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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:355103..361029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042126 ID=XLOC_042126|Name=XLOC_042126|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5927bp|location=Sequence derived from alignment at sc0000133_pilon:355103..361029- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCTTATCAAACTTTTTGTCACGACGTTATTTTTATCAGGTAAGCT
ATACTTCTAATGACCTTTGATAAATTCTTTGAAAGGCTGATAATATTTTT
GGGCTCTCACTTTTGTTTTCATAAAGTTTTCTATTCATAAAATGGCCTTA
TACATGTTATATGCAATTTTTTTGACGTCACCTCTGACAAACCTATTGTC
TAACCACTTTCCTAGTTAATAATGACTAGAAAATCTTTTCTCAAACTTCA
AGCTTGAAGCTTTCTATAATTTCGTTTTCTTTGCTTTCAGTCATTCCATA
CATTGCATGTAGTTATGTGGATTTGAATTTGTTTTGTGAAGAATACAGTG
ACGGGCTCATTGATGTTGCTTGTGTTGAAAAAGTTGGTAACACTCAACAT
ATGAAAAAATTGATCTACAATGGACGAAATGATATCGACTGGGAGCGCTA
TGGTAAATCTATAAAGAGGTTCGTACTTTGTAATACTGTATAGAAGAGGC
CAATTTTCACGCATTCACGCAACCAAAAATGCCTATTCACGCATTCCGGG
ATAGGGGGTGCCTTAGATAAATTTAGATTTGAGATTTTTTTAAAAGTAAT
ACAACACTCTGCATTACAAGTTTTAAGTGGTTGGACTTAACCATAAATCT
GATACCCATTATCGTCTAGCCCTAGAACAATCGGTCTACTGTTGTCAAAT
CTAATCTTTGGACGCTGTAAAATACGTGTCCAGAAGACCTCAGTTTTCCA
ATAATTTTGTTTTTTCGTTTTTATAGAATTCTTTGTAAATGTAATGAATT
GGTGAAGAAATCAGGAAAGAAATATTTAACATTGGGAATACAATTTTATG
GAGAATGTTGGGTTAGTGAACATCGAGTTGAAGATATTTTAAAAGAAGTT
CCGAAATCGAAATTGTGCGTGAACCATAAATACAAAGCATGCAAACCTAG
AAGTTTCCACCAGAAAGCAGCAGGGCGTAACGGATACGAGATCAAAGTTA
ATACACACGCATGCGCAGGGAATGACAAATCGACTGCCTTGTACACTTAT
TGTGAGTATTTATTTTAATCTCTTTGAAAATATATTTCTTTTTTCAGCAA
TGTTTCCACCATCTTTCTAGGACCTAAAAATTCTACATCCCTTGTTGGCA
ATGATTTTATGTTCGTTTATCTTTTGGTCTATGAATTATTATGATGTGTG
GGGGTCCCCCAAATCCCTTTCTTAGTGGATAGAAAAGCCCTGATAGATAT
CAAATATATCTATGATATCAGACCAGACTGGAACACTTTATTTGGATCAT
CTGATAGATTATGATTAACATTTTTCCAATTATCTTAACTTTACCCTCAG
ATCATTTGCATGAGATTCAAATTGAGGTCTTGGAAGAAGCAAAAGAGACA
GAGTGGACCTCATGGACAACATGCAGTAAAAGTTGTGGTAAAGGATATCA
AGAAAGATCACGAACAGCTTGTGAAATGGTCTCTGGTGTTCACAGATGCG
ATGTCATGAAGGTGGACAGACGTGAATGTAATTACCAAAGTTGTGGTAAG
AAATCCTCGAAGAAATCTATCTAGAAAAACGTTAAAAACAACATTTTGTA
GCCTTTCAAAATTCTGTTGGATAAAAATATGTGTTTAGCAATTGCTGTCA
CATGCAATTTACACTTTTGGTCAATGCACCTGACTCTTCATATGCTACTC
CGAGCTACTCCTCATTTTTATAAGCATCTCCAATTTTCGGGTCAGTCCTG
GGATCGCTTAGCATTCTAGCTCATTTTTTGAAATATTTGCTTCGACCACG
