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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:119432..121424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042151 ID=XLOC_042151|Name=XLOC_042151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1993bp|location=Sequence derived from alignment at sc0000133_pilon:119432..121424+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGTTCACTATTCGTTACCTGAGAGAAGGAAGCACCATGAAGAGGT
ACATAACAAACTTTTGCTTCTCTGAAAAATAGGCATTAGTgataaaagaa
agatttgaagaGTCGAAATTCGATTccattcaatttcaatttttttcttt
tagatggTACGACGCTTGATTTCTAACCCCGAGGCACGAAATAAGATGAA
CACCTATATCTATCGACAGGAATATGAAGGTTTGTTGAATCTTATTATTG
CAGCAAAACAGCGAAATCTTTGCAAAATAAAGCTGCTAATTCCAAGATTc
tgtggatttttttttcaaaaaataattacaataaAGTTTTTTCAACTTTC
GTGTAGAAAAAGATCGAATTTGCAAGATTTTGGACCAATGGGACAACGCG
GAATATTCAACAGAACCAAGCAGTCAAGTCATCAATAAACAAGCTGTACC
GCATATCAAGGAATGGTGCTCCAACAGTTCTGGTAAAGGTTAGTTTCACC
AAGTTTTCATTCTCCAAGCTGGCTTCTCTAAAGCCCATGTTCTAAACATG
CTCAAAAATCATGATATTTTACGGAAGGAAACCTTCGAAGAATGAAGCTG
AAGTCCAACGTTCAGATCATTATTGCATAACAGTGACATAGATACGACAg
ctttttagaaatattaggAAATTGCATATCTTCATTACATTTCATTACTT
TACTCTTTGTTGAAGGGTAATTACCATCTGACCGGTAATTAGGGTATTAA
CCAGAAGACATagtaattgttttgttttaaaactcaaaattatcGAGGCa
aaacaattattgaaagtAACAATAAAAGCTTTGTTTATATCTTACTACTT
TATCCGGAAGCTGTTAACCGGGTTTACTCAACTATACGGAATTACTGGCT
GaatcttttgaattaaaatttagaTTTGGTGACAGTGAAGAAATTTCTTC
AACATCTAACGAacgaacaaaacaaagaaaatgaaaaggaatTGGGAGGT
GACAGTACACGTCGAAGTCTTGGTAGTCGACAAAACTCCCTCCTATTATC
TGATCGCAGTGGAAGGCCAAAACTAACAAAACGTGACACCATTACAAATG
GGTCGTTTTATCCTGATCCAGGAACTGGTCGTGGTAACTCCACTGGAATG
TTCAATATCGTCAAGTCAGTACCTCAACCAAACCTTGTAAATAAGCCAGC
AGGAAAGCGGCCCACCACTGGTAGCAGCCAAGCATCAAGCTCAAGAAAAC
CATCTGGTCTCAAACGTGGAGCCACTCAACCAGCTATGAGTCGAAGGAAT
GATTATTTTGAGATCCCAACTAACCGCAGTGGAGTGTTTGGTGAAGTGAT
CCGTGCACCTCCACAACAACCAAACAAAGAGAACCTCCCTCCTGCAAGAC
CAAATGACAACAAGCGTCCACCGAGCACGGCATCAGGGAAACGTGGTCAA
TGGAGCAGACCTGGCACCAGTCAACGACCAGCTACAATGCAAAGTAGAGC
GGGAACAGCACAACAGCGACCAGGGACAATGCAGAACAGACCAGGTACAA
TGAAAAGTCGACCAGGCACAATGCAAAGCAGACCCGGTACCATGCAAAGT
CAACGTTCTTATTCAAGCAGAATTCCAGTCAGAGATGGCTTAGGAAAGCG
TTCCAAAACGCAAGGTCATTTTTATCCAAGTCATCAGGATGATACAGAGA
AATTGAAGTTCAGCGCTAACCTTCAAAATGTTCGTGACGAGGAGAGTAAC
CAACATCAACAAGAACGAAACTTGACACCAGTCCTCCACCAAGATGATGG
AATGACACCAAGATatccacatcatcaacatcaacatcaacaacatcaat
cagaatacagaatcgacacatcaCCACCAGCAACGGCAGCAGCAGATGAA
TTTGATGATGGCGAAATGTCTCATCGACCCATTCAATATCCGAACAAGTT
CCCTGGTCGAAGATACCAAGCTTCACAAATTACCTTCCATTGA Coding sequence (CDS) from alignment at sc0000133_pilon:119432..121424+ >XLOC_042151 ID=XLOC_042151|Name=XLOC_042151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2652bp|location=Sequence derived from alignment at sc0000133_pilon:119432..121424+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGTTCACTATTCGTTACCTGAGAGAAGGAAGCACCATGAAGAGAT
GGCCGTTCACTATTCGTTACCTGAGAGAAGGAAGCACCATGAAGAGatgg
