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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:432405..439569+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041997 ID=XLOC_041997|Name=XLOC_041997|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7165bp|location=Sequence derived from alignment at sc0000019_pilon:432405..439569+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCCCAAAAATTTCAGTAGACGATCGTATTGCATCCTTGTATCCCTT
TGTTAATGAAGCAGAAACACCTTTACCACGATCATGGAGCAGTCAGGATA
AATGTAGCCATATTGGATTATCGCAAAATAATCTGAGGGCCCACTATAAA
GGTAAGCTATAATTTCAACATCCTGAAATCAATGATAAACCaatatatat
cttttttatattCTAAAATTGATAGCTTTCAGGAAACTTTGTCAACTCAT
CAGCGTCATCAAAGACACTATGAAATTCACCAAATGGAAATGGTTTTCAG
GAAATCTTGTGgattgaaaaagtttctttcaaattgACTGCAACAATATT
CCTTTTATACCATTTTAGGTGACCTTGTAAAGGCTTATATTGTATCCGTA
AACTAACTCATAACTCAATTATATTTACATCATAATAacaactagccgta
tgcgcagcgttGCACGCTGTTAAAGAGCATTTgaataagaatttttcaaa
agcaaatATTATatttgggaagaaggttgattttaacccatccagCTCCA
ATGTTCCTgtatagaaaatagtatcttggcgtctcaaagttagtctagtg
gtaggaaaactGCATGAGGtgtaaaaagatgatggttcaacgccatgaag
aggaagctttgtagagctttgttagaatttcaaaaaCTTTTTACTGAATG
TTCCTACTGTTGGTTTTAGGGGTTGGTAAAACACACAAAGATGCAGCCTC
TGCAAGAGCTTCATACCCTATTCCTGCTGGTTGTGGCCTCTATTATTTTG
AAGTCAAAGTTATCAGCAAAGGAAGAGACGGGtatatatgattttttatt
ataatttttagtttttatcaaagccaattttttatatatgttagtttgca
tttttattCATTAGGCTACAAGCATCTCCTCTGATATGTTTATAGGGGAT
GCTAATCGTGTATAAGATTCCTGTCGGAGTGTTGCCCCAAAGTTGGGGTA
CAACCTGTTTAAAACTTCTTACAAAGGCTTGGAAATCCAACATTTTTATT
AATCTCTAgccattcaaaatttcaatacgaatttaatgaaattttaagat
cTCTCATGTAAAACTTACTAAAAGCTAATCAagtttccaaatttcaaaaa
tgggaACTatacagatgagatggagtttttataagatacttcaataattg
gtcatttgaagtaatcaAAATGCCGCGTTCTTATCAaacaagagcttgta
aaaactccacctCATCCCGAATTATATCAATCATATCAGAGGGAATGTGT
GCAACATATTTATTCATTATCCAtcgggggaaatttgtaaaatcgctcga
tttttttagtcaaagcacttgttatacatttttggaaagctaaggggtag
gggaatcaaaataacttgggtgccaattttgtttcgaacactttggtgtg
attttcggacaaatacgacggtctcaggcaaaaataatagggtgaaaatt
taatgaaaattttagcttcagaaaacggagacctgttgtatatttttgga
aagctctcagaaaattaagattagtgatgtattgcgagtataggtaaTTA
CTTtatctaactcgagatattaatccttaaaaacagtgtttttcagtgtt
tttcagccagaaacagctgttttgtccagtttttgcgctttcggaagctc
