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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:79301..86569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041308 ID=XLOC_041308|Name=XLOC_041308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7269bp|location=Sequence derived from alignment at sc0000043_pilon:79301..86569- (Clytia hemisphaerica_ch_hm2_pilon)
AATGACGCAGACACTTTACAAAAAGCAAGTCAAGATATTAGTTTCTTCAC
TTGGAAACCTTTCAATGCAACACAAGTTTTGATTGTGTACTGGCGCCAAC
TGAGGTCTGATTTTAATGAAAAGACATTGAAATTCCAAGGTGTTTTGGCT
AGTGACAGTGAAGAGACATATTTAATACATTTAAATGAAAAATACCTTGG
AGAAAAAGTTGTACAGTCAGGTGTATCAGCTAAAAGATGCTTTTGGAATT
GGTTTGGTGGGAAAGAATGGGTGGGTGGTATGCGCTCTAACACTGGTTAT
AATGGACAAAATATTTATAAAGTTTCCAACAAGAAATGTTTCAATGATTG
TAAGTTTTTTGAATTCTCTATTTACTCTCTATTTGTGACCTTAAGAGCAC
CAAAGCCTCATTAAATCAATTTCCCTAGATGACAAATGCAGTATATACAA
TGTACCTTAAGTGGATTAATTTTCGCGTGGACTTTTTTTCGCAAATTGAA
TATCCAAAATTTTTGCGTGGACAAAATTTTGCGAATCGAACTCTTTTTCA
ACCGATTTCTTTCACTTTCCTAGGGGTTTCGGCCAAAATTCGGATTTTAA
ATATCGCGAAAATTAATCCACTTAAGGTACATTATCAATAACAAGTATAA
ATGTTACCGAAGTCTATGTACTTTAAATGTGTGCTAATGCCAATGCTCCA
AGTCCATTAAATATTATACCCTTGAAAAGGTGTACTTTCAAAAATGTTTG
AAAATGAAGGTAAAAGATATAAAATAAGGAAAAACATATTGATTTTATCC
TTTGATGCTAGTAACTACATTCTTGGTATTGAGGCTAAGATATCGTGGCT
GACAAAAAGGAGATTACCTGATACACCCATCAACGCACCAAAGGGATTTG
GTCGAGTTTTCCAGGAATGCATGGGGAAAACATTTGGAATTATGTCATGG
TTTCTCGGAAAATCAACGCAGAGGCATTTGTCGCCAATCCTGCCTAGTAT
AATGATCCAGCATTTTCTTCCCGCGATTGCTACAACACTTAATCTCAACA
CTTTTTCTTTTTCTTTTAGATTTGGTTCCATTTGGTGAAGGAATAGATAC
AGGAGATATGGGAGAAGCAGACGAAGTGATAAAAAATTTCGACCTGACCC
AGAAATTCCCTTTCTTCTCTTACGAGGATATGTACATAAAGGTGAAGGGC
AATAAATTTCACTAGCCTTACTTTCATATAATCGAACCAGAAAAAAACTC
AGTCGTGATTTTCCCATGAAACTTTATATATTTTCATCCCTGTTGATATC
AGGGATATGTTATAGCGGAGCTGGATAACGCACATTTAAAAAAGAAATTA
AAATTTGATATGAAATTTAACTTTTTTAATTACAAACTCGTGAAATTTGG
ATTTCCTCTTAGCCAATGATTCTGCTGCTGCATTTATCGTTCACGATTAA
AAACTTTTAATTATCAAGAGGGTCTGTAAAACATTGGTGAATGACAATTT