CTTGATATCATACCATATTTATACTTATTTGGTCAAGGGCTATCGTTAGA
CATGGTTAGATTATCTTATAGAAAAAGCTTTTACTTTACAAGATAGGGAA
ACAAATTTAGCTAATTTGCGGCTTCAAGCCTTAGCAATCTGGTTGCTTGT
CAAATGGAAAATGTTTCACAGAAAGGATATAGGTTTTAAACATTGATTTC
ACAATTTACAATTTTAATCTAGCCTTGACGGAGCCAGCGAAAGCAGCATT
TCGACCAATCAATGGAGGTTTTAGTGAATGGACAAGTTGGACACCGTGCG
TTTGTGGAAATACAGCTCCTTCAATTAGAACAAGAAAATGTGACAATCCA
AAACCTCAAAATTCTGGCAAAAATTGTGTCGGTGAACCTTTTCAAATGAA
ATTGTGCAAATATGAAGAATGTTAAATTTAAGAATCTGGTTATATCTTTG
TATTGATTATGTTATGGTATTGGCAAATTTGTTTTTGTCTTAACTCTTTT
CGGTCGAATCATCTTTTAAATATTTAATTGTTAACTTATCGTAGAGACTA
ATCTAATTTATGAGTCAGCAAGTGACGTTTTATGTATGCCATCCAAAACG
CAATAGCTTGATTGCTAAATGTTTGTAATTTTCATGGGTTTCGTTTTCAT
GAAATGTAATCCTTTTTTGATAAATAAATAAATCAAACAAATTCATTTTC
TGTTTTTAATTTCAAAGGGTGAAGATTGAATTTGAAAAGTCAACTTTACT
TCAAAGCGACAAAAGGGGGCCGAGTAAACACGTGAAAATGAAGAAAAAAT
GAAAAACAATTTTCCCTTTCGAGAACAAAACTTTGTATCAAGTATTAGTT
TAGCAGCTTAACCCTTTAAGTGCCGATGTCGTATATATACGACATGGGCT
ATATAGGAGGGCGAAGCCCTCCTGTAATGCCCAGTTTGAGTTAGAAATCG
TTATTTTTGGTCGAACTCGTAGGAATTAGATTGTCCTTTATGGTCAAGCA
AAAAAAAATTCAAAAGTGAGTCTTTCCAGCGAAATTTTAAGCAAAAAAGT
CAAAAAATTGCAAAAAATTGACAAAAATTCACTTTTTTGAGATTCTGACC
GTTTTTTGACTATTTTTGGTCAACGAGTGATCCAAGAACCTCCAAATTTG
GCCCTGTTTTACTTTATTCTGTCTTCTAGTGAATTGATTTGAAATTTTAC
CACTGGGCACCTTTTCATCAGTTCAGTCAGGTCCGCGCAGCGGGCCTGAC
TGCTTTAATTCCCTAACCTACCCCCCCCCCTTGGCCGCCGCCCACCACGC
CCTTCCTAAATCGGGCGGCGCCGAAGGCGCCCAAAAGAAAGAAGAGACTC
TAAGCTATCCAACGAGCTATATACGAGCTTCTAATTCCTTCTAGATCAGG
AGATATAAGCCCTTAAAGTTTGAACTAGCGATTTTTTAAAAAAAACTTAG
AAAAAAGGACCCTGGCACTCAAAGGGTTAAGCAACATTCATGCGTAAATT
GAAAACGCTATCCGTTAAAACCAAATACGATCTTCAAATATTTGATTAAC
TGTAATTTGCAGGTGTAGACCAAAACCCTTTGTGCTTTTATTCGCTCTTT
GCAATTGTTATTAGCTTAGTATAAAATTCAAGAACCGTCTACGGTCAAGT
TAATATGCAAAAACTTATTTTTAGAAACGGTTCAGAGTGTTGGTTTTTAG
ACTCTTTAAAATGAATACAATCAAAATTTCAACTTTTACACTTTTATTAT
CAGGTAAGTCATTTTTTGGAAGTTTAGTTGCGGTCATTTTTTGCCGTTAT
TCTTAGCCACGTGATGTCTGGTATTACACTTTTTTTTATAAGAGCATCTA
AATTTTAAAGCCTTCGGATTTTCTTAAACTTTTTAAGTTTCAAATGTTCT
TCAAATTTTTCCTCTTTTTTCTATATTTTTGTCTGTCTTCGAGTCCGCAA
AGCTTTTTAAAAATATTCTCAACTTGTTCTTAATATTTTGGCCATCGAAG
CCTTATGTTCTTATAGTTTGTTCCTATGAAACAACGTGTACCATTTAATC
TCTGCATTAGTTTTGAAGACTCCCCAACTGGTCATCTTAATCATACTTCT
GGCAAAATGAAGATACTAAAGCAATCATAGGCTTTCACTGTTCCTCATCC
