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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:245220..249514- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041314 ID=XLOC_041314|Name=XLOC_041314|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4295bp|location=Sequence derived from alignment at sc0000043_pilon:245220..249514- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGGATCGCACAGGTCTGTCAGCCATAGAAGTGTATCAAAGGCGGG
ATCACATAGGTCTGTCAGCCGTACGGACGCATCAAAAGCGGAGAGATCAC
ATTCAAGATCTCATAGGTCTGTCAGCCGTAGAAGTTCGCGCTCAATATCT
CACAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAGGTCACATTC
AAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTCACA
GGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCAAGA
TCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGGTCAAA
TTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTC
ACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAAGTCGTATTCA
AGATCGCATAGGTCGGTCAGCCGTACAGACGCGTCAAGAGCTGAGAGATC
ACATTCAAGATCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGG
AGAGGTCGCATTCAAGATCGCATAGGTCTGTCAGCCGTACGGACGCGTCA
AGAGCGGAGAGATCACATTCAAGATCGCATAGGTCTGTCAGCCGTACGGA
CGCGTCAAAAGCGGAGAGGTCAAATTCAAGATCTCATAGGTCTGTCAGCC
GTACGGACGCGTCAAGAGCGGAGAGATCACATTCAAGATCGCATAGGTCT
GTCAGCCGTACAGACGCATCAAAAGCGGAGAAGTCACATTCAAGATCTCA
CAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGATCGCGCTCAA
GATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAAGTCA
CATTCAAGATCTCATAGTTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATC
TCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGATAGGTCACACT
CAAAATCTCACAGGTCCGGTAGCCATAGAAGATCGAACTCGAAAACTCAT
AAATCAGCAAGTCACAGAAGTCCATCGCACCATGATTCAAGCAAGTCCGT
ATCTGAAAGATCGTTAAGTATTTCTACGGAGAAAGCAACAAAAGAACTTC
CAAAAACAATGAGTGATGATTTCACCAGAAAGAACCGAGCGATGAGCCTA
AAACCACTCGGAGATGCTGTCGTTTATACGGCAACGACCAGTCCGGCACC
TACGGGTTTCCATCGCGGTAGAAGGAGACAAAACAGTCAACTGAAATCTA
TTTCAGAAGAATTTTCATTGTATGGAGGCTCTTATTCGAAAGCTGGCCAA
TCGAGCAAAAGCTATAGAAGGAAAGGTGGTAAATCAAGAAAAGATTCGCA
ACGACCAGGCAGTTCTATTGATTGGTCAAAGAGAAGCGGCAATAAGAGAT
CAAAATCGGCCGACTCGAGAAGGAGACGTGTAGATTCATGTCAATCCATT
CAAATGTCGTATTTATTTGCGGACATCGGGAAAAAAAGTCGACGATCGAA
ATCGGAAAGTCACGTGGGGCGATCACATTTTTCCACACACCAATCATCGC
ATAGCAACCAAGATTGTTCGGACTGGTGCGAATCAGCATCCTACCTAGCA
CTTCCCACCATCAAGGTGGAAAACTCTGACCAATCAGTAGATAACAATGA
CAAGAAATTAAGTAGATCAGTGCATCGAGGGAAGTCTGACCGCAAAAAGT
CGAAAAGCCGTGGCCGCTCGCGAGGACGTTTGCGTTCACGAAAATCAAGT