AAAAAAATGAAAAACATTGTTTTCATTAGTAAAGTTATAAGAAGCTTCTT
CTCTAAGATTATAAATAGTACTTTTTCATTTGAAATACCGCGCTACACCG
CGGGGTGCCTCACTTTCTAACTGATATTTTCAAATAGCAAGTTGGTATGT
CTGATTATGGAAAAAATTTCAAGTCAATTGATACAATATTTGTCAAAATA
TTTACATCCGAAATTTTTAAAGAGAAATCATGAAAGCTTCCCAAATTCAT
AACACACGCTGATAAAAATAGATATTATTTACAGTATGTGGCCCCCAAAA
CGGCGATCAAATTTGAAATTTCTCTCAAATCTAGAGGAAAAGAGATTTTA
CAAAAATTTTTGCTGCATGAAAACCTTTAACATCTCTACTTTATTTCCTG
GAAGTTCTTTTTCAAAATTTTCAATTTCAACAATATTTTTCAATCGTTTA
AAGATAGGTAGCTTTTTTCTAATGGCCCCCAAAACGGAGGTTTGAAATTT
TAGCGATTTCTCGAGATATCTTTAAGATATGAATACAAAATTTTGACCAT
AGTTTTGAAATATGATTTAGAGGGTTTTGAGCATAAATCTATTTGATAAA
ATTTTTACAGTATACCCCTGGTTGTCAAAATGCAGGTTTGGGGCCCCCAA
AACGGAGGTGTAGTTAAAATCAAATTATTAAGCCCAGTGGTAATAGGGGG
AAAAACTATAAACATATTTGTGTTTTCCCTTAAATTTACGACCTGATGGA
TGTAAAATTTACGATTTTTATGAAATATTTCAAGATTTTCGATATTGCAT
AGTCCAAACTGAAAATTTAGAAATTTTCAAAATGACAATTTTGATTTAAC
ACCGTCTTAATCAATTTTTTGAAAACAAATCTCTTTTGAAAATAGTTCCA
ATCATGTATGGAATAAGCTGTGAAAATTTTAGAAAAAAAGCTTAACTGAA
ACTGAAAATATTAAGCTTTAAAGATATTTTTCTCCTATATTTTGCAAAAA
AATGATTCAGCAAAAAAATTTATATATAATGTTAATTTTTTGTTATAAAC
TATTAACTCAAGGTGATAGGAGAGTAGAATTCCAAGATTTTTTGCTTTTT
CTCATATTAAGAATTTTCGGTTTTGTCAATGCTGATTCTAGGGCTCCAAA
ATACTGGTTGACCTTCAAGATGCTATATCTTTTACCCAGCCTCTAAAGTC
ACAGATGTATTTGCATTTTCTGAACGGCATTAGGTGTAGAAAGTTTTCTA
TACCTCGTTTTCATAACTTATTTTCAATATCCAAGGAGCTAGAGTGATTT
ATATGCAATTTTTATCTAATTTTGGTGTTAAAATATTTCCTTTAGACGCA
AATATGTTATTTTGAATCTGTCTCAAACCAGCAAAAACATGCTCATTTTT
AAGTATAACCATCATTCTTTCAAAATAAACAAAAATCGTTTAACTCTGAT
AAATCTACAAGTCAGAATCTTCATTTCAATGAAAACCTCCATTTTGGGGG
CCGTCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTACA
AGGAAGCTTTTGGGGTATCTTCTACAAATATCATTTTGATGAAAAGCGGG
AACATCATAGCAAAATATGTGCAAACGTACTGTATGAATACTTTGCCTGT
TTCATTTTTCTTATAAAAACAGAACACTTAAGGGGACAGAGATGGATTTC
TATTATGAACAGTTTACAATAGAAAAGACAAAGGAGCAATCCGCTAAGGA
ATTCTCGTCCTTCATCCAGCTCCGCTATAACATATCCCTGTTGATTTAGA
TTTTAAGCAGCTAGTGATAGATCTGGTAGGGAGTTCAAAATTCATGACAG
GAAATTAGTAAGCTTAAACGTCATAAATTTCGAGCCCTCCCCTCAACACC