aatatctcgagttaggtactgaaatcacctatactcgcaatatatcacta
atcttaattttttgagagctttccaaaaatatacaataggtctctgtttt
ctcaagctgaaattttcattaatttttcaccctatgatttttgcccgaga
ctgtcgtatttgtccgaaaatcacaccaaagtgtccgaaacaaaattggc
acccaagttattttgattcccctaccccttagctttccaaaaatgtataa
caagtgctttgactaaaaaaatcgagcgacctcaaaaaaacgaacaaatt
tccccctactaatcaGTGTCAATagatattattatttatttattgttgAC
ATTGCTCTTTTTACTatgaaattattcaaaacaaattttaattaGGAGTC
ACAACTAGAGCCAGACTTTGTCAGATGGAAGACTTTTTTGACCTCTAAGa
tcgattttttaaaaacattcaactatcattagaaaattttttcgtttctt
taGGTATATTGGTGTTGGTCTGTGTGCACATGGAGTCAATACGAGCAAAC
TACCAGGTATCATTATAGATGGGTGTTCTGTACTTAAATATTGTTTGTCA
GCCTCATTAGAATCTCATTCAACTCTTGTAAAACATGTTCAGATAAATAC
AAATTTAGTTATCTAATCTTTTAAGGACCATTGAAATAAGGATTTATCTA
ATTTAAGACAAAAAGACTAATTTATGTACTCTTTACTCAAGACTTTGCTC
CTCGCATATTCCCATTCTGTAATGGGCTGTTCCTATACAGGGGGAGGgct
ggacgaaccttttcaggccaaaaataattcttgaaaatgtgtggataccc
atggaaaatagcaaaattagcAATTACCCTTggagaaatttattttcata
ccttaaaggacgaacaaaaataattttttgccacCTGGAAGTTTTAGAAT
AATATTTACccccctggaaaaataaaaaaaccttgcCTTAGagcccctgg
aaattcttcctTTGCTTAGACACCTGAAAATGTTTGTCCAGCCCTTATGG
agataaaatggaatgacccaatGTACAGCAATTACGGAATTCATAGAAAA
AAGACAATAACTCTTTTCTACAaaatttttgtctaattttgaTCTTTCCG
CCCAGATTCACAAAGTCAGTTGCAACACTTACAGAAACATAATGAGGCTC
ACTATTGGCTATTTTCGGATTGTGACTATTGGAAAGTCATCATTTATttg
caaattgaaaatattttttactctTTGTAATTGCAGGATGGGAAAAAGAT
TCATACGGTTACCATGCAGACGATGGCCATTCATTCTGCGCATCAGCTGC
TGGTGAAGCCTATGGGCCAACATTCACAACAGGAGATATCATTGGATGTG
GTTTGAATTTGATTAACAAGACTTGTTTTTATACCAAGAATGGTGTCAAC
CTTGGAATAGCATTCAAAGATCTTATTGTAAGGGCTTTATATCATTATGT
GGAATTTTTGCTGAAATGGTTTTAAACCAGGGATGAGTGTAATTTCCAAA
TAGATTACGTACATTACAATAAGCAAAAACTACTTAAAAAAGCTAttgat
taataaaaaaatagaatctTTAGGAAGCTTATaagctaatttttttttga
ttttttcctagTTTTGAAAAGTAAATAGGGCAGGGTTAAAGGTTGGCAAA
GGTTTTGAATCTGCTCTTATCCATaggaaatgatgaaaataaatgaaaag
aatGATCGAATTTCATTAGgaatttcagtttttatttAGACTGTCTGATG
GAAATTGGGGATAACATTACAGAATGGCAGGATTTgttaccccctgaaac
ccctaGGCATATCTTCTTGTTCAGATCAAGTATTCTAAATATGTCTTAAT
TGTATTCGTtgtgattttattactttttatgacatattttctattttcag
ccaaatctgtATCCAACGATAGGTCTACAAACACCAGGAGAAATAGTGGA
TGTTAATTTTGGACAacaagattttgtttttgatattgaGGAAATGAAAA
AGGTTTATCATCAAATGATTTTCTGAGTATTCCTGGAGTATTTTCATCTC
