCTATTCTTTTCAATGTTTTTATCAATGA
TTTGTTTTTCTTTGTTAATGAAGACGACCTCTGTAACTTCGCTGATGACG
ATACTCTGCACAAAAGTGCTTCGTCTCTAGATGAGGCCCTCGAAGCTTTA
ATTCTAGACCTAGAAATCATTTTAGCTTGGTTTAAACACAACTCCCTTGT
TGCAAATCCAGAGAAGTTTCAGGTGTTGTTTCCAGGCACAAAGAATGCAA
ATATAGTTTTCAATGTTGGAAATATTACATTAGAGTCTTCCGAGAGCGTG
AAACTGCTTGGAGTAACTATCGACAGTGGCCTCACTTTTTATAATCACGT
ACAGGACATCTGCAAAAAAGCTGCACAGAAGACCAAAACTATTTTTAGAA
TTAGAGCATATTTAAACCAAGAGCAAGCAGATTTATTATTTAATAGTTTT
ATTTTATCTGCTTTTATGCTCCGTTCCCAACTTAAACGCACTGCTAATAA
AACAAAGAATCCTGAGGATGTTGCTCGTTATAATCGTCAGAGAAACTTTG
TTGTTAATAAAAATAGGAAAGCTAAGAAATCTTTCTTCCTCAAAAATGAC
CCAAAACAATCTCCCAAGGGATTTTGGGACACCTTTAAACCTTTGTTCTC
AAATAAGGTCAATATTGCGGGGGAAAGAATTCAGCTCGTTGAAAATGGAA
GTATTTTATCTAATGACTTGGATATTGCTGAAACTTTCAACGATCATTAC
AATACTGTTACTGACAGATTGGACGTTCCAAGTTGGAACAATGTTACAGG
TGAAGGCTCTGATAGTGTCAATTCCGCCATAAATAAATTTGCTGATCATC
CAAGTATAATCAAAATTCTTGAAAAAAGGCGTGATGTTGATAAATTTGAG
CTCTCACCTGTGACAAATTCAGATATGCTTAAAGCCTTAAATCATCTGAA
TGAATCCAAGTCAGTCAGTGGTAGCATTCCTACTAAAATCATAAAGTTAG
CCAAATTTGTTTGTGCTCCAACTTTGACATCATGCTTCAATAACTCTCTT
CAATCTCAAAACTTTCCTGACAGCTTGAAGCTTGCTGATATAATTCCAGT
CCATAAGAAAAACAGCAAACATGACAAGGATAATTACAGGCCCGTCAGTC
TCCTCCCATCTCTGGCTAAAATCTTTGAAAAACTTATTTCAAATCAACTC
AACACCTTCTTTGAATCATTTTTCTCTAACGGACTCTGTGGTTTTCGTAA
ACAGTATAGCACGCAGAGTGCTTTACTAAATATGTTACGAAAATGGCAGA
ATTCACTGTCCAAATCAAAAAAGATTGGAGCAATTCTGATGGATCTGTCT
AAAGCCTTTGACTGTTTGCCTCATGATCTTCTGATCGCAAAACTTTATGC
ATATGGATTGGATTGTAGAAGCCTAGCTTTTATGCAAAGTTATTTAAAAA
ACAGAAAGCATAGGGTCAGAGTTGGTTCATCGTTCAGTAATTGGCTACCT
TTGCTATTTGGTGTGCCTCAGGGATCTATTTTAGGACCTATTCTTTTCAA
TGTTTTTATCAATGATTTGTTTTTCTTTGTTAATGAAGACGACCTCTGTA
ACTTCGCTGATGACGATACTCTGCACAAAAGTGCTTCGTCTCTAGATGAG
GCCCTCGAAGCTTTAATTCTAGACCTAGAAATCATTTTAGCTTGGTTTAA
ACACAACTCCCTTGTTGCAAATCCAGAGAAGTTTCAGGTGTTGTTTCCAG
GCACAAAGAATGCAAATATAGTTTTCAATGTTGGAAATATTACATTAGAG
TCTTCCGAGAGCGTGAAACTGCTTGGAGTAACTATCGACAGTGGCCTCAC
TTTTTATAATCACGTACAGGACATCTGCAAAAAAGCTGCACAGAAGACCA
AAACTATTTTTAGAATTAGAGCATATTTAAACCAAGAGCAAGCAGATTTA
TTATTTAATAGTTTTATTTTATCTGCTTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:496109..497623 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1129-1518:391 |
| Aaloc | 292-1128:1231 |
| Aaloc | 1-285:1516 |
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