TATTCGAAGGGAGAGTTAAGCGCTCATTTGTTGAGTCCAGGACGAAAGCC
TTCTAAATCATCCAAGAGATCAGGCTCAAAGACGAAAGTGTCAAGATCCG
CTTCATCGTTTGACATGATGTCAAATAAATCTTTATCACGATCTCGCCAT
TCAAGCAGACAGATGGGATTGAAGTCTAAACAATCCAGTCGAAGATCGAG
GTCTGTGCGTAGTCGGGGTAGATCATATTCGCGATCTCGCCATTCCAGTC
GAAGAACGAGCTCTGTACGTGGTCGTAGTAGATCTTATTCGCGATCTGGC
CATTCCAGCAGAAGAGCGAGCTCTGTGCGTGGACGCAGTAGATCTTATTC
GCGATCTGGCCATTCCAGTAGAAGAGCGAGCTCTGTGCGTAGTAGCAGTA
GATCGTTTTCGCGATCTGACTTTTCTAGTCGAGGATCAAGGTCTGTGCAT
AGGCGCAGTAGATCATTTTCGCGATCTGACCGTTCCAGTCGAGGATCGAG
GTCTGTGCATAGGCGCAGTAGATCATTTTCGCGATCTGGTCATTCTAGTC
GAAGATCGAGGTCTTTTCACTCGAGCGCAAGCTGTTATTCGAGGTCCAGT
TATTCGGGCGCAAGTTCGTACTCAAGGTCCGGTCAATGGAGCGGAACATC
TTATTCCAGATCCGGTGATTCACGTTATTATAGTTCAAGATCCGGCACCA
GTCGAGAAAGATCACGCAAAAATTCCAGACGAAAATCAGATTCGCATACG
TCTACTGAATCGACTGAAGTTTTAATTTCAAGATGCGATGGAAATTCATT
CTTTAAGACTTTTGAAGCTATTCAAGAACCAGCTTCTGTGGTCCATTTGG
ATGTGAGATCTGGAACATCAAGACGATCGAGATCAGCAAGTCGAGAGATA
TCAATTGAATCGAAGAAGGATTCGTCATCTGGCGACTGGTCGGACGGTGT
AAAACATGGCTCAAAATCCGATCGTTCAAAATCCGATTTAGATGGAGACG
CTTCCGATATCCCGATTTCAAAAGGTTCTCACAAATCACACTTATCAGCG
AGAAGATCTTCTCGGAGAAGTAAGAGCAACATGTCATTATCTGTTGAACC
AAAGAAAACGGATTCAAAGGAGACCGTGAATGAAAACCAAAAGGAAACCG
ATGAAGAATTCTCGTAAGTCGTCTTCTCTTTTTCACTTCATTTATTATTA
TGTCAAGTACCGTAAGTTGGTCTAATGTCGACATCCCTCTTCTTCTAATT
TCGACACCCTTCTTTAGAGATGGGAATAATAGGTTGGGATCACTTATAGA
CAAAAGATTTTTTCTTCTCTGTTTGCTAAGTAAAGAAAAACAGTTTCCAT
CAGCGATTCCAACATTCTGATTATTCCTATATTTAGAGAAGGGTGTCGAA
ATTAGAAGGGGATATCGATATTAGACATACTTACGGTAAAAAGTATAGTA
AACAGATATTCTATCAATTAAAAGTTCGATGGTTGAAAAATGCCTTAACA
TAGCTTTGCTACCATTTTGTGTGTTATATTTAAACAATAAGCTAAAGTGT
TTATCGAAGTTAAGTGTTAGTTCGACCTTTAGAAGCCCCAGTATTTGTAA
CCACAGTTGACGCTCCCTAATTCGATTTTCGAGAGGAGTTGAATTTTCAA
AATTATCGAATAATGGAGCGTATCGTCGAATTGGAGAATGTCAACTGTAT
ATTATTCCGCTCATTATACTCTGCCTTCTTTGTGACTTCCTAAATCAAGA
CCCATCATGTACATAAAAGAGAGTGTTAGGTGTAGACTACCAGCATGGAA
GACTTTATCTCGTTTTAATCTTAATATTCGATTTGTTTTTCTTTTTCCAG
CTCTGATGACGATCGAGTTCGTACTGATGATCAATATTCAGACAGCGAGT
TCCCGCTCGACGATCCATCAACAATGAGAATTGATAAGCGTACAGGTAAA
CTTCATTTATTCAATTCCCACATTCTTTTCCTAAGCGGTGAAATCTTTTT
TGATAAAAGCCTCATCGTCATAATGCTTAGAATCTAGTGAATTAAATTCG
AAGCAGCCTTTGCAGCAACCATTAATTCAATGACGATCATTCACTCAGAT
ATGACAAAAACTTAAGCATATGCTAAGCATTACCTCGAGCCTTCATTTTC
AGAGACCAGGCGTTTTTGGTTGTGTTTTTACGTACATTCAAAATTTCCCT
AAAATTTTGCTTGGGAAAAAAGCATTCTTCAAGCATTTTCAGCCTTCAGA
TTTAAGCGTCTCCAAGCCAGTTTTTGAATTTTTTGCATGCTTATAAAAAA
ACATGTAAATCAACAACTGTTGCTAATTAATCAAAACATCTACTTCCAGG
