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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:285595..287971+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041826 ID=XLOC_041826|Name=XLOC_041826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2377bp|location=Sequence derived from alignment at sc0000251_pilon:285595..287971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGTTAACCAAATCGAGGAGTCAATCAATGCTACTTTTAATTCTATT
ATCATTGAGATTTGAAGAATCTTACCAATTACCGACGCTGTCAGAGGATT
TGAAGTTCTGCAAAGCACAACCAAATTTTAGCCAAGAACAAATGGAGTTT
TGTTACCAGAATACTAACTTGGTAAAGAATTTGATAGAAGGATATCAGTT
AGGACATCAGCTTTGCCAGGAAGCTTTCCAGAACGGTGCTGGTGGTACAC
GGTGGAATTGTACAAATAAAATTGCTAAGaacaacaaaaatgttttgttt
ggtGTTGCTCATCCAAGAGGTAATTTGATTAAATCTTTAAGCAACCTCGT
TCCCAGAGGAAATTGTACAACTCATAATCACTATTATAAAATGGCAAACA
GCAAAATAAGGGACGTGGTACGGCTTTGATCTATAATATGTACACCCCAA
CCCctagcatttattttcttataggCTCCTTAATTTTATCCCTACTGCCA
AAATTATTCTTGAACTACAGTTTCGAGTAAAAGGGCTGCAGCCAGGAGGT
AGCTTGTGTGTATCAAATtcttaaaagtttcttcaagcaggaaaaataat
tcaaatattttagacACTAtggcataatataacaaaaaaaagAGACAACC
AATTTTTGTAACACGCTCATTAAAGGGAAAACAATTAAGTTTCAGTAGTT
AGGAAAGAAAAAACGATCGTAAAATTCTATGAAACATCCATTTTGGTCAA
CCACTAGGTCCATTTGCTAGCCAAAACATACCTTGTTTTCCTATCAATTG
AAAGCCATTATCAGAAATTTTTTCCCACAATGTCAgtaaaaaaaatgttg
ttttcgtCGTAAAAAATATTGCGGGTGTCTGTAAACTTTGGAGCCATCTT
AAATGTAATTTGGTTAGTTCTACATCAGAAATATTTCTGTTTGTTATAtt
aataatacaataatgacgtCAGACTAATTATCGTACAATTAAATAAGGCA
TTTATCTCAGCATTaaacaaaattgacaaaaagtagcaaaatttcAACAT
CTCTAAACCACTGTACCAAAATATTTTACCTATTAAAACGTGTGTTCTTA
CTACACCCATAAAACTCCAATGATAGCTCAATGGTCAGTATCTTCTTCTT
CTACAATCATACCCAAATGCACATTCAAAAGAGTccataatatataaaaa
agcaaCAGGAACCCTTTCagcaaaatttcttcttcttttcattaTAGAAG
GTTCAAAGGAGCATGCTATCCTCATGTCATTCACATCAGCCGGAATGCTA
TATAATCTCATCAAAGCATGCCAAAGTAACGAATTCTCATCTTGCAAATA
TACCGACATTTACAACTGCCGACGGTCTTTATCGGGAGGCTGTTACCACT
TGGACACTCAAGTTCCCTTACGATTGATAAGAACTTTCTTCTCATcctca
aaattctcaaaatcaaGATATCAAAAATTGCTGAACCAACATAATCGGGA
GCTAGGCTTACAGGTAAGAAAGACTTTATCAATCAGATTACTGTATAATC
CATTTGCTTTCGATGGAATAGCAAGTCTATTGTAAAATAGGCTGTTGGGA
TCCTCGAACAAAGTGTGCTAGCAGTGACTTCGTAGGGCTAAGCCAATTAA
ACGacagtctctttaactcgaacctctataattcgaacaagtttcaTGGT
CCTTTCAGTtaataatgccttataaaccaatttccatatttcgaaatttt
cttaactcgaaaaaatttGTCCTCCCCATGAgtgctcgagttatggagac
tccattgaAATTCTGAAATGTCTCTTCTCTTTCATCTCAATTTGAAACTT
CTTTGTTAATTTCCTTTGTAATAAATCGCatcttaaatttcatttttctt
ttctgtttgtaGAAAGTAAAGAGTTTGATTCGTATACGATTCGGTCGTGA
ACACTTATCACCACTCAAAGGCGTTATACCATCTTTAAAAGATATTTATA
TTAACCAAAACCAACGTATCAAACGGAAATACACCAAGGAAAAAATACCT
ACAAAACTCTTAACACTAAGATCAAAACTGGTATACACATTGCGAGATGG
GCGCTTTAATTATTGTAACCAAAATGAGAATTGGCTTTGGAATGGTATAG
GTCGTAGAgcttgtgaaattgaaactaaaTACTACCACTCATTTGAGAAC
TGTGTCAATATGTGTTGTGATTATGGATACGTAAATATTCCAGAACTCAA
AGAAGTCTGCGTCGGCGAGAACAGTAAAAGGGAGTGTCAAGTGCAGACca
