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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:266649..270164+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041824 ID=XLOC_041824|Name=XLOC_041824|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3516bp|location=Sequence derived from alignment at sc0000251_pilon:266649..270164+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAGCTCTGTTAAGAAGACACtccaattttaccaaatttgGGTGTAG
AACTATCAGAAGGTTTCGTGTGTTGGATGGAAATCTGTCCTTGGATCAAA
GTGAAAGAGATAGACTAGCGGATGAAGCACAAAAGTCAGAAGAGTTGTAT
CAAGAGAAATTGGCTCAAATTATGGCAGGTAAGTTGAAGCATTTTCAGAT
CTAATTATCCCcataatctttttttgaaattgttcttgATAATCTGGTGT
AATACTTGCTTTCTGTATTATATCAGATTGCAACGTTTTAGTCTAATATT
CGTTTTGACAGCAAGGCAACTACTTCTTCACTCCCAAAAGTACCCATAAT
TTCGGAGTGACGATGaaattgtgatttatttttGCATGTTAAGAGCCAAC
GTATTACttttgtttcaccctcaaacacttttcgtttcgtttattttttc
tttaagaattatttttgttaatGTAATATTTCATACTGTAAGTTTACAAA
AATCAACTTACACGATGATATATTTAATTCGATTTAATTCCAACTTTGTT
AAGCTGGCTTtatattagaaaaaataagcaaaTACCTGTTTGCAATAAAT
TCAGATGATGTTTTTCTCTCATCATCGCgcagaaatatgaaaaatggaTC
TTTCGTTTCGATTCCCAAGGTTGTCTTGAAGTTcaataatttgcaaaaaa
aaaattcgggGTGAACCAATGATTGTCCAGTGGACACCCAGTTTTGCCAC
TAAGTATAATTTTCCTCTCTCTTTTTTCAGGAAGTAGTGCATCAGCTGTA
GCCCGTCATACACAGAAAAATAAGAAACTGCTAGCTCGAGATCGGATTAA
ACTACTTGTAGACCAGGACTACCCTGTTTTGGAGCTAAGTGCTCTGGCTG
GATTGGACATGGAGTATGGGGACGTTTTGAGTGCTGGTATTGTGGGTTGT
ATAGCAAAAGTCAGTGGCCAGCTATGCGTCATCAATGCTAATGATGCTAC
TGTCAAAGGTACttttttttAACTAAAAGCATAACTAATATATTACACTA
ATATATTACACCATATTCATCAAGTATTTTAGATTCTCATAAGTAATCGA
TGTTAGAAACTTTTTGATTAGGGAAGGTATATTTATATGCCCAAGATAAA
TTTTAGCATGTGAACATGTTCACACACTTACACTTAATTAATTTGATAAC
TTCTTGGAACctcacaaaaaaatcagaacTTTCTTAGAAGAAACACGCCA
ATTAAATATACTGATTATTTTCTTATTCGTACACTAACATTACAGGTGGA
ACAATTTATCCCATCTCGTTGAAGAAACAACTTCGTTTACAAGAGATTTG
CGAACAGAACAATCTTCCTGCTGTTTATCTCATCGATTCGGGTGGTGCTT
TCTTGCCGTTACAATCAGAAATTTTTGTTGAAGGTGGACGCTCTTTTTAT
AATGAAGCAATCATGAACTCCAAAGGAATTCCACAGGTATTGTTGCCCCT
TTATTTATGAAACTTTTTATACAGGGGCATAAAGTTAGTACGTTATTAGA
