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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:135586..138457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041310 ID=XLOC_041310|Name=XLOC_041310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2872bp|location=Sequence derived from alignment at sc0000043_pilon:135586..138457- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACGAAGAGAAGTAACCAAACCACCCATTCCGCCATTGAAATCTAC
ACAGAGATTTGGTAAGATCATTGATGGACGACCCATAAGGTTTCGGTGTG
GATTGCAGAACACTATCTTGGATGTGCTGAAGAATCGAACAGGATGGGTG
GAAGCATCAGTAGATGGGGACTGGGACTTCATATGGAGTGACAGGTACAC
ATTTTTTTACATTAGAGCATGCGAAATTTCTGAAGCATTCAGATGTTCTC
AAATTTTTGAGTTTCAAGCTAAAAAATGTTCTTTAAATGTTTTTATTGTA
CCGTTTTGTGAGTATTCTTGTGCAATGTCCTAAGAAATCGGGTGTTTTAG
AGTTTGTTAAGCCTTAAAAGTTTTTGACCATTGAAACCTTATGTTCTTGT
ATAGTTTGTTCTATCATAAAAAACATTTTGTGCAGATATTAAGGTTTAAG
AAATAAAACAAAAATTCAACTAATTTAAATGTTATTTTCTCCTCTTCTCT
TACCAAGGTGTGGTATTATGGAGATTTACGATAACCAATACCTCGAGGAG
CACGTCAAACTGAATCACTTCAGAAACCATTATGAACTTACTCGTAAAAA
CTTGATGGCTAAGAATCTGAAACGGTTGAAGAAACAAGTGGAACGTGAAC
AAGGTTTGTTTGTTACGATTTTTTGTTTATAATAAAAATAGTGTTTTTCC
ATTTCTTTATCGTTGGTATTATTAATTTGTTGGGGAAAATCATCCTAAAA
TATTCTTAGGTCATGATTCAAAGTCTATCTAAAATCAACATTAATATACA
TACCTCATCCTAAAAAATGGCAGTTTTTATGAAGGTTTTATGTATTACTT
GGGGATAATTGGCCATTTACAGGTAAAAAGGATCCTAAAATGCCAATCAT
AGAATCAGTTACCGAATTCCATGATTGTGATATTCTCAGTATTTTTTGAC
CAATTTTATTTCATGATTATCATAATACTTTTATTTATAAAATAAATACA
TTATAAAATACTTTCTCATGAAAAAAGCGTGTATTTACAGCCACGATCTC
GGCTCCCCCTACTCAGAGCTGTGAAACCTCACTCGAAAGGTTACAAAAAA
TTACATTTAAGGCCTTCTTTAGTCGACTTGAATGCCAGTGAATCTCACCT
TGAAGCAATTAATCTACTTGTCTCTTGGGATTTTATAAGAGGCTCTTCAC
TTTGGGAATTTTGAAGAGACAGAATTCTTCTTTGGAGTTTTTCTTTTACC
TTGTCTAACTGTGCATCATCTTTGTAAGGCCTTTTAGTCGACTCGAATGA
AAGTAAATTTCACCTTGAAGCAATTGGTCTTTTTATCTCTTGGGAATTTT
GAAGAGGCTCTTCACTTTGGATTTGTGTTTTAACTGTGTATCTTTTTGAA
ACTCTACCTTGTCTAATTGTGCATCATCTTTGTAAGGCCTTTTAGTCGAC
TCGAATGAAAGTAAATTTCACCTTGAAGCAATTGGTCTTTTTTATCTCTT
GGGAATTTTGAAGAGGCTCTTCACTTTGGATTTGTGTTTTAACTGTGTAT
CTTTTTGAAACTCTACCTTGTCTAACTGTGCATCATCTTTGTAAGGACTT
TTAGTCGACTCGAATGAAAGTAAATTTCACCTTGAAGCAATTGGTCTTTT
TATCTCTTGGGAATTTTGAAGAGGCTCTTCACTTTGGATTTGTGTTTTAA
CTGTGTATCTTTTTGAAACTCTACCTTGTCTAACTGTGCATCATCTTTGT
