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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:1074528..1078572+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041951 ID=XLOC_041951|Name=XLOC_041951|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4045bp|location=Sequence derived from alignment at sc0000103_pilon:1074528..1078572+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCGAGcgaggaaaaaaggaaaaaaatcggATGTGATTACCGCAGA
AGAAGCTACGCAGGAATTGAATGCTTTGCAGCCGAAGAAAATCTCACCGA
AAAACTATGACCAAGACTATAACTTAGAAACACAGATTTTAGATAATAAA
AAATTAGTTTCTAGCAaccaagaaaaacagttttcatACCTTTTAGGGAA
CTCAAAACACGTACCAGACCCGATGAAAGTCATGGAAGAGCTTCTTGAAC
GTGAATGGGGTGATTACTTTTTGTTTGATGAAGGGGAATGCAAGTCCGAA
GCAAtttttttCCCCTTTTGCTACATTTCAAACCAATGCACTGGTAAACC
CTCCGGTGCCATTCTTGATAACAACATTAAGAAAGAAATGGAGAGgctct
tgaaaaatttaaaagaacatcGCCCAAAAGATTGGTTGATACGCGAAGTA
TCATCTTTCATTGCTAGTCAACCAAAATCTGATGACATATTTGATAGTAA
GGCATTCGAGAATTGGAAACTAAACCTGAAAATTACGTACATCATTCGTG
ACCTAACCGGAGCTAACAAGATTGCCTTACCAGAGAcaatatcaaaaaat
ttcattgaGGATTGTATCAAACGTGTTTCATCACACGAGACTTTGTCAGA
AATTAAAGACTTTCTTGAAAAGCTTGAAAAGTGCAAAAAACACAgaaata
ttaaagaaattgtaaacgATAAAATAGATTCGTTAAACATTGATGATTCC
AATCTAAACAAGCTTTTTAATTTGGAATTTTCAACTCTTGGAAAGGATGT
CGAGAAATGGTTCCGTGAGCAGCTCGACCCATTGAAGGACGGAATTCTTA
AAGAAGCCGTAATTCTTTGCCCGACCATATTTTTCAACGTTGAAGAGAAA
AAACACAGGGAAATGGattgtttcattattttttataagcgcAAATTGAT
CATTTCAATTGAGATGAAAAGAACAATTTATACCGATAGCGTGTTTAAGC
AAATAGATAAAAACCATCGTCTTTTTGAAGAGAAACTTGGCAATCAGTTT
TCTTCTGAATGGAGCTTTTTTCCAGTCGTATGTGCCAAGTTCAGCGACGG
GATCAATGTCAAAAGCAAGCACTTCATAACCATGGAAACCAAAGTCGACG
AATGGTTACAGGATGTATTCGAAGATTTTAACGAAATcccacaaaatcaa
aaaacttctcgtgatgatttaaaaaaagtactGCAAATTTTAGTTTATGC
CCTTCATGCATCAAACAAATTTCAGAATTCACAGATAACAAGCTCCAACT
GGGTTTCGTATGTCACCGGCGCAATTGAAAACACCgcaacagctgaaaat
attttgttttactCAAAAGAACAATTTGCCATTATGAATAATCGTGATCA
CAATAAGCTGATCATCTCAGCTGGCTTTGGAACTGGAAAGAGTACCTTGC
TGAAAGAGAAAGCGATACAGTTGAAAAACCATTTCTGCAAAGGAGAGGAG
ATTGTTTATATATTAGGAGAAAGACCACGGAGAGATTCTCATACCCTGTT
TTATCATCGAATGAAGGAAGAGTTGGAAGTGAAGCACAAAATTAAAGTCA
TGGAGCTTGCCGCAAAAGTAAGTTTCCTGTAGTTTAAGTCTACAGTAAAG
TATGCAACATGGGTCGTCTCACCATCATTCACGACAAATAAGCCTATTCC
ATAGGATTCGTGCCTCTGTTATACATGCTgcattttctattcaatttacg
GTTgtcccggaaaaaaagtatcgataaaaaaagtgaaaacttaaaattta
atgttattcattatttgacgtttcggtgtcttctttgcaccatGACCACA
AGACAAGTATagtaaaataaattcaaaacgaatttcaatttacaacattc
aaaaaatcacaaaattaaaaattactaCCAGGTAATTACAAGTTGTTAAA
TTTCACAAAGGAACGCATACATCTTAAAAGAGCTCAAgggggggggTGGT
GAAGAGACATGCTCATTCAAGTCCGGTTTGAGCTCCCTTATGATCAGCAT