GCCCATAGTATAAAGGGTAGAGTATCCGGCTACGATGCACAAGGTAAAGG
TCAATCCTGGTCGGCTCATACCAAagacttgatgcctctctgtttGATGC
TCTGCAACAGAATTTATCAAGCTAGTTTAGTCATCGTGTCTGTGCGACCT
GAAcgaggggtctgatccccccttcttaaatgaccccccccccttcttgg
catccccccaacctttaaaaatgcctatcccccaagggttttgggctaaa
ttttctatggtaaaaagggaagggaaacagtaaagaaaattaagtctggc
aaatataataccactttttagtgaaaataaagaacttcctttcatgcaga
ccaaatttcataacagtgctggaaaataatctacaatatatataagcccc
cccttcttaaacgatccccccctccttaatgaaaatttctgacccccccc
ccttcttcacttttttggaaggtgtcacccctccttaagaaagggggggt
gTCCAAACTATGTACGGTCTGTCTCTGAGACCACGCTCTGTTCTAAAGGG
GTATAgcgaatgtgacgatctgacctggttgttcagccaaaacattcaaa
actgcgtagctttttgcttgaaaacgaaagcgaaggCGGGTGGGTTCTAA
TCTTTATGTTTATGATTGGCTTTGATTAtggtgcgattgttttgcttCAG
CCATTCTTcgcgctcaaaagctcattcaATATTCAACCCAAAtgtggatg
aaaaagatcaaagcggtgCGCCAACCTGGGTAGATTTTCTTACGGAGCCA
TGTCCTCTAAAGTGAATACGTGTCATGCGCGGAgaatcagaatctgctcg
gagattaccACATTAGCATAAATATGTTCAGCAAATATTTTTATCCAGTA
AAATTCTTGCAAATTCATTTTGTGGTTTGATAGAAGACTGataatttttc
attcttttcagTTATGTATGGTTGCCGGTTCGTGCACAGCTGGAGCGGCT
TACATCCCTACAATGGCTAACGAAGTCGTCATGGTTGACAAAATAGGAAC
TATTTTCTTGGCTGGTCCTCCACTAGTGCACGCGGCTATCGGCCAACAAA
TCACAGAAGAAGCATTGGGTGGAGCCACGGTGCACTGTGAGGTTTCTGGA
TGTGCTGATTATAAAGCTAAAGATGAAATTGATGCTATAGATACGATGAA
AGATGTTTTATCGACTTTGAACTTACCAGAGTTCTTGCCGAAGTTGTCAT
TCGTTGAGGACCCGTTCTTTAATGAAGAGGATCTGTCTATTTTGTCCGTA
AAGCGTGACGcggacggaaaattagacacaAAGAAGATTGTAGCACGCAT
TGTTGATGGAAGTCGTTTTCACGAATATAAACCAACTTATGGGCGTGAAA
TCATATGTGGATTTGCGCGACTGGGGAGTATGCTTGTTGGTGTGGTCGCA
AATGATGGGCGTTTCACGCCTCAATCTTGTTTGAAAGCTTCCAATTTTGT
TTGTCTGTGTGATGAAAGAGGAATCCCTCTTGTGTTCCTTCAAGACATCT
TGAAAGTCGAAAATGCGGAAACCGCGATAGAACTTATTAAGTATCAAGCT
GAATTAATGTCGTACGTAGCTACAACTCAAGTTCCAAAGATTACTATTAT
AATGGGAAACAGTTTTGGAGTTGGCAACTATGCTATGTGTGGTCGTAGCA
TGAGTCCACGATTCTTGTTTTCATGGCCGACGGCCCGAGTTAGTATACAT
AGCGTTGATGACATGAAACAGACTATAAATAATGATGAAAAGCACTTGCA
GAGGCTAGAACGTGAAGTCACTTCTGTTTATGGTTCGTCACGTATTTGGG
ATGATGGAATTGTTTTACCAAAAGATACACGGCAGGCTTTGATTCAATCT
TTGACAGCTAGTATGATGCATAAGGAGACTAAGAAGTCTTCGAATAAAAA