AAGGCCTTTTAGTCGACTCGAATGAAAGTTAATTCCACCTTTAAACAATT
GGTCTTTTTTATCTCTTGGGAATTTTGAAGAGGCTCTTCACTTTGGATTT
GTGTTTTAACTGTGTATCTTTTTTCAAACTCTACAGGAAAGCTTGAAGCA
GCCAAACTGGACTTCTTTCCACAAACATTCGAGTTACCAAGCGAATACCA
CATGTTTGTGGAAGAATTCAAAAAGTATCCTGGCAAATTATGGATCATGA
AACCAATAGCCAAATCACAAGGTAAGGGCATCTTCTTGTTCAAAAAATTG
AAAGACATTATGGATTGGAAGAAAGAAGACTATTACCGAAGCATTGATGA
GAAAAGAGAAGATAAGGAGATCCCAGAAGCTTACATTGTCCAAAGGTACA
TTGATAACCCTTATTTAGTCGGTGGACGTAAATTTGATCTTCGTGTTTAC
GTCTTGGTCAGCTCTTACATCCCACTGAAAGCATGGTTGTATCGCGATGG
ATTCGCCAGGTTTACCAACGTTAGATACACCTTGAACTCCATCGATGATC
AATACATCCATTTGACTAATGTGGCCATCCAAAAGCAAGCCCCTGATTAT
GACCCTGATGGTTTGAAATGGACTTTACAACAATTGAGAATGTATTTGAC
TGCCAAATATGGTGTAGGTGTTGTGCAAGAACTGTTCAGACTTATGGATG
AGATTTTTATTAAAAGTTTACAAAGCGTACAACGTGTCATGATTAATGAT
AAACATTGTTTTGAACTTTATGGTTACGATATCTTGATTGATGAGGAATT
GAAACCTTGGTTATGCGAAATCAACGCATCTCCATCATTGACGGCTAGCA
ATCAACTGGATTATGAAATGAAGCATGCATTATTAACGGACGTATTGAAT
GTTTTGGATATTGAAGGTAGGATGACAGGTCATGAGAAAAGAGTTGGTGG
TTTTGATTTGATGTGGAATGACGGTCCGGTCATGGCTGATGATTTTTGTA
TTAACGAGTTATCGGGTACTGGCGCTTTCACGTCGAACACGTTCTTGGGA
TGTTGTAACGATCGGGTGCCGCAATTGAAACAAATGTATAAAATGGCTGC
ACAAACGAAAAGTGCTAACTGA Coding sequence (CDS) from alignment at sc0000043_pilon:135586..138457- >XLOC_041310 ID=XLOC_041310|Name=XLOC_041310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2652bp|location=Sequence derived from alignment at sc0000043_pilon:135586..138457- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACGAAGAGAAGTAACCAAACCACCCATTCCGCCATTGAAATCTAC
ACAGAGATTTGGTAAGATCATTGATGGACGACCCATAAGGTTTCGGTGTG
GATTGCAGAACACTATCTTGGATGTGCTGAAGAATCGAACAGGATGGGTG
GAAGCATCAGTAGATGGGGACTGGGACTTCATATGGAGTGACAGATGGCA
CGAAGAGAAGTAACCAAACCACCCATTCCGCCATTGAAATCTACACAGAG
ATTTGGTAAGATCATTGATGGACGACCCATAAGGTTTCGGTGTGGATTGC
AGAACACTATCTTGGATGTGCTGAAGAATCGAACAGGATGGGTGGAAGCA
TCAGTAGATGGGGACTGGGACTTCATATGGAGTGACAGGTGTGGTATTAT
GGAGATTTACGATAACCAATACCTCGAGGAGCACGTCAAACTGAATCACT
TCAGAAACCATTATGAACTTACTCGTAAAAACTTGATGGCTAAGAATCTG
AAACGGTTGAAGAAACAAGTGGAACGTGAACAAGGTGTGGTATTATGGAG
ATTTACGATAACCAATACCTCGAGGAGCACGTCAAACTGAATCACTTCAG
AAACCATTATGAACTTACTCGTAAAAACTTGATGGCTAAGAATCTGAAAC
GGTTGAAGAAACAAGTGGAACGTGAACAAGGAAAGCTTGAAGCAGCCAAA
CTGGACTTCTTTCCACAAACATTCGAGTTACCAAGCGAATACCACATGTT