TGTCACTACACATTAGCAACAATAATTTAAAATTATCGACCGAACAAATC
TTTCAAAGATGGCGTGTATTCTTTTAAAAATGATCTGAATACACTATTTA
ACGTTACACCAACATTGAGTAAGGCTATTTTTATATTACTTGATCCCATT
GAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTAACCTTTCTCAGGCA
AGAAAAATTGAAGCCTTAAAATATGCGCCGTATTTTTGATGACGGATTGA
ATCTAGCAATTCCTTTGTTTTCGAGTGATATATTTTTCGAAATTAAGCGG
TAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAGGCGGGTTGCTC
AAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACCAAGGA
GATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATGCTTGATCCCATTTC
TCACTGCAGGTCAATACCAACAACGCGCTGACTAAGAAAGCAGACATCTA
TAGTTTCTACGGGCCTAATGTCTTCAACAAAATGAGCAGGTCTTTTATAT
CACTCTTTTACAATGACATGTTCACTGAATTTGGAGGTCACATGACATGG
AGGGAAACTAAAACAGAAACCGATTTATCATCCATCAATAATTACATCAA
GAAAAGAAACCCTTCGTTAACCTTCATCCCGAAACATGCAATTGTTCTAA
CTCTTGTGAATGTACAACAGTACGGTGTCAGGTACGTTTTAGAGTCTGCT
AAACCACGTGTCTCACGTGCCCTAGTGCCCTAAAATTTTCACGAGTCCTA
AATTTTTTTAGCGATATGAGGTCTTTCTTATCGGTATTTCGGGATTAAGT
CGATAAGTACTCGGTACAAATTTCTAATTACTAACAATTAGCCGAAATAT
TTGACATCTTCTTATTATTCTGACTATTTCTGTTCGACGACATGGACGAC
CTATGGCACTAGAGACACGTAAAAAAGTTAAGGCACTAGGGCACGTGATT
TAGCAGACTCGTTTTGTAGTCTAACATATCCCACAATTTAGAATCAGGAA
ATTTTATTCGTTAGCATAAAAGCTCGCATTCGATCAATCTATTGACTTTA
TCACAGTCTTACAGGTTAAGCTTGCTAATTAAGCTAAGCTTAATGAGCTC
TTTTATCCATAGGTGAAATCTTATTGGCTCATTGAAGCTTTAAAAATTAG
TTGAGACGAGATTCATTGTTTCTGACATCAGTGTAAGAAAATATTCGGAC
TAAAAATAGGCTTGTAAATTTGACAAATGTGAAATGATAAGATTTTTCGA
TCAATGTTTTCTTTAAGGTGAACTCTATTGCTTGATACTTTCCTCCAAAG
TTCTTCAGTGACTTTATGTCTACAAATTGAGTCTGAAATCATGTGGGCTT
ATAAAGAACCTTTCATTTTCTGGCCTGAGAAAATATCTTTTCAAAACAAA
ATTTAACGGATAACGAAATTGAGCAATCTTGAGTTCTACGAAAGAGTCTT
ATTTCATCGTGCGAGCTTAGAATTTCTTTTGGTACAATTTATAATAGAAA
TCAAAAGACCTTAACGACCAATTACCAACACATTCAACTCCTGTTTTTCT
TTATACATCCATGATTAGATAAACTTTCAAGGGAATTAGAGTCACTTACA
GTCAACTCCCTCTAATTCGAACCTCTATTATTCGAATCTTTCTGTAATTC
AAACTAAAACATTGTCCCTTCAGCTCTAGGGAGTAAATAACTATCTGTAA
TTCGAATCTTTCTCTAGACCGAGAATCTTTGATCCCTTTAAGATCGAATT