TGTGGTCAGACTTTAA Coding sequence (CDS) from alignment at sc0000251_pilon:266649..270164+ >XLOC_041824 ID=XLOC_041824|Name=XLOC_041824|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3318bp|location=Sequence derived from alignment at sc0000251_pilon:266649..270164+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAGCTCTGTTAAGAAGACACtccaattttaccaaatttgGGTGTAG
AACTATCAGAAGGTTTCGTGTGTTGGATGGAAATCTGTCCTTGGATCAAA
GTGAAAGAGATAGACTAGCGGATGAAGCACAAAAGTCAGAAGAGTTGTAT
CAAGAGAAATTGGCTCAAATTATGGCAGGTAAGTTGAAATGTTAGCTCTG
TTAAGAAGACACtccaattttaccaaatttgGGTGTAGAACTATCAGAAG
GTTTCGTGTGTTGGATGGAAATCTGTCCTTGGATCAAAGTGAAAGAGATA
GACTAGCGGATGAAGCACAAAAGTCAGAAGAGTTGTATCAAGAGAAATTG
GCTCAAATTATGGCAGGTAAGTTGAAACACCCAGTTTTGCCACTAAGTAT
AATTTTCCTCTCTCTTTTTTCAGGAAGTAGTGCATCAGCTGTAGCCCGTC
ATACACAGAAAAATAAGAAACTGCTAGCTCGAGATCGGATTAAACTACTT
GTAGACCAGGACTACCCTGTTTTGGAGCTAAGTGCTCTGGCTGGATTGGA
CATGGAGTATGGGGACGTTTTGAGTGCTGGTATTGTGGGTTGTATAGCAA
AAGTCAGTGGCCAGCTATGCGTCATCAATGCTAATGATGCTACTGTCAAA
GACACCCAGTTTTGCCACTAAGTATAATTTTCCTCTCTCTTTTTTCAGGA
AGTAGTGCATCAGCTGTAGCCCGTCATACACAGAAAAATAAGAAACTGCT
AGCTCGAGATCGGATTAAACTACTTGTAGACCAGGACTACCCTGTTTTGG
AGCTAAGTGCTCTGGCTGGATTGGACATGGAGTATGGGGACGTTTTGAGT
GCTGGTATTGTGGGTTGTATAGCAAAAGTCAGTGGCCAGCTATGCGTCAT
CAATGCTAATGATGCTACTGTCAAAGGTGGAACAATTTATCCCATCTCGT
TGAAGAAACAACTTCGTTTACAAGAGATTTGCGAACAGAACAATCTTCCT
GCTGTTTATCTCATCGATTCGGGTGGTGCTTTCTTGCCGTTACAATCAGA
AATTTTTGTTGAAGGTGGACGCTCTTTTTATAATGAAGCAATCATGAACT
CCAAAGGAATTCCACAGGTGGAACAATTTATCCCATCTCGTTGAAGAAAC
AACTTCGTTTACAAGAGATTTGCGAACAGAACAATCTTCCTGCTGTTTAT
CTCATCGATTCGGGTGGTGCTTTCTTGCCGTTACAATCAGAAATTTTTGT
TGAAGGTGGACGCTCTTTTTATAATGAAGCAATCATGAACTCCAAAGGAA
TTCCACAGTTATGTATGGTTGCCGGTTCGTGCACAGCTGGAGCGGCTTAC
ATCCCTACAATGGCTAACGAAGTCGTCATGGTTGACAAAATAGGAACTAT
TTTCTTGGCTGGTCCTCCACTAGTGCACGCGGCTATCGGCCAACAAATCA
CAGAAGAAGCATTGGGTGGAGCCACGGTGCACTGTGAGGTTTCTGGATGT
GCTGATTATAAAGCTAAAGATGAAATTGATGCTATAGATACGATGAAAGA
TGTTTTATCGACTTTGAACTTACCAGAGTTCTTGCCGAAGTTGTCATTCG