GTGTTTTATTTTAATGAGTGCCTGTCCTGAAGTCTcatttagaaatttga
aaaattttttatcagagTATGTGTACAGTTTATGCTCTCTAACTCGACAT
CCTACTATTCAATACATTCCATGATCCGATAATATTGTAGTCAAAtaccg
tcaacaagaaattcTCATAAACGACAAGGGGATAGGTAGAGCCATTTGat
atgctcccttattcgatgaaaaatcCTATTCCCCTTGTAAATCGACAAGC
ACACGCTGAACGAACTCAAAcacattttatttgaaaactcCAAACCAACT
GTTCGGTGTGGGAGGTGTTCCTCCTACACTGTTTTGTTTGAAGAATCTCA
AATGACCAGCACACAAtaacaacagaccctctacgaagatgaacttttaa
aatttcgtTTGATCGGGTCTGTTTACTGATAAACCAAATAATTTCCATTC
TCTTTAACTAGAAATTACAAGCTTCAACTTTGAGGATTATCGAAAACTTT
CCGGTTAGTACTGATGATGGCAGTTGGCATGCAACATTGCAAAGGTTTGT
TTGTCTGTGTGACTGTTTTTAATCTTATGGAAAGAATAATTTATAAGCCT
AACGCTTACGATTTTTTCGTCATTACATCTGCGAGTTTTTTCTGGTTTGG
TAAAGTTAAGTAACGGAAATTTTCTACGATTGCTGATGCGAAAGCGTTCG
AGTTTGAAAAAGCGATTCTTTTCGCAAATAGAATATTTTCTTCTCCATCA
TTATAAATAGGGTAAGTTAAGTAAAACCTGAAAAGCCTCCATGCTCTAAC
ATTGGGTTAAATCTggtttcatttattttcatagGATTGTATCAGCATAT
CTGGTACATCATGGATATTGTGCAACTGCTGAAACGTTTGCCAAAAGTAC
TGGACAATCCATCGCTGAAGAACTCTCATCTATACGAAACAGACAACgta
agttttgaaaattgaaaatcagtTAAGCCACTATGCCCCTTTACCAACTA
ATTTAAGATATTATATTTGCATACTATTTAGCCTGCGTTTGATCAAGTTT
CTTGGTTTGATAGCATCAAATGCGATGGAAATGCATCAAAGTCGGATATT
TCTTGAATGTTTCTTCTCATACAGATTAAGGGCCTAAGGGTTGATGGGTA
TACCCCTCACATTCAATAAGTAACGACAAGGTTTCCCTCTTTGGCTATCT
tcagtgttgcaacttttctTATCTtcagtgttgcaacttttccgtctgta
gacggatatccgtccagttgagatacaaatatatcatttccGTCTTACCA
GTAAGAGGGTTTTTGGTTCAAATCTAATTCAGACCATCTAATCCTAAGGT
TTTCGTCCATATTCAGGGtatctacgggaccttgaaaaccttgaaaacct
tgaaaaccttgaaaatgaaccacccaaccttgaaaaccttgaaaactaac
aattttctgggaaaaaccttgaaaaccttgaaaaattgttaaaaaccttg
aaaagcacttCTTCCTATTCATCATTTTTATCATACAATCTTTTCAATAG
GGCAGTAGCTGAGTAACTCTTATAGGTTCAGATTAGTTTGGAGTTTGAAT
GCTCTTATTTTTGAGTGGTAGGCTTTTTTCATTCATTACCGTATACTATA
TTATGTTGGTTACTTTCATGAACATATAAAGGACTGGACCTctatctcct
ttgtatttttgtaataaGCACTGTTAGCTTCGTTGCTGCCtcttaaaaaa
acataaaataaacaATAGATCTTgagggaataccttgctaacaacgtcca
AAACTtggactaatatttctaaattttgactcaaaagtatggaataatTT
CAGATGGTTTGGGATTCAAactatgacacaggctctcaactttgacatac
tattttttcaagtcattaaaaaaaagtgattcaaaattatacacgcagtt
gaaattctgaattttagcgttgaaaaatgttgcatatattgcaaacttat
gaaaaatttcatcaaatttcgcCGGCTCAATActctaaaaaattaaattc
gcTAGTCTCGAAAATCTATTCGCTGACCGATGAAATTTTGCAGCTAACTT