AGAGAGTCAACTATAAAAGAACTTCATAATTATCATGATCAAAATGATAA
TTTATTTGGTATTTTACTTTCTTGATTTTCTATTCATGATATGCACCATT
GCAATGTCTTCCGTTCCACCCAGTAGCTCATTGGTTGAAAGTGACGTAAA
ATCAGTCGATACGTCACTTTTAACCAATCAGCTACTGAGTGGAACGGAAG
ACATTGCAATGGTGCATATCATGAATACACGTTTCAGGTCATCACGGAAC
ACAATGCAACAGATTCTAGTTACGGACGGTTCCCTCACCTTTGCCATACT
CAATGTCTATCAAGCGGACTCCGTACATATGTCGGCATCCGGATATTATG
ATGAAAATTGTAAGAAAGCCAAGGTCTTCCATTCACATAGTGAGAAAGAC
TTTGAGGAACACTTAGACGAGATTAATCCTATTGTCGTCAAATTGATCAA
CAAAGATTGCACGTTCCCTGAAGGTAATAAGCAATGCCAGCTCCGTGTGG
ATGAGAAGAAATAGCTATGTGCTTGTGGAAACTAAGTCAAAATCCTTTTC
AAGCCCATATATTTTAACCGTGTACCGTATTACTTCGAATAAATGCCCGG
GCGTTTAATAAACTTTTAGAATTTTAGGAGGGCGTTTATTCGAGAGGGCG
TTTAAAAGAAGTGAGTGTTTATTAAATTCTCAACCAAGACTATCTTAATA
AAGTGAATGGGAAATTTGTTTTGGGTTTTCGTTTTCAGCTAAAATATGTC
ATTTTAGAGATGTAAAAATGGGTCAAAATAAGTTTGAATACTGAAAGGAT
ACAATCATCAACAGATATTTAAGTTTATCCCTTCAAATAGTTCCTCCTTG
CAGCTACCTGTTTCAAATAAACACCCCTTCTAGGGGAGGCGTTTACTCTA
AGGGGGCGTTTATTTGATGGGAGCATTTATTGAAAATTTTTTCTTTATTG
ATGGGTGTTTATTCGAAGGGGCGTTTATTCGAGGTGCGTTTATTCGAAGT
AATACGATAACAAGAAAGTGACACAAATACAAATCTTGAGTAACTTTCTT
TTCATTTCTGGTGAAGGGGTTTGAGTATTTTTACAAGTATGTAAAACCGA
ACGGAAAATATTGTGAGATGAAATTTCTTAGTTGAATTAACACGACACGA
AATCGTGATCAAGTAGTTTTCATTTTTGAATAGCTATGACAGCTAAAATA
TTTTCTTTTTCATTTGAGACGACACAATTGGAGTGTTCATCCCGACAACA
ACGACAACTTCCACAACAACAACTTCCACGACAACCACTACAACTCCGAC
CACAACTACCACAACCACCCAATCACTTTCGCAATCGTCAGACACACAAG
GTTAGTATTTTCTTGACACCTGTGTTATGTAAGAAAATACCCTGAAATAC
TTTAGGCGTACAAACTTTCGCGAGTAGAAACTTTCTCGAGGACGAAAAAT
CGAAATTCAAGACATTTACTTTCGCGAATTTAACGGAAAAATACTTTTCG
CGAAAGGCGTAAAATTAAAAATTTTCACAAGAAAGAATGGCTTAGAGGGA
CAAATACTTCTTGCATTAGCTTGAAACATTTGTCCTTTGACTTATTATTA
GTCTTTTAGCAGGCTAAAAAGTGCCATAAAAGTTACATTTTTTCAAAGTT
TGAAGTTTTACAGATTTTCTATTTTGTCAAGAATTTTTTGCGAGCATAAA
CTTTCGCGAATGGCCCTTCCTAGAATTTTTAAAGACATTTACTTTTCGCG
AAAGTTTGTACGCCTTAGACAGAGCAGTGCTTAAAAATGAAGCCCGAGTT
TACCAAGCCAAACTTCGTCACTTCAACGCTGTTTTTCAGTAACTTTGAAG
TAATTTATGAATTATTAGCCAAATTTAATGTTAAGACTATTTGGCACCGA
