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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000053_pilon:1069346..1075558- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041925 ID=XLOC_041925|Name=XLOC_041925|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6213bp|location=Sequence derived from alignment at sc0000053_pilon:1069346..1075558- (Clytia hemisphaerica_ch_hm2_pilon)
AATAGGTGTCAATCAAAGATGTTGGAAGGGCGTGTTCTCCCGTATCTTAC
ACTTCTTTTCTGTTGCATGTTGGGTAAGTACACCCTGTCTCACAGCCTTG
GGCTTTTTTCCTCAGTGGGGATAAAGATTCCTATTGAAATCCCAATGTGG
ATAGAAATTCCTTTGTTCCAAAGTTAAAAAATCCAGTGGGGATGGTTTTG
GAGTGCAATTTTTTAAACATTGAATGTCGAATGGGGATGAAATCAAAGTT
AATTTTCCAGAAGGGCTGAAATTCAAAGGTATTTTTCCACGGGGGACGAA
CTTTTTGCCAAAATTTCCGCCCAGCGGGTCTGTGACACAGGGGTGTGTAA
GTGTTTTGTCGTTCTCATTGACAGAGTTGCCTGTGCACTTGTAAAAAGGG
TAGAACTTCGCTCGTGAACTTCATAATAAAAATAAAGCACCCTTTATTGA
GTGGTATATTTATCTTTTATGTATGAAATTTATGTTCATTTTTGATCTCA
TTACCTAGCACACGGTCTCGTTCCTGAATTAGTGAACCGCGGACGAACGC
GAACTGTTCCTGTTCAAATGGACATGATCTCAGGTAAGCATTATGGATTC
TCCTTTCTTTTCACTTTTCCCCTGTAAGAACTAAAGCTACAAATATTACA
AGGCTTTGTTTTCACTAGGAGGGCCGGGAATTACTACAACCCTCTCTCAG
TGTCCCGATTGTCATACTTTAGGTAGTTTGGATGAAATATCTTGTTCTTA
TTGGATCGGGGTCTCAAATTATATCAGTATTTGCAGCTCAAGAAATACGA
GACCCAACTGGCACACAACGTTGTGTCAACGTTCATCTAACGTACACAAC
GTCCATATAACGTTAGATAAACGTAAAAACAACGTTATGTGGGGAATGAG
ATGTTTTCCATCGAAAGGATTATCTCAACCTTTTTTCCATCGGAAACATG
AAAGTATAAGGGGATATATTTTTCCTGAAATGGACAAACCTTTTCTATCT
CATTTACAGATAACAGTATTACAATATGTACCGGCGCCAAAAGGTCGTTA
GCGTGTCGTGAAGGAGCCAATATTGCGGTCACCAATGTATTTTGGGGCCG
ATTATCGGACAAAGTTTGCCCATCGGACGATGGCGATCCTATTGTTGATT
GCGATGCGGCTCCCGATTCATTAGGCTTGGTCCGCGATCAATGCGAAGGA
AAGAAGGAATGCAGTCTAACTGCTAAACACAGGTACGATAATACAGTAAC
CTTTCGTTAAATCAATTTTTTAAGCTCTAACCTTATTCCTAATTTAGAAA
AGCTTGTTTATAAAAATCTTTGTTTAACTAACCGATCATTGTAAGAAACA
ATTGATCTATTAAAAATCTTGATTGCGGGTCAGAAAAAGATTTCCAGATC
AAATCTTTAGTACATTGAAAGCTTTTGGAATTAGCGTTCTAAAACAAAGT
ATAATAGTCAAATATGACATGGTTTCCACCTCTGAAATGTTGACGGATAA
CCGGCGAAAAAAGCTTTCGCCAAACGAATTGCCGATCTCGTACCTAGAGA
TACAATCGAAATCGCTATCGGAATCATAAAAAAGCGAACTGAGCGTTTGG