ATTTCTATCCAGTCattcgaaaagtaagaataaCTAAGTACGTTCCTAAA
CTGATTGTCATgaggaaatttccaaaaaaccgcctgcggcgctaaaccTT
TATAACATTTAAAGAATATTCTATATCCCCCTGTTTCTTTTGCGATTCTG
TCGCAACGAATGCAACATATTCTCATTAGCtgagttttttttacaaattt
tcattctgtttgcatgagccctaagaaatcgggggcgtcttggaataatg
accgttcatcaataaaatttcgagGATTCCTTAAAGCAATTCTTTTTGCA
ATTCTTTTTGCAAttgatttttgtagaaaaaaaaaatctaaaacaaggcg
ttttttagccattttaaagagccaaaatgtaaattttcttggttgcgcct
cctcggtcACTGTAAACATTTGGTGGGAGCTGGagtaagaatttcttttt
gtggTATTGTTCTCGAGAGGGAGATAGGAATTTAACTATGGAAATAATTC
ATCGGTCACCAAAAGCGAATAAatcctctttttttctttcttctaccact
ctgaaaaaaaaaatcccctGTAGAGAGCCATGTCAACTGaatatcaaaaa
accttgaaaagtgccaaaatttttgcaaaaaaaccttgaaaaaccactta
aaaatgaccaaaaaaaccttgaaaaccttgaaaatccccaaaaaaaaTTC
GTAGACACCCTGATATTCACAAAACCTAGTTGCAACATTGTATCTTGATA
TAAGTCAATTTTTTAACGGGAACATCCGaaaaaaaGCCGGGATTAGACTC
TTTTATGttattaaaaatagaaacacagtgTTCAGAGTCCGGCAAATACA
aagtcatcttgacttacgcatatcgaGAATACCTAAATGAACTATTTATT
GAACAGGTATTCAACGCCTCATTCTGTCTGGAAGAATCAGTGAAGCAATT
GATGCTATTCAAACCCTATACCCTGGCCTATTGGACCAAAACTCTgatct
atttttcaaattgaaatgtCGTCAATTCATTGAAATGGTCAACGGTTGCG
ACGGAGAAGTCAAAACGTACGCGCACAGCCCTTCACGTAGCCTACGTAAC
AGCCCGTGTGCTAGTCCTTCGCGTAGCCTGTCTACCAACTCTAATCCACC
ATCCTCTCTTGTGCGGAACTCACAACAAAATAATTCGAATATGGACATAA
CGCCATCTACTAGTAGTGAAAATGCGGGTGGCTCAGCCCCTCCCTTAGCA
ACCAATGGCGTTTCC Coding sequence (CDS) from alignment at sc0000019_pilon:432405..439569+ >XLOC_041997 ID=XLOC_041997|Name=XLOC_041997|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0000019_pilon:432405..439569+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCCCAAAAATTTCAGTAGACGATCGTATTGCATCCTTGTATCCCTT
TGTTAATGAAGCAGAAACACCTTTACCACGATCATGGAGCAGTCAGGATA
AATGTAGCCATATTGGATTATCGCAAAATAATCTGAGGGCCCACTATAAA
GATGAGCCCAAAAATTTCAGTAGACGATCGTATTGCATCCTTGTATCCCT
TTGTTAATGAAGCAGAAACACCTTTACCACGATCATGGAGCAGTCAGGAT
AAATGTAGCCATATTGGATTATCGCAAAATAATCTGAGGGCCCACTATAA
AGGGGTTGGTAAAACACACAAAGATGCAGCCTCTGCAAGAGCTTCATACC
CTATTCCTGCTGGTTGTGGCCTCTATTATTTTGAAGTCAAAGTTATCAGC
AAAGGAAGAGACGGGGGTTGGTAAAACACACAAAGATGCAGCCTCTGCAA
GAGCTTCATACCCTATTCCTGCTGGTTGTGGCCTCTATTATTTTGAAGTC
AAAGTTATCAGCAAAGGAAGAGACGGGTATATTGGTGTTGGTCTGTGTGC
ACATGGAGTCAATACGAGCAAACTACCAGGTATATTGGTGTTGGTCTGTG
