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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000437_pilon:94473..96526- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041562 ID=XLOC_041562|Name=XLOC_041562|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2054bp|location=Sequence derived from alignment at sc0000437_pilon:94473..96526- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACAAAATCTTTTCGACAGGTTTCCATTGACGAAAATAATGAAGA
GCTTTTTCAAGGCCCAGGATGGAAACATCTCAAAACATCAGTGGAAAACT
TACGTCAAAATTTCACGGTTCTGTGCGACTCCCTAGAAGTCATTTTCAAT
CTTGAAAACACAAAACTGATAGCAACCGGACGAGTGGAGATTCCGGACAC
TTCGAGACGCATATTGGGTAAAGAAAAACAATTTGTTGAGAAATTTCGTG
AAAAGTTGGATGCTGTGAAGTGTGTGGTCATTGAGGCGGGCGATAATGCG
CCTGAATACGCAAGTCTGTACATGTCACTGAATGAGCACGTTCAAAATGC
TATCAAAACTTTGTGCACGGAAGTGAAAGCCCAACTCACAATAAAAAGCA
AATCAACCGAAGAAATTTTGGCTGAAAATCAAAAAATGATGTTGGATTTA
CAGAAGAAAGATAAAGAATTGATGGAGGAGTTGAAACGAAATGAGACAGT
CCTTGTGGAAAAGAGAACACTGACTGCCCGATGTAAAGTTCTGGAACAAC
AAATTGACGAGAAGAATACGCGAATACAACAGTAAGTCATCTTCAGTCAT
CGGTTTTTCTCTTCTCAAAAAGTGTCTTTATAATCGGAGCCACTTATAGC
GTTCTAAAGTTACTCCACGCCATGGAGCCACTCTTTTTTTAGAAACTTTG
ATTAACGCAATTTTAACATTTTTGATTTGTCTTCTCTAGAAAGCTGAAGA
ATAAATACTATCCTATAAAGCCAATGCAACCTGTTGGCTTGTCTTTTCTG
ACAGTTTTGTAAAATTCATTAACTTATTAAGTAAAATGAGCCAAGTTCCT
AAACCAAGAAGGTGGAGTGCTATTTTTCCTTTTTCTATTCTCCCACCGTC
TTCAGAATTTAATGAACTTTGTTGTCTTTCTTTACAGATTACAGAAGGAG
AGCACAGTCGTTTTGTGGAAACGAGAGAAACAAAAGCTGATAGGAACCAT
ACATTCACGTGAGAAAGATATAGAAAAACAACTCGAGTCGACATCCAGCG
AAGCCGATAACACGAAATATCGACTTGAGAAACGAATCGAGGAATTACAA
AATAAACTTCGCAAAGAACACGTAAGGAACACTACAAAATCAACTATTCC
AGCATCTGAGGGGCTCGTACTACGTCGAAATCTATTCCTCAAGGAACGGC
TTTACGTGGTAGCAGAAAGCGAGTTGAAAAAGCAGCAACAGTACTACGCG
AATCTGTTCAAAGGGTTGAAGCGAGACCATGAAATTGCAAAAGCAGCACA
CATGGAGTTATTCGCCGAAGGCAATAACGCCATAGAGACAGCCATTTTAG
AAGAACCTAAATCGGCAAAAACGTTTTCAGACAGACTTAATCGAATCGTG
AAAGCCATTTTTGCGGGAAAGGTCACTGAGTTGAGATCGTCATTACCTGC
CCACTACTTGGGCTACGAACTAAACAAGGGGAACAAAGAAAAACCTAAAC
CAACAGCCGAAAAGAAGAATAAAACAGATTTTATAGTCAAGTTGTCGCCT
GAGGAGGAGGCCAACTTGGATCGGACCGATCTTGGAAGCAGCCTCATCAA
ATGGCGATTAAGCGAAACTGAGAACGTTCCAACACTTGGAAAACTGCTAA
GAGACATCCAAAAAGAGCACCCAACCTTCATAGACGAGAAAGGAAAATTG
AAAATTAAAGAAGTGTCCAATTATTTCCCTACAATCTCACAAGAGAAAAT