GGGGCTAAAATGTTAACAATTTTGACGTGTATAGTATATATCTTTTTCGC
TCTTTCAGTCATTCCATACATTGCATGTAGTTATGTGGATTTGAATTTGT
TTTGTGGAGATTACAATAATGGGCTCATTGATGTTGCTTGTCTTGAAAGG
ATTGGTGACACTCAACACATGAAAACGTTGATCTACAATGGACGAAATGA
TATCGATTGGAATAATTACGGAGCGTCTGTTGAAAAGTATGATCACTTTG
TACTTATTTATACTCTATGTTTTATTCAAATTATCAATTTTAACACTTTG
AAGATTATTTCAAGATAAGATCCAAGGTTCTGCACCCCGTCACTGATCCA
CTGAGTTGCACTAGTGTATGTGAATTATCTTCAAAAAATGACATCATCCC
TTGTTTGTCATTCGGTTAAGGATTTCTGTAAAAGTAATTCTACAGTTTGC
ACCGAATGGCCTTTTAAATAATTTTGTTTTTCTGCCATTATAGAATCTTA
TGCAAATGTAAAAAGCTTGCGCAAGATTCTGAAAAACAATATTTGAGTTT
TGGAATCCAATTTTACGGTGAATGTTGGGCCAGTGAATATTCAGTTGAAG
ACCTCTTGAAGAAAGTTCCAACGTCCAACAAATGCGTCAACGGAACGTAC
AAAGAATGTCAACCACAGAATTTTCATCGTAAAGTAGAGGGACTAAATGG
AGGAGAAATTACTATCCAATCACAAGCTTGTGCTGGTACTGATGTCTCAA
CTTCGCTATACACTTATTGTGAGTATTGTATTGTTGTTGTTAGCGCTCAG
ACGTATGACATTTATTTCAAAACGCAAGATAAACTAGTTGTCATCAGTGC
AAATTCTTTATAACCTTTGAGGTTATTTTATATTAACTTCTTTTTTGTCA
AAACGCCTTGAAACAATCGAATTTGGCCAAAAATCTAAAAATTTTAACAA
CCCATGACATTGGATTTTATTTCATAGCTTCCACAATCCTGGCCATAATA
TTTGAGACGAAAGGAAATTCTCAATATATTTTGGCCCGGATTGCAGAGGG
AGTAACAAAAAACCACTATCAAATATCTATCATCTCTTTTGAGATGATAT
AGCCTTCAAAGTCTTCAAATTCCCAAAAATCGACCAACCATTAGTTTGAA
AGACGTAGTTCTGTCATTCATTCATTCATTCATTCATTCATTCATTCATT
CATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCA
TTCATTCATTCATTCATTCATTCATTCATTCATATTCATTTACTTTAAGA
TTATCTACGAGAAGTGGAAATCGAGACTCCAGATATTGGTAAAGAGACAG
AGTGGACCTCATGGACAACATGTACTAAAAGTTGTGGTAAAGGATATCAA
GAAAGAACACGAACAGCTTGTGAAATGGTCTCTGGTGTTCATAGATGCGA
TGTCCTGAAAGAAGAGATGAGAGAATGCAACAAGCATGCATGTGGTTAGC
ATTTCTTCACTACTCTTACCCTCATTTTTTTAATAGAGACCTCGAGCTCG
AATTTGATACTGTCAAATTGGTCATCGCCAAAGATGAGTTATTCAGTTAT
TCAGAATCTGTTCTATCCAAATCTTTTTGACACCCTTTGTTAATTTTATG
TGGTGAATTCGAATCACAAGTCAGTGAAAACAACACTTTATACGTACAGA
TATGTTTAATACGAAATGGGCTAGGAAAAGTAATAAATAAACAACCTAGA
ATGTTTTTTGAATTCAAACTAATATTTCTTATTTAGAAGAAGAGAAAGAA
GAATTTCGACCAATCAACGGAAAATTTAGGGAATGGTCAAACTGGTCTCC
ATGCGTTTGTGGAAATACAGCTCCTTCAATTAGAACAAGAAAATGTGACA
ATCCAAAACCTCAAAATTCTGGCAGAAATTGTGTCGGTGAACCTTTCCAA
ATGAGACCATGCTTCAAGATGAACTGC Coding sequence (CDS) from alignment at sc0000133_pilon:355103..361029- >XLOC_042126 ID=XLOC_042126|Name=XLOC_042126|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1764bp|location=Sequence derived from alignment at sc0000133_pilon:355103..361029- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCTTATCAAACTTTTTGTCACGACGTTATTTTTATCAGATGGAGC