GTTTAAGACCACGCTCACACGCTAAGGTTCCGTTTCGCTCCGAAACGAAA
TGAATTCATTCTATTGGTTAAATTCAAGTTTTACGTCACTTCTAGTCAAT
CCAATAACTTCATTTCGTTTTGGAGTGAAACGGAACTGTTATGTGCGAGC
CTTAAGTTGGACGAATCACTATATTTTCGGAATATCAAAAGTAATAAATA
AATACTCTTAGGTGCCAAATAAACGCCCCCCCCCCCCGCTTGTTAATTTT
TCGATTTTTTCCAATCCCCCCGGACCTTATTAGGACCTCCCCTGTTTATT
AATTTCTAAAAAAATTCCCAGCTACAAAAAGGAAAATTTCTTATTTTACT
CTAAAAAGCCTAAATTTAGTCTGTTTTGACCCTTTTTAGGGTTTTTAAAG
GTCCAATTTCCAACCCCCCCGGTAATTAGAACCCCTCCCGTTTATTTAAT
TTGGAAAATTTTTCCAACCCCCCATTTATTCGAACTCCCCCGTTTATTTG
GCACCTAAGAATACAAGCATTCGTTGTGTATTTTCTTCAACTTTATTTCT
TTGCAGCTTATTACAGAGAGAACATTCATCACATTGTCCTGGTGTCAACA
AATATTTGATCGTCAAGTTCACTTGTATGCCAGAATCAAAAGGTGTTTTG
TTGTGTGATTCTGCCGAAACTGATATTTCTTGTGAGGCTGGTTGGATCAT
GCAGTTGGCTGATGTTTTCTGGGGTAGAAGGTATTGAGATTCTAGATTCT
AGATTCTAGGTTTAACTCTGTGGCCATAGTAAAGGCCGGTCTGAGCGAAA
GCTTTTTGACGTTTTTGTAAGGTCATTGGTCGGTTGAAAAATGAAGCAAT
CCCATTGGTCGAAATAGAGGTAACGGATGAAAAAACTTTTTTTTTGTTCG
TGCGAAATTTTTTTAAGACGTCATCTTTTGTTCAGGCAAAAAAGGTTAAG
AAAAAAGCTGTCGCCCATTTCGCGCGAAAGTAGAGACCGGCCTTAACTCC
CCAACTAAAACCTTTAAACTCCCATGCCCAAAGAAGAAAAGACACAGTAT
TACTTTCTTGGTAATTTGGTGTTAAGGTTTTTCAGCAAAATACTTCTTTA
AATCAAGATCGAAGGTTTTAGTACAGGCTGGGTTTCCATATTGCATCATG
GAGCTTTTTTTTCTTTAAGTGCTCTCCTGTTACAGTTTTTTGAAGTTTGT
AACAGAAGTTGTAATAAATTGTAACTTTTAAGAATATATTTCGTGGAATC
GCATTCAAAGCTAGTCTGAATCGCAGACCTCTACAAAACCCCAGGTAGTA
TAGGTCTGCTTAATGATCTACCAACCGCTTTCCGGTTCGCATAGGAAATC
TTGGCGAGTTAATAATTTGATTGACATTGATGTGTACGCAAAAACGATCG
TTTCGAACGTTTTCAATGGAATGTTTACGTTCGAAATTCGAATCCCAGAC
CAGAAAAACAAAACAGAAAAAGATAAAAAACAATCTGATGCGCGCATTAT
GTACAGTCTGTAGATTTATTTTCGACTTTTGGTTTTATAAGATATCTGGT
CTGTAAATTTATCAAAACTTTTCCATCAGCTCTTCGGTCGAAGCTCAAAA
AATACAAATATGAACACAAAAGTGATAGAAAACAACCAGAAACACTCCAA
TCTCTTCAAAGAATTGAAGCTAAGTACCTGAAAGATACAAAGGCCACACA
GTATTAAAAAGTGAAATACCAAAGCTGAAGAAAAGTTCTTTATTTGTTTT
AACATTTAAAGGCCCTTGTTGAAGGAACAACAACACTCCCTTTTGTAGAA
TCATAAAGAACTAATGTCAGAAATATTCAATATGACCCCCAAAATGTACT
GTATATACACGCTTTTTTTTATAAGAATACACTTTATAAGAATGTCCATG
ATGAAAATGGCCAAAAAATTAAGAATACGGTAAGAATGTCACCATCATGG
AATTTAGCAACTGAACCTAAGAATGCTCATTTTTAATGCATTTTAACCTG