CACGCATTATTTTAGCCTGTTTTCCATGTGGGATGACAACGGTGATTTTA
GCCTGGACACCACAGAGATTCTACACAATCTACCAGGAATCTTGGGGTAT
TTGTCGACAACGGAAGAGGTAGCAGATGCAGTTCGAGAGATCGATATCGA
TGAATCAGGGACTATTGATTTTTACGAGTTTCTGTTATTGATTAAACTCT
TACAAGACGGCGAAGGAAAATCGTCCTTCTTCCAGAAAAATGATTTCCTA
AAAGTATCCAGTCAGTTGTCGGACTCGAACTCAAAAATATGCGCGATACA
ATGA Coding sequence (CDS) from alignment at sc0000437_pilon:94473..96526- >XLOC_041562 ID=XLOC_041562|Name=XLOC_041562|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3396bp|location=Sequence derived from alignment at sc0000437_pilon:94473..96526- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACAAAATCTTTTCGACAGGTTTCCATTGACGAAAATAATGAAGA
GCTTTTTCAAGGCCCAGGATGGAAACATCTCAAAACATCAGTGGAAAACT
TACGTCAAAATTTCACGGTTCTGTGCGACTCCCTAGAAGTCATTTTCAAT
CTTGAAAACACAAAACTGATAGCAACCGGACGAGTGGAGATTCCGGACAC
TTCGAGACGCATATTGGGTAAAGAAAAACAATTTGTTGAGAAATTTCGTG
AAAAGTTGGATGCTGTGAAGTGTGTGGTCATTGAGGCGGGCGATAATGCG
CCTGAATACGCAAGTCTGTACATGTCACTGAATGAGCACGTTCAAAATGC
TATCAAAACTTTGTGCACGGAAGTGAAAGCCCAACTCACAATAAAAAGCA
AATCAACCGAAGAAATTTTGGCTGAAAATCAAAAAATGATGTTGGATTTA
CAGAAGAAAGATAAAGAATTGATGGAGGAGTTGAAACGAAATGAGACAGT
CCTTGTGGAAAAGAGAACACTGACTGCCCGATGTAAAGTTCTGGAACAAC
AAATTGACGAGAAGAATACGCGAATACAACAATGACGACAAAATCTTTTC
GACAGGTTTCCATTGACGAAAATAATGAAGAGCTTTTTCAAGGCCCAGGA
TGGAAACATCTCAAAACATCAGTGGAAAACTTACGTCAAAATTTCACGGT
TCTGTGCGACTCCCTAGAAGTCATTTTCAATCTTGAAAACACAAAACTGA
TAGCAACCGGACGAGTGGAGATTCCGGACACTTCGAGACGCATATTGGGT
AAAGAAAAACAATTTGTTGAGAAATTTCGTGAAAAGTTGGATGCTGTGAA
GTGTGTGGTCATTGAGGCGGGCGATAATGCGCCTGAATACGCAAGTCTGT
ACATGTCACTGAATGAGCACGTTCAAAATGCTATCAAAACTTTGTGCACG
GAAGTGAAAGCCCAACTCACAATAAAAAGCAAATCAACCGAAGAAATTTT
GGCTGAAAATCAAAAAATGATGTTGGATTTACAGAAGAAAGATAAAGAAT
TGATGGAGGAGTTGAAACGAAATGAGACAGTCCTTGTGGAAAAGAGAACA
CTGACTGCCCGATGTAAAGTTCTGGAACAACAAATTGACGAGAAGAATAC
GCGAATACAACAATTACAGAAGGAGAGCACAGTCGTTTTGTGGAAACGAG
AGAAACAAAAGCTGATAGGAACCATACATTCACGTGAGAAAGATATAGAA
AAACAACTCGAGTCGACATCCAGCGAAGCCGATAACACGAAATATCGACT
TGAGAAACGAATCGAGGAATTACAAAATAAACTTCGCAAAGAACACGTAA
GGAACACTACAAAATCAACTATTCCAGCATCTGAGGGGCTCGTACTACGT
CGAAATCTATTCCTCAAGGAACGGCTTTACGTGGTAGCAGAAAGCGAGTT
GAAAAAGCAGCAACAGTACTACGCGAATCTGTTCAAAGGGTTGAAGCGAG