ttaataaatatttttgcaaataTGCACATGAGGCTGTACGGTCGTTTCAA
GATATACCATGGCATGATTTTCGCTGA Coding sequence (CDS) from alignment at sc0000251_pilon:285595..287971+ >XLOC_041826 ID=XLOC_041826|Name=XLOC_041826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000251_pilon:285595..287971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGTTAACCAAATCGAGGAGTCAATCAATGCTACTTTTAATTCTATT
ATCATTGAGATTTGAAGAATCTTACCAATTACCGACGCTGTCAGAGGATT
TGAAGTTCTGCAAAGCACAACCAAATTTTAGCCAAGAACAAATGGAGTTT
TGTTACCAGAATACTAACTTGGTAAAGAATTTGATAGAAGGATATCAGTT
AGGACATCAGCTTTGCCAGGAAGCTTTCCAGAACGGTGCTGGTGGTACAC
GGTGGAATTGTACAAATAAAATTGCTAAGaacaacaaaaatgttttgttt
ggtGTTGCTCATCCAAGAGATGATGTTAACCAAATCGAGGAGTCAATCAA
TGCTACTTTTAATTCTATTATCATTGAGATTTGAAGAATCTTACCAATTA
CCGACGCTGTCAGAGGATTTGAAGTTCTGCAAAGCACAACCAAATTTTAG
CCAAGAACAAATGGAGTTTTGTTACCAGAATACTAACTTGGTAAAGAATT
TGATAGAAGGATATCAGTTAGGACATCAGCTTTGCCAGGAAGCTTTCCAG
AACGGTGCTGGTGGTACACGGTGGAATTGTACAAATAAAATTGCTAAGaa
caacaaaaatgttttgtttggtGTTGCTCATCCAAGAGAAGGTTCAAAGG
AGCATGCTATCCTCATGTCATTCACATCAGCCGGAATGCTATATAATCTC
ATCAAAGCATGCCAAAGTAACGAATTCTCATCTTGCAAATATACCGACAT
TTACAACTGCCGACGGTCTTTATCGGGAGGCTGTTACCACTTGGACACTC
AAGTTCCCTTACGATTGATAAGAACTTTCTTCTCATcctcaaaattctca
aaatcaaGATATCAAAAATTGCTGAACCAACATAATCGGGAGCTAGGCTT
ACAGAAGGTTCAAAGGAGCATGCTATCCTCATGTCATTCACATCAGCCGG
AATGCTATATAATCTCATCAAAGCATGCCAAAGTAACGAATTCTCATCTT
GCAAATATACCGACATTTACAACTGCCGACGGTCTTTATCGGGAGGCTGT
TACCACTTGGACACTCAAGTTCCCTTACGATTGATAAGAACTTTCTTCTC
ATcctcaaaattctcaaaatcaaGATATCAAAAATTGCTGAACCAACATA
ATCGGGAGCTAGGCTTACAGAAAGTAAAGAGTTTGATTCGTATACGATTC
GGTCGTGAACACTTATCACCACTCAAAGGCGTTATACCATCTTTAAAAGA
TATTTATATTAACCAAAACCAACGTATCAAACGGAAATACACCAAGGAAA
AAATACCTACAAAACTCTTAACACTAAGATCAAAACTGGTATACACATTG
CGAGATGGGCGCTTTAATTATTGTAACCAAAATGAGAATTGGCTTTGGAA
TGGTATAGGTCGTAGAgcttgtgaaattgaaactaaaTACTACCACTCAT
TTGAGAACTGTGTCAATATGTGTTGTGATTATGGATACGTAAATATTCCA
GAACTCAAAGAAGTCTGCGTCGGCGAGAACAGTAAAAGGGAGTGTCAAGT
GCAGACcattaataaatatttttgcaaataTGCACATGAGGCTGTACGGT
CGTTTCAAGATATACCATGGCATGATTTTCGCTGAAAAGTAAAGAGTTTG
ATTCGTATACGATTCGGTCGTGAACACTTATCACCACTCAAAGGCGTTAT
ACCATCTTTAAAAGATATTTATATTAACCAAAACCAACGTATCAAACGGA
AATACACCAAGGAAAAAATACCTACAAAACTCTTAACACTAAGATCAAAA
CTGGTATACACATTGCGAGATGGGCGCTTTAATTATTGTAACCAAAATGA
GAATTGGCTTTGGAATGGTATAGGTCGTAGAgcttgtgaaattgaaacta
aaTACTACCACTCATTTGAGAACTGTGTCAATATGTGTTGTGATTATGGA
TACGTAAATATTCCAGAACTCAAAGAAGTCTGCGTCGGCGAGAACAGTAA
AAGGGAGTGTCAAGTGCAGACcattaataaatatttttgcaaataTGCAC
ATGAGGCTGTACGGTCGTTTCAAGATATACCATGGCATGATTTTCGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:285595..287971 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 586-1050:1913 |
| Aaloc | 322-585:1250 |
| Aaloc | 1-318:1 |
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