TAGATTGCCAATTTCGATCTTAACCTAAGAATACCGTAAGAATACTTTTG
GATGATTTTCGCCAAAATGTTAAGAATATCCATGATGAAATGAAAAAACA
CCATTCTTATAAAAAAAAGCGTGTACATAACTAGAATAACTTGAAATAAT
CTGCAACATATCTGTAGAACTGACAAAACAATTATCTGGAGCCAAAGTGA
TCAACGAATCCAGTGTGGTAAAAATTTTTACACTCATACAAGTCCAAATT
CAAGCATCAAAATGTAGTTTTATGAAGTAAAATTTTGTTGGTGCACACAG
AAGATACATCAGGGCACTTAAATTCAATAAATCTAATTTTTCATCTTTTA
CAAAATCTCCACATTAAACAAGAAAGAAGGAAGAAAAACAAGCAAACTTC
CTTCCACCTACTTTTTTTTCGAAATCCAAATATATTTTCCAATCTATGAT
TTGGTGCCTCACAGAAAATTTAAACATTACGTAATGTTATATTTGTAGAC
ACTCGCCAGCTAAACATGTCTTTAGCCATATATCGGCTAAAGGCGGCAAA
TCTCTGGACAAAGGAAATATAGCTTATTAAGCATCCTCTATAAGGAGCAC
GAATCCGTTAGTGGATGCCAGCAGCCTAATTCAAAGCTGCTTTTTAAACT
TTTTTCACAGTGAAATTTGAAATTTCCGCCAACTAAAAAAGGTCATTTTC
CATCCCCTTGACATTAAGCTCCGACGCGTGCAGCTCCGGCATCTTTTCTG
GCTGAAGATTTTCTCACTGATACAGTACACTCTTTTTTGTAAGCAAAACG
TTTAAGCATACAAAAGTTCGAAGTTTCTATAAACCCAAAGAAAATCAACA
AGTCGAAGTCTAAGCATATAAATTTAAGCAAAAATCAAGGTTGAAAATGA
GATTTTGCTAAGCATATTCAGCCTCGAAACGATTTTCCCGTATGCTTATA
AAAAAAGAGTGTAGTGTTGTATCCACTGCTAACTTTCGTGTTTTGTTTAC
ACAGAGCGTCTGCAAGAACATGTGGCTTAAACGAAGGCTTCGAGTGTGAT
GCGTCAGAAACCGCCTCCAACTACCTCAAAAATAAATGTAATGGAAAACA
AAAGTGTTTGGTTCAAAATGAGGCTAATATTTTGGATCCTACCAAGAAAT
CCAGCTGTGGAGACTCTCTGGAGAAATATTTGATGTTGAATTATGTTTGC
AGTCCTGTCACAGCAAGGACGACCGCTCAACGTAAGCATGTTTTACACAT
AGATTTGTAAAGCAAAAATATAAACTTTTTTCAAGAAGCTACCAAAGGTC
AGATGTCCACAGCAAGATTGAGGGGAAAATGGTGCTTATACTTTTATTCG
GAAGCCTAGAAAATCAGCAGAACCCTTCAACAATCGATAACAGGTCTAAT
ATTCTCGATAATGTCCAAATTTTATGTCCCTTTGGGAGGAAGTCGACTTC
TAATATTTTGGAATTTTGGGATTCTTTCAGAGATTTTCGAGGGTTTAAAA
AAAGAACCCTTATGGCTCGCACATACCTAGCACCATTTTTGGCCAAGAAC
AACCCCCCTGATTGCACAACCCTTCCACATTAAAATATTTTGTTATTTCG
CAATTTAGAAGACGATGATGAAGAAAAAGAAAAAGAAAAGAAAGTTCCAG
GTACTTATGTTGTCTGTTTGTCTGTTTGTCTGTTTCGATCGTTATGATCA
ATTGTTAACCGGTTACTTTTTCGAAGCGGGATACACAACTTTTTGTACAA
TGCAATTGGTTCTTTTCGCATGACGACGGGTCTACACTGCACAGAGTTTC
CCGTCGTTAGCAAGCTCGGTCGTTACTTGACCTTGGGCAATATTTATCAG
TACAGTCCTCACTAACCGGTCATTGTATTATAATGGCCTTTTTCATGATG
TCTTCTGATGAAATCAATAATGTTAGCTGTTAGTCGATTTGTTGTCTAAA