ACCATGAAATTGCAAAAGCAGCACACATGGAGTTATTCGCCGAAGGCAAT
AACGCCATAGAGACAGCCATTTTAGAAGAACCTAAATCGGCAAAAACGTT
TTCAGACAGACTTAATCGAATCGTGAAAGCCATTTTTGCGGGAAAGGTCA
CTGAGTTGAGATCGTCATTACCTGCCCACTACTTGGGCTACGAACTAAAC
AAGGGGAACAAAGAAAAACCTAAACCAACAGCCGAAAAGAAGAATAAAAC
AGATTTTATAGTCAAGTTGTCGCCTGAGGAGGAGGCCAACTTGGATCGGA
CCGATCTTGGAAGCAGCCTCATCAAATGGCGATTAAGCGAAACTGAGAAC
GTTCCAACACTTGGAAAACTGCTAAGAGACATCCAAAAAGAGCACCCAAC
CTTCATAGACGAGAAAGGAAAATTGAAAATTAAAGAAGTGTCCAATTATT
TCCCTACAATCTCACAAGAGAAAATCACGCATTATTTTAGCCTGTTTTCC
ATGTGGGATGACAACGGTGATTTTAGCCTGGACACCACAGAGATTCTACA
CAATCTACCAGGAATCTTGGGGTATTTGTCGACAACGGAAGAGGTAGCAG
ATGCAGTTCGAGAGATCGATATCGATGAATCAGGGACTATTGATTTTTAC
GAGTTTCTGTTATTGATTAAACTCTTACAAGACGGCGAAGGAAAATCGTC
CTTCTTCCAGAAAAATGATTTCCTAAAAGTATCCAGTCAGTTGTCGGACT
CGAACTCAAAAATATGCGCGATACAATGAATTACAGAAGGAGAGCACAGT
CGTTTTGTGGAAACGAGAGAAACAAAAGCTGATAGGAACCATACATTCAC
GTGAGAAAGATATAGAAAAACAACTCGAGTCGACATCCAGCGAAGCCGAT
AACACGAAATATCGACTTGAGAAACGAATCGAGGAATTACAAAATAAACT
TCGCAAAGAACACGTAAGGAACACTACAAAATCAACTATTCCAGCATCTG
AGGGGCTCGTACTACGTCGAAATCTATTCCTCAAGGAACGGCTTTACGTG
GTAGCAGAAAGCGAGTTGAAAAAGCAGCAACAGTACTACGCGAATCTGTT
CAAAGGGTTGAAGCGAGACCATGAAATTGCAAAAGCAGCACACATGGAGT
TATTCGCCGAAGGCAATAACGCCATAGAGACAGCCATTTTAGAAGAACCT
AAATCGGCAAAAACGTTTTCAGACAGACTTAATCGAATCGTGAAAGCCAT
TTTTGCGGGAAAGGTCACTGAGTTGAGATCGTCATTACCTGCCCACTACT
TGGGCTACGAACTAAACAAGGGGAACAAAGAAAAACCTAAACCAACAGCC
GAAAAGAAGAATAAAACAGATTTTATAGTCAAGTTGTCGCCTGAGGAGGA
GGCCAACTTGGATCGGACCGATCTTGGAAGCAGCCTCATCAAATGGCGAT
TAAGCGAAACTGAGAACGTTCCAACACTTGGAAAACTGCTAAGAGACATC
CAAAAAGAGCACCCAACCTTCATAGACGAGAAAGGAAAATTGAAAATTAA
AGAAGTGTCCAATTATTTCCCTACAATCTCACAAGAGAAAATCACGCATT
ATTTTAGCCTGTTTTCCATGTGGGATGACAACGGTGATTTTAGCCTGGAC
ACCACAGAGATTCTACACAATCTACCAGGAATCTTGGGGTATTTGTCGAC
AACGGAAGAGGTAGCAGATGCAGTTCGAGAGATCGATATCGATGAATCAG
GGACTATTGATTTTTACGAGTTTCTGTTATTGATTAAACTCTTACAAGAC
GGCGAAGGAAAATCGTCCTTCTTCCAGAAAAATGATTTCCTAAAAGTATC
CAGTCAGTTGTCGGACTCGAACTCAAAAATATGCGCGATACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000437_pilon | genome | sc0000437_pilon:94473..96526 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-1698:1117 |
| Aaloc | 1-579:2055 |
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