TACGACGCTTGATTTCTAACCCCGAGGCACGAAATAAGATGAACACCTAT
ATCTATCGACAGGAATATGAAGatggTACGACGCTTGATTTCTAACCCCG
AGGCACGAAATAAGATGAACACCTATATCTATCGACAGGAATATGAAGAA
AAAGATCGAATTTGCAAGATTTTGGACCAATGGGACAACGCGGAATATTC
AACAGAACCAAGCAGTCAAGTCATCAATAAACAAGCTGTACCGCATATCA
AGGAATGGTGCTCCAACAGTTCTGGTAAAGAAAAAGATCGAATTTGCAAG
ATTTTGGACCAATGGGACAACGCGGAATATTCAACAGAACCAAGCAGTCA
AGTCATCAATAAACAAGCTGTACCGCATATCAAGGAATGGTGCTCCAACA
GTTCTGGTAAAGaTTTGGTGACAGTGAAGAAATTTCTTCAACATCTAACG
AacgaacaaaacaaagaaaatgaaaaggaatTGGGAGGTGACAGTACACG
TCGAAGTCTTGGTAGTCGACAAAACTCCCTCCTATTATCTGATCGCAGTG
GAAGGCCAAAACTAACAAAACGTGACACCATTACAAATGGGTCGTTTTAT
CCTGATCCAGGAACTGGTCGTGGTAACTCCACTGGAATGTTCAATATCGT
CAAGTCAGTACCTCAACCAAACCTTGTAAATAAGCCAGCAGGAAAGCGGC
CCACCACTGGTAGCAGCCAAGCATCAAGCTCAAGAAAACCATCTGGTCTC
AAACGTGGAGCCACTCAACCAGCTATGAGTCGAAGGAATGATTATTTTGA
GATCCCAACTAACCGCAGTGGAGTGTTTGGTGAAGTGATCCGTGCACCTC
CACAACAACCAAACAAAGAGAACCTCCCTCCTGCAAGACCAAATGACAAC
AAGCGTCCACCGAGCACGGCATCAGGGAAACGTGGTCAATGGAGCAGACC
TGGCACCAGTCAACGACCAGCTACAATGCAAAGTAGAGCGGGAACAGCAC
AACAGCGACCAGGGACAATGCAGAACAGACCAGGTACAATGAAAAGTCGA
CCAGGCACAATGCAAAGCAGACCCGGTACCATGCAAAGTCAACGTTCTTA
TTCAAGCAGAATTCCAGTCAGAGATGGCTTAGGAAAGCGTTCCAAAACGC
AAGGTCATTTTTATCCAAGTCATCAGGATGATACAGAGAAATTGAAGTTC
AGCGCTAACCTTCAAAATGTTCGTGACGAGGAGAGTAACCAACATCAACA
AGAACGAAACTTGACACCAGTCCTCCACCAAGATGATGGAATGACACCAA
GATatccacatcatcaacatcaacatcaacaacatcaatcagaatacaga
atcgacacatcaCCACCAGCAACGGCAGCAGCAGATGAATTTGATGATGG
CGAAATGTCTCATCGACCCATTCAATATCCGAACAAGTTCCCTGGTCGAA
GATACCAAGCTTCACAAATTACCTTCCATTGAaTTTGGTGACAGTGAAGA
AATTTCTTCAACATCTAACGAacgaacaaaacaaagaaaatgaaaaggaa
tTGGGAGGTGACAGTACACGTCGAAGTCTTGGTAGTCGACAAAACTCCCT
CCTATTATCTGATCGCAGTGGAAGGCCAAAACTAACAAAACGTGACACCA
TTACAAATGGGTCGTTTTATCCTGATCCAGGAACTGGTCGTGGTAACTCC
ACTGGAATGTTCAATATCGTCAAGTCAGTACCTCAACCAAACCTTGTAAA
TAAGCCAGCAGGAAAGCGGCCCACCACTGGTAGCAGCCAAGCATCAAGCT
CAAGAAAACCATCTGGTCTCAAACGTGGAGCCACTCAACCAGCTATGAGT
CGAAGGAATGATTATTTTGAGATCCCAACTAACCGCAGTGGAGTGTTTGG
TGAAGTGATCCGTGCACCTCCACAACAACCAAACAAAGAGAACCTCCCTC
CTGCAAGACCAAATGACAACAAGCGTCCACCGAGCACGGCATCAGGGAAA
CGTGGTCAATGGAGCAGACCTGGCACCAGTCAACGACCAGCTACAATGCA
AAGTAGAGCGGGAACAGCACAACAGCGACCAGGGACAATGCAGAACAGAC
CAGGTACAATGAAAAGTCGACCAGGCACAATGCAAAGCAGACCCGGTACC
ATGCAAAGTCAACGTTCTTATTCAAGCAGAATTCCAGTCAGAGATGGCTT
AGGAAAGCGTTCCAAAACGCAAGGTCATTTTTATCCAAGTCATCAGGATG
ATACAGAGAAATTGAAGTTCAGCGCTAACCTTCAAAATGTTCGTGACGAG
GAGAGTAACCAACATCAACAAGAACGAAACTTGACACCAGTCCTCCACCA
AGATGATGGAATGACACCAAGATatccacatcatcaacatcaacatcaac
aacatcaatcagaatacagaatcgacacatcaCCACCAGCAACGGCAGCA
GCAGATGAATTTGATGATGGCGAAATGTCTCATCGACCCATTCAATATCC
GAACAAGTTCCCTGGTCGAAGATACCAAGCTTCACAAATTACCTTCCATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:119432..121424 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 259-1326:926 |
| Aaloc | 127-255:359 |
| Aaloc | 49-123:154 |
| Aaloc | 1-48:1 |
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