TTATGAAAAATCTCTATGGCATTAAAGTTATGGTTAACTACTAGAGTAAT
GTGATCAAAATGGAAGATGTTCGGTCTTCTTACAGTTTTTAAGTCCTAAA
GTCTTCGTGTTTTTGACTTTTTAGACGCACCTAAAGTAGCAGAAAAGCCG
AAACCACAAGCCGCTGCCGCCATTGTAAACCCCGCCCCTAAACCAGCTGT
TCCCACCGCTACAAACACTGCAAGTACTTTATTGGCGGCGGCAAACAGTG
GAAAAACAACGACATCGAAAACATCAGGAGGATTTGCACCGAAAAATGAG
AAAAGTGAAGTGGAAGAAGAAGCAGAAGAAGCCGAGAAAAAATCTTCATC
AACCTCCTCCTCCCCAGCGAAAGAAAGCTCGCCTGATGCAACTTCAGATA
CAGCCTCTGTTCGCTCTATTCTCTCACGGGCTAAAAACATTCTCAAAACA
CTCGATATTGATGGAGGGGACGTCCGCAAGAAACGCTTCCGTATCGCGAG
ACCGGAAAAATCAATTTCCCCTCTCAAAAAGAAATTACAAAAGAAATCTG
ATATTGTTGAACGTAGAAAGAACTCAAAGAATGAACAAAAAATTGCACCC
CCGTCTGTCCCAGGGCCTGAATACCCTGATAACTTCATCCTCAAAAGTTG
GTATGGGAAGTAA Coding sequence (CDS) from alignment at sc0000053_pilon:1069346..1075558- >XLOC_041925 ID=XLOC_041925|Name=XLOC_041925|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000053_pilon:1069346..1075558- (Clytia hemisphaerica_ch_hm2_pilon)
AATAGGTGTCAATCAAAGATGTTGGAAGGGCGTGTTCTCCCGTATCTTAC
ACTTCTTTTCTGTTGCATGTTGGAATAGGTGTCAATCAAAGATGTTGGAA
GGGCGTGTTCTCCCGTATCTTACACTTCTTTTCTGTTGCATGTTGGCACA
CGGTCTCGTTCCTGAATTAGTGAACCGCGGACGAACGCGAACTGTTCCTG
TTCAAATGGACATGATCTCAGCACACGGTCTCGTTCCTGAATTAGTGAAC
CGCGGACGAACGCGAACTGTTCCTGTTCAAATGGACATGATCTCAGATAA
CAGTATTACAATATGTACCGGCGCCAAAAGGTCGTTAGCGTGTCGTGAAG
GAGCCAATATTGCGGTCACCAATGTATTTTGGGGCCGATTATCGGACAAA
GTTTGCCCATCGGACGATGGCGATCCTATTGTTGATTGCGATGCGGCTCC
CGATTCATTAGGCTTGGTCCGCGATCAATGCGAAGGAAAGAAGGAATGCA
GTCTAACTGCTAAACACAGATAACAGTATTACAATATGTACCGGCGCCAA
AAGGTCGTTAGCGTGTCGTGAAGGAGCCAATATTGCGGTCACCAATGTAT
TTTGGGGCCGATTATCGGACAAAGTTTGCCCATCGGACGATGGCGATCCT
ATTGTTGATTGCGATGCGGCTCCCGATTCATTAGGCTTGGTCCGCGATCA
ATGCGAAGGAAAGAAGGAATGCAGTCTAACTGCTAAACACAGCTTATTAC
AGAGAGAACATTCATCACATTGTCCTGGTGTCAACAAATATTTGATCGTC
AAGTTCACTTGTATGCCAGAATCAAAAGGTGTTTTGTTGTGTGATTCTGC
CGAAACTGATATTTCTTGTGAGGCTGGTTGGATCATGCAGTTGGCTGATG
TTTTCTGGGGTAGAAGCTTATTACAGAGAGAACATTCATCACATTGTCCT
GGTGTCAACAAATATTTGATCGTCAAGTTCACTTGTATGCCAGAATCAAA
AGGTGTTTTGTTGTGTGATTCTGCCGAAACTGATATTTCTTGTGAGGCTG
GTTGGATCATGCAGTTGGCTGATGTTTTCTGGGGTAGAAGAGCGTCTGCA