TGTGGAAGAATTCAAAAAGTATCCTGGCAAATTATGGATCATGAAACCAA
TAGCCAAATCACAAGGTAAGGGCATCTTCTTGTTCAAAAAATTGAAAGAC
ATTATGGATTGGAAGAAAGAAGACTATTACCGAAGCATTGATGAGAAAAG
AGAAGATAAGGAGATCCCAGAAGCTTACATTGTCCAAAGGTACATTGATA
ACCCTTATTTAGTCGGTGGACGTAAATTTGATCTTCGTGTTTACGTCTTG
GTCAGCTCTTACATCCCACTGAAAGCATGGTTGTATCGCGATGGATTCGC
CAGGTTTACCAACGTTAGATACACCTTGAACTCCATCGATGATCAATACA
TCCATTTGACTAATGTGGCCATCCAAAAGCAAGCCCCTGATTATGACCCT
GATGGTTTGAAATGGACTTTACAACAATTGAGAATGTATTTGACTGCCAA
ATATGGTGTAGGTGTTGTGCAAGAACTGTTCAGACTTATGGATGAGATTT
TTATTAAAAGTTTACAAAGCGTACAACGTGTCATGATTAATGATAAACAT
TGTTTTGAACTTTATGGTTACGATATCTTGATTGATGAGGAATTGAAACC
TTGGTTATGCGAAATCAACGCATCTCCATCATTGACGGCTAGCAATCAAC
TGGATTATGAAATGAAGCATGCATTATTAACGGACGTATTGAATGTTTTG
GATATTGAAGGTAGGATGACAGGTCATGAGAAAAGAGTTGGTGGTTTTGA
TTTGATGTGGAATGACGGTCCGGTCATGGCTGATGATTTTTGTATTAACG
AGTTATCGGGTACTGGCGCTTTCACGTCGAACACGTTCTTGGGATGTTGT
AACGATCGGGTGCCGCAATTGAAACAAATGTATAAAATGGCTGCACAAAC
GAAAAGTGCTAACTGAGAAAGCTTGAAGCAGCCAAACTGGACTTCTTTCC
ACAAACATTCGAGTTACCAAGCGAATACCACATGTTTGTGGAAGAATTCA
AAAAGTATCCTGGCAAATTATGGATCATGAAACCAATAGCCAAATCACAA
GGTAAGGGCATCTTCTTGTTCAAAAAATTGAAAGACATTATGGATTGGAA
GAAAGAAGACTATTACCGAAGCATTGATGAGAAAAGAGAAGATAAGGAGA
TCCCAGAAGCTTACATTGTCCAAAGGTACATTGATAACCCTTATTTAGTC
GGTGGACGTAAATTTGATCTTCGTGTTTACGTCTTGGTCAGCTCTTACAT
CCCACTGAAAGCATGGTTGTATCGCGATGGATTCGCCAGGTTTACCAACG
TTAGATACACCTTGAACTCCATCGATGATCAATACATCCATTTGACTAAT
GTGGCCATCCAAAAGCAAGCCCCTGATTATGACCCTGATGGTTTGAAATG
GACTTTACAACAATTGAGAATGTATTTGACTGCCAAATATGGTGTAGGTG
TTGTGCAAGAACTGTTCAGACTTATGGATGAGATTTTTATTAAAAGTTTA
CAAAGCGTACAACGTGTCATGATTAATGATAAACATTGTTTTGAACTTTA
TGGTTACGATATCTTGATTGATGAGGAATTGAAACCTTGGTTATGCGAAA
TCAACGCATCTCCATCATTGACGGCTAGCAATCAACTGGATTATGAAATG
AAGCATGCATTATTAACGGACGTATTGAATGTTTTGGATATTGAAGGTAG
GATGACAGGTCATGAGAAAAGAGTTGGTGGTTTTGATTTGATGTGGAATG
ACGGTCCGGTCATGGCTGATGATTTTTGTATTAACGAGTTATCGGGTACT
GGCGCTTTCACGTCGAACACGTTCTTGGGATGTTGTAACGATCGGGTGCC
GCAATTGAAACAAATGTATAAAATGGCTGCACAAACGAAAAGTGCTAACT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:135586..138457 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 343-1326:985 |
| Aaloc | 196-339:2365 |
| Aaloc | 1-192:2873 |
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