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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000287_pilon:360748..363671- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041838 ID=XLOC_041838|Name=XLOC_041838|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2924bp|location=Sequence derived from alignment at sc0000287_pilon:360748..363671- (Clytia hemisphaerica_ch_hm2_pilon)
GGTGTGAAAACGATCGATTACGCAGGAGGTCGAGAACACGAAGATTTCAT
TAACTTCATGGTAGAGTAAGTGCTTCGATTTTTCACTTATTTCCCATTCA
AAACGCGTGACTCGGGTGTTTTTCACTCAAACGCCAGATTGAAAGTAAAA
ACTATCGCAAGATTTTGAAAAATTATGCCGCAAACAAGGAAAGCACTGGA
TTCGTCATTCCAAAAGCGTCTTAAATCTTAAGGCTTCACTTTTTCTTGCT
TGAAAAGGTTGAAGATTCCTCTCCAGCCCTTCGGGCTTTTATGAAAGTAG
GACATCAGAAATGAACATTCCTGTATAAGTCAATAGATGCAAAATAAAGT
AAATCGAACGAGTGATTGAAAGCACAGGGAACTATTGTTGAATTGAGAAT
ATTATTTATTATAGTTAACGATTCCAAAGGCTTGAAGCAGACCACGTGAC
CTGACTTTGTCATGAACAACCCCTGATAAAATTTTAGGATCACCAAATCA
TTGAATAACTTTCAAATCTATATTATTTGTTTTATTACCATAGCCCAAAA
CCACCAAAGCCAAAGCAAGTGGAGAAAGATTGGTCAGATGAAGTCAAGGA
CGTCGTCTTCCTTGAGCCGATGAACTTTGACGATTTCGTTGAAAAAGAAA
AATCCGTTCTCGTCATGTTCTATGCCCCATGTAAGTTTTGTTTGGGCGAA
ATTTTGGATGTGTAAACTTTTTTAAATTAAAATTCGATCCCTTTTTGCCT
TAAAATTTGTGTACAGATTTCAACTCTAAAACTTTTTTGAATATCATAAA
GAGTATGCGTTAGATATAATCTGTGTTCAGTGCTGATGGATTGACATATA
GTAGAAAGGCACTTATGGTGAAAATGAAACTCTCTTTAATTTGTTTTCGT
ATAAGTTCTTCACTGTTCTTTTCCAAATCAGGGTGTGGTCACTGCAAGAA
AATGAAACCAGGACTAGCTGAAGCTGCCAAGATCGTCAACAATGCTAATG
ATGTACGGGCACTTTTTATCAATATCTTCACTTTGTAAACCTAAGTTAAA
TCGGTTCTAGAACTTAAACAGTTGCAGGCTGAACTTATTTTACCCTCCTT
CCATGGGCCAAATACCATGGTCAGCTGGCTTAAGCATTTTAGACCTAAGG
CCCTTGTTTCAAAAAAATTTATTGGCCTTTTCGACTTTTTTCATGATTTG
TCGAAGAATTAAAATGCAAACAAATGGTTTTTTAAAGAGTCCAATCAGTG
TAGACCTAAAGCTCTAAACCAGCATCTAATAACATGAAAACCAGAATATG
ATTCTTCAATGGGAATCAAAATATAAAGTGCACTTACAAACATCAATTTG
TCAGATCTAACAAAATTAATAACCGCACTGTCATCATTGACAATAAAACA
AACGATTTTCTGTCAAGAGCCTTGTAAACATTCCAACAACTTCCATCGAA
ATGATCTATCACAGCTCAGTCTACCATTTTTAGCGCGGTCCGAGGATTGA
GCCGAGAACGCTCCGCGGACTCCTGCGCGGGTGAAAAACTTTAATCTGTC
CATCATTTTCTCAAGCGAAGAGTACGCGAAGCGATTCTAGCCTTACGATA
GTGCCGCGGGTCATCAATGGATAGTATTCAATTATCATTATCCCTATATT
TTCATTCCTAAAACTTTTCCAAAAAAAGGAAAAATAGAAAAGTTGTATTT
TTTACTGTTCTATTCACATACTGAATTTGAAAGATCTTCTATGTGGCGTT
TTTTTACAAACTTCAAAAAACTGATTTTTGTTCCGCCTTTGCGGGACTTT
GGCTTAAGTGCTTGAGTGCAGCATAGGGTACACAGTCCAAACATGCGTTT
CCCGTAATTTTTGTCTGAAGAGTTAGGTCTACACTGCCAATCAGGGGGTC
TTTTTTCATTTTTCCGAGGCTTTAAAAAGTCATTCTAAAATTTCCACGGG
GTGAAAGTCTGATTTCAGTTCGTCCACCCTCATTTTAAGGTATGAAAATA
TTTTCCTAGGGTACTTGTGCAAATTTCGATTCAATTTTCAATAGTTTTTT
TTTACTTGAAAAAGTTCGTCCACATGTATGGTTTTTAATGGGACAGCTTA
ATATGAAACTGTAATCTTTCCCTTTCAGATCGTTGGAAAGATAGCAGCGG
TGGATTGCGTTAAACACAGTTCGTTGGCTGGCAAGTTCGAAGTAAGCGGA
TATCCAACATTGAAATACTTCAAAGACGGAAAAGAACAATTCAAATATAG
AGGTCAACGAACGAAAGATGCCCTCGTCGATTTCATGAAAAGGTAACCAA