AGAACATGTGGCTTAAACGAAGGCTTCGAGTGTGATGCGTCAGAAACCGC
CTCCAACTACCTCAAAAATAAATGTAATGGAAAACAAAAGTGTTTGGTTC
AAAATGAGGCTAATATTTTGGATCCTACCAAGAAATCCAGCTGTGGAGAC
TCTCTGGAGAAATATTTGATGTTGAATTATGTTTGCAGTCCTGTCACAGC
AAGGACGACCGCTCAACAGCGTCTGCAAGAACATGTGGCTTAAACGAAGG
CTTCGAGTGTGATGCGTCAGAAACCGCCTCCAACTACCTCAAAAATAAAT
GTAATGGAAAACAAAAGTGTTTGGTTCAAAATGAGGCTAATATTTTGGAT
CCTACCAAGAAATCCAGCTGTGGAGACTCTCTGGAGAAATATTTGATGTT
GAATTATGTTTGCAGTCCTGTCACAGCAAGGACGACCGCTCAACAAGACG
ATGATGAAGAAAAAGAAAAAGAAAAGAAAGTTCCAGAAGACGATGATGAA
GAAAAAGAAAAAGAAAAGAAAGTTCCAGACGCACCTAAAGTAGCAGAAAA
GCCGAAACCACAAGCCGCTGCCGCCATTGTAAACCCCGCCCCTAAACCAG
CTGTTCCCACCGCTACAAACACTGCAAGTACTTTATTGGCGGCGGCAAAC
AGTGGAAAAACAACGACATCGAAAACATCAGGAGGATTTGCACCGAAAAA
TGAGAAAAGTGAAGTGGAAGAAGAAGCAGAAGAAGCCGAGAAAAAATCTT
CATCAACCTCCTCCTCCCCAGCGAAAGAAAGCTCGCCTGATGCAACTTCA
GATACAGCCTCTGTTCGCTCTATTCTCTCACGGGCTAAAAACATTCTCAA
AACACTCGATATTGATGGAGGGGACGTCCGCAAGAAACGCTTCCGTATCG
CGAGACCGGAAAAATCAATTTCCCCTCTCAAAAAGAAATTACAAAAGAAA
TCTGATATTGTTGAACGTAGAAAGAACTCAAAGAATGAACAAAAAATTGC
ACCCCCGTCTGTCCCAGGGCCTGAATACCCTGATAACTTCATCCTCAAAA
GTTGGTATGGGAAGTAAACGCACCTAAAGTAGCAGAAAAGCCGAAACCAC
AAGCCGCTGCCGCCATTGTAAACCCCGCCCCTAAACCAGCTGTTCCCACC
GCTACAAACACTGCAAGTACTTTATTGGCGGCGGCAAACAGTGGAAAAAC
AACGACATCGAAAACATCAGGAGGATTTGCACCGAAAAATGAGAAAAGTG
AAGTGGAAGAAGAAGCAGAAGAAGCCGAGAAAAAATCTTCATCAACCTCC
TCCTCCCCAGCGAAAGAAAGCTCGCCTGATGCAACTTCAGATACAGCCTC
TGTTCGCTCTATTCTCTCACGGGCTAAAAACATTCTCAAAACACTCGATA
TTGATGGAGGGGACGTCCGCAAGAAACGCTTCCGTATCGCGAGACCGGAA
AAATCAATTTCCCCTCTCAAAAAGAAATTACAAAAGAAATCTGATATTGT
TGAACGTAGAAAGAACTCAAAGAATGAACAAAAAATTGCACCCCCGTCTG
TCCCAGGGCCTGAATACCCTGATAACTTCATCCTCAAAAGTTGGTATGGG
AAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053_pilon | genome | sc0000053_pilon:1069346..1075558 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1090-1398:310 |
| Aaloc | 859-1086:538 |
| Aaloc | 817-855:1004 |
| Aaloc | 589-813:1609 |
| Aaloc | 415-585:4057 |
| Aaloc | 193-411:5203 |
| Aaloc | 118-189:5704 |
| Aaloc | 43-114:6214 |
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