AAAAGTCAAGAAACGAAAGAAGACCTTGGTCAAAAAGAAGTCCAAGAAAA
GCGACAGACAGATTGAATTACCGCCCTTGAGAGGCGGATTAACACCATCA
GGAAACTCTGGTTTGAATGTCGGTGCACTCCCGTCAATCACAATG Coding sequence (CDS) from alignment at sc0000043_pilon:245220..249514- >XLOC_041314 ID=XLOC_041314|Name=XLOC_041314|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6066bp|location=Sequence derived from alignment at sc0000043_pilon:245220..249514- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGGATCGCACAGGTCTGTCAGCCATAGAAGTGTATCAAAGGCGGG
ATCACATAGGTCTGTCAGCCGTACGGACGCATCAAAAGCGGAGAGATCAC
ATTCAAGATCTCATAGGTCTGTCAGCCGTAGAAGTTCGCGCTCAATATCT
CACAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAGGTCACATTC
AAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTCACA
GGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCAAGA
TCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGGTCAAA
TTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTC
ACAGATGTCAGGATCGCACAGGTCTGTCAGCCATAGAAGTGTATCAAAGG
CGGGATCACATAGGTCTGTCAGCCGTACGGACGCATCAAAAGCGGAGAGA
TCACATTCAAGATCTCATAGGTCTGTCAGCCGTAGAAGTTCGCGCTCAAT
ATCTCACAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAGGTCAC
ATTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCT
CACAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTC
AAGATCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGGT
CAAATTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGA
TCTCACAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACA
TTCAAGATCGCATAGGTCTGTCAGCCGTACGGACGCGTCAAAAGCGGAGA
GGTCAAATTCAAGATCTCATAGGTCTGTCAGCCGTACGGACGCGTCAAGA
GCGGAGAGATCACATTCAAGATCGCATAGGTCTGTCAGCCGTACAGACGC
ATCAAAAGCGGAGAAGTCACATTCAAGATCTCACAGGTCTGTCAGCCGTA
CAGACGCGTCAAAAGCGGAGAGATCGCGCTCAAGATCTCACAGGTCTGTC
AGCCGTACAGACGCGTCAAAAGCGGAGAAGTCACATTCAAGATCTCATAG
TTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTCACAGGTCTGTCAGCC
GTACAGACGCGTCAAAAGCGGATAGGTCACACTCAAAATCTCACAGGTCC
GGTAGCCATAGAAGATCGAACTCGAAAACTCATAAATCAGCAAGTCACAG
AAGTCCATCGCACCATGATTCAAGCAAGTCCGTATCTGAAAGATCGTTAA
GTATTTCTACGGAGAAAGCAACAAAAGAACTTCCAAAAACAATGAGTGAT
GATTTCACCAGAAAGAACCGAGCGATGAGCCTAAAACCACTCGGAGATGC
TGTCGTTTATACGGCAACGACCAGTCCGGCACCTACGGGTTTCCATCGCG
GTAGAAGGAGACAAAACAGTCAACTGAAATCTATTTCAGAAGAATTTTCA
TTGTATGGAGGCTCTTATTCGAAAGCTGGCCAATCGAGCAAAAGCTATAG
AAGGAAAGGTGGTAAATCAAGAAAAGATTCGCAACGACCAGGCAGTTCTA
TTGATTGGTCAAAGAGAAGCGGCAATAAGAGATCAAAATCGGCCGACTCG
AGAAGGAGACGTGTAGATTCATGTCAATCCATTCAAATGTCGTATTTATT