TTGAGGACCCGTTCTTTAATGAAGAGGATCTGTCTATTTTGTCCGTAAAG
CGTGACGcggacggaaaattagacacaAAGAAGATTGTAGCACGCATTGT
TGATGGAAGTCGTTTTCACGAATATAAACCAACTTATGGGCGTGAAATCA
TATGTGGATTTGCGCGACTGGGGAGTATGCTTGTTGGTGTGGTCGCAAAT
GATGGGCGTTTCACGCCTCAATCTTGTTTGAAAGCTTCCAATTTTGTTTG
TCTGTGTGATGAAAGAGGAATCCCTCTTGTGTTCCTTCAAGACATCTTGA
AAGTCGAAAATGCGGAAACCGCGATAGAACTTATTAAGTATCAAGCTGAA
TTAATGTCGTACGTAGCTACAACTCAAGTTCCAAAGATTACTATTATAAT
GGGAAACAGTTTTGGAGTTGGCAACTATGCTATGTGTGGTCGTAGCATGA
GTCCACGATTCTTGTTTTCATGGCCGACGGCCCGAGTTAGTATACATAGC
GTTGATGACATGAAACAGACTATAAATAATGATGAAAAGCACTTGCAGAG
GCTAGAACGTGAAGTCACTTCTGTTTATGGTTCGTCACGTATTTGGGATG
ATGGAATTGTTTTACCAAAAGATACACGGCAGGCTTTGATTCAATCTTTG
ACAGCTAGTATGATGCATAAGGAGACTAAGAAGTCTTCGAATAAAAATGT
GGTCAGACTTTAATTATGTATGGTTGCCGGTTCGTGCACAGCTGGAGCGG
CTTACATCCCTACAATGGCTAACGAAGTCGTCATGGTTGACAAAATAGGA
ACTATTTTCTTGGCTGGTCCTCCACTAGTGCACGCGGCTATCGGCCAACA
AATCACAGAAGAAGCATTGGGTGGAGCCACGGTGCACTGTGAGGTTTCTG
GATGTGCTGATTATAAAGCTAAAGATGAAATTGATGCTATAGATACGATG
AAAGATGTTTTATCGACTTTGAACTTACCAGAGTTCTTGCCGAAGTTGTC
ATTCGTTGAGGACCCGTTCTTTAATGAAGAGGATCTGTCTATTTTGTCCG
TAAAGCGTGACGcggacggaaaattagacacaAAGAAGATTGTAGCACGC
ATTGTTGATGGAAGTCGTTTTCACGAATATAAACCAACTTATGGGCGTGA
AATCATATGTGGATTTGCGCGACTGGGGAGTATGCTTGTTGGTGTGGTCG
CAAATGATGGGCGTTTCACGCCTCAATCTTGTTTGAAAGCTTCCAATTTT
GTTTGTCTGTGTGATGAAAGAGGAATCCCTCTTGTGTTCCTTCAAGACAT
CTTGAAAGTCGAAAATGCGGAAACCGCGATAGAACTTATTAAGTATCAAG
CTGAATTAATGTCGTACGTAGCTACAACTCAAGTTCCAAAGATTACTATT
ATAATGGGAAACAGTTTTGGAGTTGGCAACTATGCTATGTGTGGTCGTAG
CATGAGTCCACGATTCTTGTTTTCATGGCCGACGGCCCGAGTTAGTATAC
ATAGCGTTGATGACATGAAACAGACTATAAATAATGATGAAAAGCACTTG
CAGAGGCTAGAACGTGAAGTCACTTCTGTTTATGGTTCGTCACGTATTTG
GGATGATGGAATTGTTTTACCAAAAGATACACGGCAGGCTTTGATTCAAT
CTTTGACAGCTAGTATGATGCATAAGGAGACTAAGAAGTCTTCGAATAAA
AATGTGGTCAGACTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:266649..270164 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-1659:2512 |
| Aaloc | 466-654:1298 |
| Aaloc | 190-462:735 |
| Aaloc | 1-186:1 |
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