TGCACATGGAGTCAATACGAGCAAACTACCAGGATGGGAAAAAGATTCAT
ACGGTTACCATGCAGACGATGGCCATTCATTCTGCGCATCAGCTGCTGGT
GAAGCCTATGGGCCAACATTCACAACAGGAGATATCATTGGATGTGGTTT
GAATTTGATTAACAAGACTTGTTTTTATACCAAGAATGGTGTCAACCTTG
GAATAGCATTCAAAGATCTTATTGATGGGAAAAAGATTCATACGGTTACC
ATGCAGACGATGGCCATTCATTCTGCGCATCAGCTGCTGGTGAAGCCTAT
GGGCCAACATTCACAACAGGAGATATCATTGGATGTGGTTTGAATTTGAT
TAACAAGACTTGTTTTTATACCAAGAATGGTGTCAACCTTGGAATAGCAT
TCAAAGATCTTATTccaaatctgtATCCAACGATAGGTCTACAAACACCA
GGAGAAATAGTGGATGTTAATTTTGGACAacaagattttgtttttgatat
tgaGGAAATGAAAAAGccaaatctgtATCCAACGATAGGTCTACAAACAC
CAGGAGAAATAGTGGATGTTAATTTTGGACAacaagattttgtttttgat
attgaGGAAATGAAAAAGAAATTACAAGCTTCAACTTTGAGGATTATCGA
AAACTTTCCGGTTAGTACTGATGATGGCAGTTGGCATGCAACATTGCAAA
GAAATTACAAGCTTCAACTTTGAGGATTATCGAAAACTTTCCGGTTAGTA
CTGATGATGGCAGTTGGCATGCAACATTGCAAAGGATTGTATCAGCATAT
CTGGTACATCATGGATATTGTGCAACTGCTGAAACGTTTGCCAAAAGTAC
TGGACAATCCATCGCTGAAGAACTCTCATCTATACGAAACAGACAACGAT
TGTATCAGCATATCTGGTACATCATGGATATTGTGCAACTGCTGAAACGT
TTGCCAAAAGTACTGGACAATCCATCGCTGAAGAACTCTCATCTATACGA
AACAGACAACGTATTCAACGCCTCATTCTGTCTGGAAGAATCAGTGAAGC
AATTGATGCTATTCAAACCCTATACCCTGGCCTATTGGACCAAAACTCTg
atctatttttcaaattgaaatgtCGTCAATTCATTGAAATGGTCAACGGT
TGCGACGGAGAAGTCAAAACGTACGCGCACAGCCCTTCACGTAGCCTACG
TAACAGCCCGTGTGCTAGTCCTTCGCGTAGCCTGTCTACCAACTCTAATC
CACCATCCTCTCTTGTGCGGAACTCACAACAAAATAATTCGAATATGGAC
ATAACGCCATCTACTAGTAGTGAAAATGCGGGTGGCTCAGCCCCTCCCTT
AGCAACCAATGGCGTTTCCGTATTCAACGCCTCATTCTGTCTGGAAGAAT
CAGTGAAGCAATTGATGCTATTCAAACCCTATACCCTGGCCTATTGGACC
AAAACTCTgatctatttttcaaattgaaatgtCGTCAATTCATTGAAATG
GTCAACGGTTGCGACGGAGAAGTCAAAACGTACGCGCACAGCCCTTCACG
TAGCCTACGTAACAGCCCGTGTGCTAGTCCTTCGCGTAGCCTGTCTACCA
ACTCTAATCCACCATCCTCTCTTGTGCGGAACTCACAACAAAATAATTCG
AATATGGACATAACGCCATCTACTAGTAGTGAAAATGCGGGTGGCTCAGC
CCCTCCCTTAGCAACCAATGGCGTTTCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:432405..439569 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 808-1164:6809 |
| Aaloc | 694-804:4636 |
| Aaloc | 610-690:4262 |
| Aaloc | 508-609:3651 |
| Aaloc | 319-507:2989 |
| Aaloc | 265-315:2205 |
| Aaloc | 154-261:722 |
| Aaloc | 1-150:1 |
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