TGCGGACATCGGGAAAAAAAGTCGACGATCGAAATCGGAAAGTCACGTGG
GGCGATCACATTTTTCCACACACCAATCATCGCATAGCAACCAAGATTGT
TCGGACTGGTGCGAATCAGCATCCTACCTAGCACTTCCCACCATCAAGGT
GGAAAACTCTGACCAATCAGTAGATAACAATGACAAGAAATTAAGTAGAT
CAGTGCATCGAGGGAAGTCTGACCGCAAAAAGTCGAAAAGCCGTGGCCGC
TCGCGAGGACGTTTGCGTTCACGAAAATCAAGTTATTCGAAGGGAGAGTT
AAGCGCTCATTTGTTGAGTCCAGGACGAAAGCCTTCTAAATCATCCAAGA
GATCAGGCTCAAAGACGAAAGTGTCAAGATCCGCTTCATCGTTTGACATG
ATGTCAAATAAATCTTTATCACGATCTCGCCATTCAAGCAGACAGATGGG
ATTGAAGTCTAAACAATCCAGTCGAAGATCGAGGTCTGTGCGTAGTCGGG
GTAGATCATATTCGCGATCTCGCCATTCCAGTCGAAGAACGAGCTCTGTA
CGTGGTCGTAGTAGATCTTATTCGCGATCTGGCCATTCCAGCAGAAGAGC
GAGCTCTGTGCGTGGACGCAGTAGATCTTATTCGCGATCTGGCCATTCCA
GTAGAAGAGCGAGCTCTGTGCGTAGTAGCAGTAGATCGTTTTCGCGATCT
GACTTTTCTAGTCGAGGATCAAGGTCTGTGCATAGGCGCAGTAGATCATT
TTCGCGATCTGACCGTTCCAGTCGAGGATCGAGGTCTGTGCATAGGCGCA
GTAGATCATTTTCGCGATCTGGTCATTCTAGTCGAAGATCGAGGTCTTTT
CACTCGAGCGCAAGCTGTTATTCGAGGTCCAGTTATTCGGGCGCAAGTTC
GTACTCAAGGTCCGGTCAATGGAGCGGAACATCTTATTCCAGATCCGGTG
ATTCACGTTATTATAGTTCAAGATCCGGCACCAGTCGAGAAAGATCACGC
AAAAATTCCAGACGAAAATCAGATTCGCATACGTCTACTGAATCGACTGA
AGTTTTAATTTCAAGATGCGATGGAAATTCATTCTTTAAGACTTTTGAAG
CTATTCAAGAACCAGCTTCTGTGGTCCATTTGGATGTGAGATCTGGAACA
TCAAGACGATCGAGATCAGCAAGTCGAGAGATATCAATTGAATCGAAGAA
GGATTCGTCATCTGGCGACTGGTCGGACGGTGTAAAACATGGCTCAAAAT
CCGATCGTTCAAAATCCGATTTAGATGGAGACGCTTCCGATATCCCGATT
TCAAAAGGTTCTCACAAATCACACTTATCAGCGAGAAGATCTTCTCGGAG
AAGTAAGAGCAACATGTCATTATCTGTTGAACCAAAGAAAACGGATTCAA
AGGAGACCGTGAATGAAAACCAAAAGGAAACCGATGAAGAATTCTCGTCT
GTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCAAGATCGCA
TAGGTCTGTCAGCCGTACGGACGCGTCAAAAGCGGAGAGGTCAAATTCAA
GATCTCATAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCA
CATTCAAGATCGCATAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGA
GAAGTCACATTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAA
AAGCGGAGAGATCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTACAGAC
GCGTCAAAAGCGGAGAAGTCACATTCAAGATCTCATAGTTCGGTTAGCCG
TAGAAGTTCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGT
CAAAAGCGGATAGGTCACACTCAAAATCTCACAGGTCCGGTAGCCATAGA
AGATCGAACTCGAAAACTCATAAATCAGCAAGTCACAGAAGTCCATCGCA
CCATGATTCAAGCAAGTCCGTATCTGAAAGATCGTTAAGTATTTCTACGG
AGAAAGCAACAAAAGAACTTCCAAAAACAATGAGTGATGATTTCACCAGA
AAGAACCGAGCGATGAGCCTAAAACCACTCGGAGATGCTGTCGTTTATAC
GGCAACGACCAGTCCGGCACCTACGGGTTTCCATCGCGGTAGAAGGAGAC
AAAACAGTCAACTGAAATCTATTTCAGAAGAATTTTCATTGTATGGAGGC
TCTTATTCGAAAGCTGGCCAATCGAGCAAAAGCTATAGAAGGAAAGGTGG