ttcttttatataaagctcttcatggtaattaaaattaaatttttagtttt
cactttttttatcaaatttatctgGCCCAGCaaaaaaaGAAGTATCGAGT
TCAAACATGATTCTGACTAGGTTTTtgctatagaagtggtacgactatcg
atactttttttcgagACACCCTGTACAGGAGGGAGAATGCACaaatactt
gaaaatttcacttcgagaaagaagatttttcgtcacttttctaTTGATTT
AGGAACTCAAGAACAAACTGTTTGGGCGCGTTCACACTGcaaaagcagcc
ggcgaggcgaccttttttacgatgtgttctgagagcatatttcagctaga
aattttaatctgttctgatcagaacttcgaaaattaatcagctagaaatg
atgtgttctggtgagacaggggtataatatcaaggtcatctaacgcgttc
ttgttgtctaggtaaccctagaaagcttcagaacacatcttttaaggaaa
aaggggtataatcaagagaaagttgatgtaatcttgttgcTTAGTAACCC
TAGAagttttcagaacacatctttcgtggataaaaacaaatatcttacga
atttattttggcaaactttttttcctagattttagaacacatcaaaccat
aaagtagtgataagtttagggagacaaatagtgcgataaaggtttcctag
aaatcagaacacatcattcgatcatttgtataaaaaattgaaaggtcata
acatttggtctcctagaagataagaacacatatttttaaataatctcttc
gccggctgcttctgacaCTGGAAGGTTTCCTTAGTAAAACTGTAGTTgta
aaatcttttatgttttacaATAGAAGCGTGCACACAACAATACCTCAGAT
TTCCTCTTGATGACATCCAGCTTATAAAGATGATACAAAGTTTAATAAAg
gcattaaaaaaaattttgtggatAAAGGAATTCGTGAGGTCTGTCCCTGA
GGTTCACAAAATGCACTGCTTGGaactcttttttaaattttctacttttt
acaTGAGCTTTACTGGGGGACAAATGGCAATTTACATTACAGttaaaaat
cactaaaatggtattcttaggttcTCTTGCCTAATCCATCATGGTGCTAT
TTCaagcatattcttattttttttgaccaatttcatcatgaatattctta
taaaaaagcatgtagtGCTTAGTTGTACACAAATCTCATTTGTATTACCT
TTTTGTTATTACTCAGGATGGGAAAAAACCTATTGACGTAATCAGAGAAC
GAAACACCAAAGGAGCGTTCCTCGACGAGTATCATTTACAAAACAATGAC
CCGTTTTTGAAGGAACTTTCAGCTCTCGTAGATTTCTTATGGGTGGTTCC
TTCTACCAATTCACTACACGTTTTTCATCatgaatttccaaattttgaaa
aagaatacaCCGTGCTTCGTCTCGAAACCAACTTTCGAAACACTAAGAAA
ATGGTTGCAGACATAAAAAACAGAGCTTTGGAAAACGATTATCGATACAA
AGAAGGAATAGTGATGCCACTTGAAAATTCCCCTGATGGTCGTGAACCAA
CAGTTGTCAAAACATTCAAGGATGGAAtgcaaaaagcaaagaaaagcaAT
CAAGAAGGAACTTGGGGCTCGATTTTAGTAATTGCAAAACCTTCTTACAA
CTTATCAGATGACTTACATGGTTTCAAATGGAAATGGTACAGTACAGATG
aaaggaaaaatgatttttcaaaaaataaatctaccGACGATTCTGGTGAC
AATCCTTACACGTTTCTTCTCAAAAATGAAGCTGTTTTGGTTATTGACGA
GCCTTTGTCTCTTGGCTTTGAATGGCCTACTGTAATTGTATTTGAGGGTA
TGGAAGCTGATGTTGTTTACCATGACATAAACTATTTTATGAGATGCCAA
ACACATCTTATAATTGTGGAGAAACCGAAGAAAGCAGATTCTTAG Coding sequence (CDS) from alignment at sc0000103_pilon:1074528..1078572+ >XLOC_041951 ID=XLOC_041951|Name=XLOC_041951|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4692bp|location=Sequence derived from alignment at sc0000103_pilon:1074528..1078572+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCGAGcgaggaaaaaaggaaaaaaatcggATGTGATTACCGCAGA
AGAAGCTACGCAGGAATTGAATGCTTTGCAGCCGAAGAAAATCTCACCGA