TTATCAAACTTTTTGTCACGACGTTATTTTTATCAGTCATTCCATACATT
GCATGTAGTTATGTGGATTTGAATTTGTTTTGTGGAGATTACAATAATGG
GCTCATTGATGTTGCTTGTCTTGAAAGGATTGGTGACACTCAACACATGA
AAACGTTGATCTACAATGGACGAAATGATATCGATTGGAATAATTACGGA
GCGTCTGTTGAAAATCATTCCATACATTGCATGTAGTTATGTGGATTTGA
ATTTGTTTTGTGGAGATTACAATAATGGGCTCATTGATGTTGCTTGTCTT
GAAAGGATTGGTGACACTCAACACATGAAAACGTTGATCTACAATGGACG
AAATGATATCGATTGGAATAATTACGGAGCGTCTGTTGAAAAAATCTTAT
GCAAATGTAAAAAGCTTGCGCAAGATTCTGAAAAACAATATTTGAGTTTT
GGAATCCAATTTTACGGTGAATGTTGGGCCAGTGAATATTCAGTTGAAGA
CCTCTTGAAGAAAGTTCCAACGTCCAACAAATGCGTCAACGGAACGTACA
AAGAATGTCAACCACAGAATTTTCATCGTAAAGTAGAGGGACTAAATGGA
GGAGAAATTACTATCCAATCACAAGCTTGTGCTGGTACTGATGTCTCAAC
TTCGCTATACACTTATTAATCTTATGCAAATGTAAAAAGCTTGCGCAAGA
TTCTGAAAAACAATATTTGAGTTTTGGAATCCAATTTTACGGTGAATGTT
GGGCCAGTGAATATTCAGTTGAAGACCTCTTGAAGAAAGTTCCAACGTCC
AACAAATGCGTCAACGGAACGTACAAAGAATGTCAACCACAGAATTTTCA
TCGTAAAGTAGAGGGACTAAATGGAGGAGAAATTACTATCCAATCACAAG
CTTGTGCTGGTACTGATGTCTCAACTTCGCTATACACTTATTATTATCTA
CGAGAAGTGGAAATCGAGACTCCAGATATTGGTAAAGAGACAGAGTGGAC
CTCATGGACAACATGTACTAAAAGTTGTGGTAAAGGATATCAAGAAAGAA
CACGAACAGCTTGTGAAATGGTCTCTGGTGTTCATAGATGCGATGTCCTG
AAAGAAGAGATGAGAGAATGCAACAAGCATGCATGTGATTATCTACGAGA
AGTGGAAATCGAGACTCCAGATATTGGTAAAGAGACAGAGTGGACCTCAT
GGACAACATGTACTAAAAGTTGTGGTAAAGGATATCAAGAAAGAACACGA
ACAGCTTGTGAAATGGTCTCTGGTGTTCATAGATGCGATGTCCTGAAAGA
AGAGATGAGAGAATGCAACAAGCATGCATGTGAAGAAGAGAAAGAAGAAT
TTCGACCAATCAACGGAAAATTTAGGGAATGGTCAAACTGGTCTCCATGC
GTTTGTGGAAATACAGCTCCTTCAATTAGAACAAGAAAATGTGACAATCC
AAAACCTCAAAATTCTGGCAGAAATTGTGTCGGTGAACCTTTCCAAATGA
GACCATGCTTCAAGATGAACTGCAAGAAGAGAAAGAAGAATTTCGACCAA
TCAACGGAAAATTTAGGGAATGGTCAAACTGGTCTCCATGCGTTTGTGGA
AATACAGCTCCTTCAATTAGAACAAGAAAATGTGACAATCCAAAACCTCA
AAATTCTGGCAGAAATTGTGTCGGTGAACCTTTCCAAATGAGACCATGCT
TCAAGATGAACTGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:355103..361029 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 694-882:190 |
| Aaloc | 499-690:677 |
| Aaloc | 223-495:1484 |
| Aaloc | 46-219:1918 |
| Aaloc | 1-42:5928 |
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