TAAATCAAGAAAAGATTCGCAACGACCAGGCAGTTCTATTGATTGGTCAA
AGAGAAGCGGCAATAAGAGATCAAAATCGGCCGACTCGAGAAGGAGACGT
GTAGATTCATGTCAATCCATTCAAATGTCGTATTTATTTGCGGACATCGG
GAAAAAAAGTCGACGATCGAAATCGGAAAGTCACGTGGGGCGATCACATT
TTTCCACACACCAATCATCGCATAGCAACCAAGATTGTTCGGACTGGTGC
GAATCAGCATCCTACCTAGCACTTCCCACCATCAAGGTGGAAAACTCTGA
CCAATCAGTAGATAACAATGACAAGAAATTAAGTAGATCAGTGCATCGAG
GGAAGTCTGACCGCAAAAAGTCGAAAAGCCGTGGCCGCTCGCGAGGACGT
TTGCGTTCACGAAAATCAAGTTATTCGAAGGGAGAGTTAAGCGCTCATTT
GTTGAGTCCAGGACGAAAGCCTTCTAAATCATCCAAGAGATCAGGCTCAA
AGACGAAAGTGTCAAGATCCGCTTCATCGTTTGACATGATGTCAAATAAA
TCTTTATCACGATCTCGCCATTCAAGCAGACAGATGGGATTGAAGTCTAA
ACAATCCAGTCGAAGATCGAGGTCTGTGCGTAGTCGGGGTAGATCATATT
CGCGATCTCGCCATTCCAGTCGAAGAACGAGCTCTGTACGTGGTCGTAGT
AGATCTTATTCGCGATCTGGCCATTCCAGCAGAAGAGCGAGCTCTGTGCG
TGGACGCAGTAGATCTTATTCGCGATCTGGCCATTCCAGTAGAAGAGCGA
GCTCTGTGCGTAGTAGCAGTAGATCGTTTTCGCGATCTGACTTTTCTAGT
CGAGGATCAAGGTCTGTGCATAGGCGCAGTAGATCATTTTCGCGATCTGA
CCGTTCCAGTCGAGGATCGAGGTCTGTGCATAGGCGCAGTAGATCATTTT
CGCGATCTGGTCATTCTAGTCGAAGATCGAGGTCTTTTCACTCGAGCGCA
AGCTGTTATTCGAGGTCCAGTTATTCGGGCGCAAGTTCGTACTCAAGGTC
CGGTCAATGGAGCGGAACATCTTATTCCAGATCCGGTGATTCACGTTATT
ATAGTTCAAGATCCGGCACCAGTCGAGAAAGATCACGCAAAAATTCCAGA
CGAAAATCAGATTCGCATACGTCTACTGAATCGACTGAAGTTTTAATTTC
AAGATGCGATGGAAATTCATTCTTTAAGACTTTTGAAGCTATTCAAGAAC
CAGCTTCTGTGGTCCATTTGGATGTGAGATCTGGAACATCAAGACGATCG
AGATCAGCAAGTCGAGAGATATCAATTGAATCGAAGAAGGATTCGTCATC
TGGCGACTGGTCGGACGGTGTAAAACATGGCTCAAAATCCGATCGTTCAA
AATCCGATTTAGATGGAGACGCTTCCGATATCCCGATTTCAAAAGGTTCT
CACAAATCACACTTATCAGCGAGAAGATCTTCTCGGAGAAGTAAGAGCAA
CATGTCATTATCTGTTGAACCAAAGAAAACGGATTCAAAGGAGACCGTGA
ATGAAAACCAAAAGGAAACCGATGAAGAATTCTCCTCTGATGACGATCGA
GTTCGTACTGATGATCAATATTCAGACAGCGAGTTCCCGCTCGACGATCC
ATCAACAATGAGAATTGATAAGCGTACAGCTCTGATGACGATCGAGTTCG
TACTGATGATCAATATTCAGACAGCGAGTTCCCGCTCGACGATCCATCAA
CAATGAGAATTGATAAGCGTACAGGAAAAGTCAAGAAACGAAAGAAGACC
TTGGTCAAAAAGAAGTCCAAGAAAAGCGACAGACAGATTGAATTACCGCC
CTTGAGAGGCGGATTAACACCATCAGGAAACTCTGGTTTGAATGTCGGTG
CACTCCCGTCAATCACAATGGAAAAGTCAAGAAACGAAAGAAGACCTTGG
TCAAAAAGAAGTCCAAGAAAAGCGACAGACAGATTGAATTACCGCCCTTG
AGAGGCGGATTAACACCATCAGGAAACTCTGGTTTGAATGTCGGTGCACT
CCCGTCAATCACAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:245220..249514 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2890-3033:145 |
| Aaloc | 2794-2886:645 |
| Aaloc | 406-2790:3720 |
| Aaloc | 1-402:4296 |
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