AAAACTATGACCAAGACTATAACTTAGAAACACAGATTTTAGATAATAAA
AAATTAGTTTCTAGCAaccaagaaaaacagttttcatACCTTTTAGGGAA
CTCAAAACACGTACCAGACCCGATGAAAGTCATGGAAGAGCTTCTTGAAC
GTGAATGGGGTGATTACTTTTTGTTTGATGAAGGGGAATGCAAGTCCGAA
GCAAtttttttCCCCTTTTGCTACATTTCAAACCAATGCACTGGTAAACC
CTCCGGTGCCATTCTTGATAACAACATTAAGAAAGAAATGGAGAGgctct
tgaaaaatttaaaagaacatcGCCCAAAAGATTGGTTGATACGCGAAGTA
TCATCTTTCATTGCTAGTCAACCAAAATCTGATGACATATTTGATAGTAA
GGCATTCGAGAATTGGAAACTAAACCTGAAAATTACGTACATCATTCGTG
ACCTAACCGGAGCTAACAAGATTGCCTTACCAGAGAcaatatcaaaaaat
ttcattgaGGATTGTATCAAACGTGTTTCATCACACGAGACTTTGTCAGA
AATTAAAGACTTTCTTGAAAAGCTTGAAAAGTGCAAAAAACACAgaaata
ttaaagaaattgtaaacgATAAAATAGATTCGTTAAACATTGATGATTCC
AATCTAAACAAGCTTTTTAATTTGGAATTTTCAACTCTTGGAAAGGATGT
CGAGAAATGGTTCCGTGAGCAGCTCGACCCATTGAAGGACGGAATTCTTA
AAGAAGCCGTAATTCTTTGCCCGACCATATTTTTCAACGTTGAAGAGAAA
AAACACAGGGAAATGGattgtttcattattttttataagcgcAAATTGAT
CATTTCAATTGAGATGAAAAGAACAATTTATACCGATAGCGTGTTTAAGC
AAATAGATAAAAACCATCGTCTTTTTGAAGAGAAACTTGGCAATCAGTTT
TCTTCTGAATGGAGCTTTTTTCCAGTCGTATGTGCCAAGTTCAGCGACGG
GATCAATGTCAAAAGCAAGCACTTCATAACCATGGAAACCAAAGTCGACG
AATGGTTACAGGATGTATTCGAAGATTTTAACGAAATcccacaaaatcaa
aaaacttctcgtgatgatttaaaaaaagtactGCAAATTTTAGTTTATGC
CCTTCATGCATCAAACAAATTTCAGAATTCACAGATAACAAGCTCCAACT
GGGTTTCGTATGTCACCGGCGCAATTGAAAACACCgcaacagctgaaaat
attttgttttactCAAAAGAACAATTTGCCATTATGAATAATCGTGATCA
CAATAAGCTGATCATCTCAGCTGGCTTTGGAACTGGAAAGAGTACCTTGC
TGAAAGAGAAAGCGATACAGTTGAAAAACCATTTCTGCAAAGGAGAGGAG
ATTGTTTATATATTAGGAGAAAGACCACGGAGAGATTCTCATACCCTGTT
TTATCATCGAATGAAGGAAGAGTTGGAAGTGAAGCACAAAATTAAAGTCA
TGGAGCTTGCCGCAAAAATGTCGCGAGcgaggaaaaaaggaaaaaaatcg
gATGTGATTACCGCAGAAGAAGCTACGCAGGAATTGAATGCTTTGCAGCC
GAAGAAAATCTCACCGAAAAACTATGACCAAGACTATAACTTAGAAACAC
AGATTTTAGATAATAAAAAATTAGTTTCTAGCAaccaagaaaaacagttt
tcatACCTTTTAGGGAACTCAAAACACGTACCAGACCCGATGAAAGTCAT
GGAAGAGCTTCTTGAACGTGAATGGGGTGATTACTTTTTGTTTGATGAAG
GGGAATGCAAGTCCGAAGCAAtttttttCCCCTTTTGCTACATTTCAAAC
CAATGCACTGGTAAACCCTCCGGTGCCATTCTTGATAACAACATTAAGAA
AGAAATGGAGAGgctcttgaaaaatttaaaagaacatcGCCCAAAAGATT
GGTTGATACGCGAAGTATCATCTTTCATTGCTAGTCAACCAAAATCTGAT
GACATATTTGATAGTAAGGCATTCGAGAATTGGAAACTAAACCTGAAAAT
TACGTACATCATTCGTGACCTAACCGGAGCTAACAAGATTGCCTTACCAG
AGAcaatatcaaaaaatttcattgaGGATTGTATCAAACGTGTTTCATCA
CACGAGACTTTGTCAGAAATTAAAGACTTTCTTGAAAAGCTTGAAAAGTG
CAAAAAACACAgaaatattaaagaaattgtaaacgATAAAATAGATTCGT
TAAACATTGATGATTCCAATCTAAACAAGCTTTTTAATTTGGAATTTTCA
ACTCTTGGAAAGGATGTCGAGAAATGGTTCCGTGAGCAGCTCGACCCATT
GAAGGACGGAATTCTTAAAGAAGCCGTAATTCTTTGCCCGACCATATTTT
TCAACGTTGAAGAGAAAAAACACAGGGAAATGGattgtttcattattttt