ATTCTTCTTTCTTTCATTCTGTTTTTTTCTATTTGAAAGTTTGATCAGAC
TTCAACTTCATTTTAGCCTAATTTTGCGAATGTTTGAGTCTACAGGCCAT
GGAAAGAGTCTAATTTTGCTTAAGATTTTCACGTTCATTGCTTATGTTTT
CCTTGCAAAATTGTTCATAATAATGAACTTGAGTGAGCGTGGTCAGCATT
TTCGATCTGACATATCTTTTTTCTAACGAATTTTAGAATGAATTAGTCTG
GATTAAAATTTGTTACCCTTTTTAAATTACCTTGGAATGCTCTATCTAGT
AAATAGTTGACGATTATAATTTTACTTTCCAGCCCTTCTGAACAAGATTC
ATCAAGCAATCAACCACCACAAAAGACGTGGGCCGAAGAATCAGAACACA
TCATTCAACTCAACGATGCCACATTCACCGAGTTCATCCGAGACAAAGAC
GTCTTTGTCGCTTTCTATGCTCCATGGTGCGGTCATTGCAGTACCATGAA
ACATGCCTTCTTTGAAACTGCAAAGAAACTGAAAGAAGATAATTTCCCAG
CCGTTTTGGCTGCTGTTGAGGCCACACAGAATAAAGATTTGGCTAAACGA
GAAGGAGTCAAAGGATATCCAACA Coding sequence (CDS) from alignment at sc0000287_pilon:360748..363671- >XLOC_041838 ID=XLOC_041838|Name=XLOC_041838|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1458bp|location=Sequence derived from alignment at sc0000287_pilon:360748..363671- (Clytia hemisphaerica_ch_hm2_pilon)
GGTGTGAAAACGATCGATTACGCAGGAGGTCGAGAACACGAAGATTTCAT
TAACTTCATGGTAGAGGTGTGAAAACGATCGATTACGCAGGAGGTCGAGA
ACACGAAGATTTCATTAACTTCATGGTAGACCCAAAACCACCAAAGCCAA
AGCAAGTGGAGAAAGATTGGTCAGATGAAGTCAAGGACGTCGTCTTCCTT
GAGCCGATGAACTTTGACGATTTCGTTGAAAAAGAAAAATCCGTTCTCGT
CATGTTCTATGCCCCATCCCAAAACCACCAAAGCCAAAGCAAGTGGAGAA
AGATTGGTCAGATGAAGTCAAGGACGTCGTCTTCCTTGAGCCGATGAACT
TTGACGATTTCGTTGAAAAAGAAAAATCCGTTCTCGTCATGTTCTATGCC
CCATGGTGTGGTCACTGCAAGAAAATGAAACCAGGACTAGCTGAAGCTGC
CAAGATCGTCAACAATGCTAATGATGGTGTGGTCACTGCAAGAAAATGAA
ACCAGGACTAGCTGAAGCTGCCAAGATCGTCAACAATGCTAATGATATCG
TTGGAAAGATAGCAGCGGTGGATTGCGTTAAACACAGTTCGTTGGCTGGC
AAGTTCGAAGTAAGCGGATATCCAACATTGAAATACTTCAAAGACGGAAA
AGAACAATTCAAATATAGAGGTCAACGAACGAAAGATGCCCTCGTCGATT
TCATGAAAAGATCGTTGGAAAGATAGCAGCGGTGGATTGCGTTAAACACA
GTTCGTTGGCTGGCAAGTTCGAAGTAAGCGGATATCCAACATTGAAATAC
TTCAAAGACGGAAAAGAACAATTCAAATATAGAGGTCAACGAACGAAAGA
TGCCCTCGTCGATTTCATGAAAAGCCCTTCTGAACAAGATTCATCAAGCA
ATCAACCACCACAAAAGACGTGGGCCGAAGAATCAGAACACATCATTCAA
CTCAACGATGCCACATTCACCGAGTTCATCCGAGACAAAGACGTCTTTGT
CGCTTTCTATGCTCCATGGTGCGGTCATTGCAGTACCATGAAACATGCCT
TCTTTGAAACTGCAAAGAAACTGAAAGAAGATAATTTCCCAGCCGTTTTG
GCTGCTGTTGAGGCCACACAGAATAAAGATTTGGCTAAACGAGAAGGAGT
CAAAGGATATCCAACACCCTTCTGAACAAGATTCATCAAGCAATCAACCA
CCACAAAAGACGTGGGCCGAAGAATCAGAACACATCATTCAACTCAACGA
TGCCACATTCACCGAGTTCATCCGAGACAAAGACGTCTTTGTCGCTTTCT
ATGCTCCATGGTGCGGTCATTGCAGTACCATGAAACATGCCTTCTTTGAA
ACTGCAAAGAAACTGAAAGAAGATAATTTCCCAGCCGTTTTGGCTGCTGT
TGAGGCCACACAGAATAAAGATTTGGCTAAACGAGAAGGAGTCAAAGGAT
ATCCAACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287_pilon | genome | sc0000287_pilon:360748..363671 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 439-729:292 |
| Aaloc | 274-435:797 |
| Aaloc | 205-273:1992 |
| Aaloc | 67-201:2381 |
| Aaloc | 1-63:2925 |
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