tataagcgcAAATTGATCATTTCAATTGAGATGAAAAGAACAATTTATAC
CGATAGCGTGTTTAAGCAAATAGATAAAAACCATCGTCTTTTTGAAGAGA
AACTTGGCAATCAGTTTTCTTCTGAATGGAGCTTTTTTCCAGTCGTATGT
GCCAAGTTCAGCGACGGGATCAATGTCAAAAGCAAGCACTTCATAACCAT
GGAAACCAAAGTCGACGAATGGTTACAGGATGTATTCGAAGATTTTAACG
AAATcccacaaaatcaaaaaacttctcgtgatgatttaaaaaaagtactG
CAAATTTTAGTTTATGCCCTTCATGCATCAAACAAATTTCAGAATTCACA
GATAACAAGCTCCAACTGGGTTTCGTATGTCACCGGCGCAATTGAAAACA
CCgcaacagctgaaaatattttgttttactCAAAAGAACAATTTGCCATT
ATGAATAATCGTGATCACAATAAGCTGATCATCTCAGCTGGCTTTGGAAC
TGGAAAGAGTACCTTGCTGAAAGAGAAAGCGATACAGTTGAAAAACCATT
TCTGCAAAGGAGAGGAGATTGTTTATATATTAGGAGAAAGACCACGGAGA
GATTCTCATACCCTGTTTTATCATCGAATGAAGGAAGAGTTGGAAGTGAA
GCACAAAATTAAAGTCATGGAGCTTGCCGCAAAAGATGGGAAAAAACCTA
TTGACGTAATCAGAGAACGAAACACCAAAGGAGCGTTCCTCGACGAGTAT
CATTTACAAAACAATGACCCGTTTTTGAAGGAACTTTCAGCTCTCGTAGA
TTTCTTATGGGTGGTTCCTTCTACCAATTCACTACACGTTTTTCATCatg
aatttccaaattttgaaaaagaatacaCCGTGCTTCGTCTCGAAACCAAC
TTTCGAAACACTAAGAAAATGGTTGCAGACATAAAAAACAGAGCTTTGGA
AAACGATTATCGATACAAAGAAGGAATAGTGATGCCACTTGAAAATTCCC
CTGATGGTCGTGAACCAACAGTTGTCAAAACATTCAAGGATGGAAtgcaa
aaagcaaagaaaagcaATCAAGAAGGAACTTGGGGCTCGATTTTAGTAAT
TGCAAAACCTTCTTACAACTTATCAGATGACTTACATGGTTTCAAATGGA
AATGGTACAGTACAGATGaaaggaaaaatgatttttcaaaaaataaatct
accGACGATTCTGGTGACAATCCTTACACGTTTCTTCTCAAAAATGAAGC
TGTTTTGGTTATTGACGAGCCTTTGTCTCTTGGCTTTGAATGGCCTACTG
TAATTGTATTTGAGGGTATGGAAGCTGATGTTGTTTACCATGACATAAAC
TATTTTATGAGATGCCAAACACATCTTATAATTGTGGAGAAACCGAAGAA
AGCAGATTCTTAGGATGGGAAAAAACCTATTGACGTAATCAGAGAACGAA
ACACCAAAGGAGCGTTCCTCGACGAGTATCATTTACAAAACAATGACCCG
TTTTTGAAGGAACTTTCAGCTCTCGTAGATTTCTTATGGGTGGTTCCTTC
TACCAATTCACTACACGTTTTTCATCatgaatttccaaattttgaaaaag
aatacaCCGTGCTTCGTCTCGAAACCAACTTTCGAAACACTAAGAAAATG
GTTGCAGACATAAAAAACAGAGCTTTGGAAAACGATTATCGATACAAAGA
AGGAATAGTGATGCCACTTGAAAATTCCCCTGATGGTCGTGAACCAACAG
TTGTCAAAACATTCAAGGATGGAAtgcaaaaagcaaagaaaagcaATCAA
GAAGGAACTTGGGGCTCGATTTTAGTAATTGCAAAACCTTCTTACAACTT
ATCAGATGACTTACATGGTTTCAAATGGAAATGGTACAGTACAGATGaaa
ggaaaaatgatttttcaaaaaataaatctaccGACGATTCTGGTGACAAT
CCTTACACGTTTCTTCTCAAAAATGAAGCTGTTTTGGTTATTGACGAGCC
TTTGTCTCTTGGCTTTGAATGGCCTACTGTAATTGTATTTGAGGGTATGG
AAGCTGATGTTGTTTACCATGACATAAACTATTTTATGAGATGCCAAACA
CATCTTATAATTGTGGAGAAACCGAAGAAAGCAGATTCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:1074528..1078572 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1618-2346:3317 |
| Aaloc | 1198-1617:1198 |
| Aaloc | 430-1194:433 |
| Aaloc | 280-426:286 |
| Aaloc | 1-279:1 |
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