AAAGATAAAAAGATCACCGTTAGGAGAGACTATCCCGAGCAAATAATGGA
GATAATTTCGTTTTCATCTTTAAGGTACGGACTACACGGTGATTATTGGA
TCAGGTGTTGGAGGAGGAGTATTCCTCATCCTTATCGTTATCATCGCGTG
TGTGTGCAAAAGAAGGTGA Coding sequence (CDS) from alignment at sc0000043_pilon:79301..86569- >XLOC_041308 ID=XLOC_041308|Name=XLOC_041308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2412bp|location=Sequence derived from alignment at sc0000043_pilon:79301..86569- (Clytia hemisphaerica_ch_hm2_pilon)
AATGACGCAGACACTTTACAAAAAGCAAGTCAAGATATTAGTTTCTTCAC
TTGGAAACCTTTCAATGCAACACAAGTTTTGATTGTGTACTGGCGCCAAC
TGAGGTCTGATTTTAATGAAAAGACATTGAAATTCCAAGGTGTTTTGGCT
AGTGACAGTGAAGAGACATATTTAATACATTTAAATGAAAAATACCTTGG
AGAAAAAGTTGTACAGTCAGGTGTATCAGCTAAAAGATGCTTTTGGAATT
GGTTTGGTGGGAAAGAATGGGTGGGTGGTATGCGCTCTAACACTGGTTAT
AATGGACAAAATATTTATAAAGTTTCCAACAAGAAATGTTTCAATGATTA
ATGACGCAGACACTTTACAAAAAGCAAGTCAAGATATTAGTTTCTTCACT
TGGAAACCTTTCAATGCAACACAAGTTTTGATTGTGTACTGGCGCCAACT
GAGGTCTGATTTTAATGAAAAGACATTGAAATTCCAAGGTGTTTTGGCTA
GTGACAGTGAAGAGACATATTTAATACATTTAAATGAAAAATACCTTGGA
GAAAAAGTTGTACAGTCAGGTGTATCAGCTAAAAGATGCTTTTGGAATTG
GTTTGGTGGGAAAGAATGGGTGGGTGGTATGCGCTCTAACACTGGTTATA
ATGGACAAAATATTTATAAAGTTTCCAACAAGAAATGTTTCAATGATTAT
TTGGTTCCATTTGGTGAAGGAATAGATACAGGAGATATGGGAGAAGCAGA
CGAAGTGATAAAAAATTTCGACCTGACCCAGAAATTCCCTTTCTTCTCTT
ACGAGGATATGTACATAAAGATTTGGTTCCATTTGGTGAAGGAATAGATA
CAGGAGATATGGGAGAAGCAGACGAAGTGATAAAAAATTTCGACCTGACC
CAGAAATTCCCTTTCTTCTCTTACGAGGATATGTACATAAAGGTCAATAC
CAACAACGCGCTGACTAAGAAAGCAGACATCTATAGTTTCTACGGGCCTA
ATGTCTTCAACAAAATGAGCAGGTCTTTTATATCACTCTTTTACAATGAC
ATGTTCACTGAATTTGGAGGTCACATGACATGGAGGGAAACTAAAACAGA
AACCGATTTATCATCCATCAATAATTACATCAAGAAAAGAAACCCTTCGT
TAACCTTCATCCCGAAACATGCAATTGTTCTAACTCTTGTGAATGTACAA
CAGTACGGTGTCAGGTCAATACCAACAACGCGCTGACTAAGAAAGCAGAC
ATCTATAGTTTCTACGGGCCTAATGTCTTCAACAAAATGAGCAGGTCTTT
TATATCACTCTTTTACAATGACATGTTCACTGAATTTGGAGGTCACATGA
CATGGAGGGAAACTAAAACAGAAACCGATTTATCATCCATCAATAATTAC
ATCAAGAAAAGAAACCCTTCGTTAACCTTCATCCCGAAACATGCAATTGT
TCTAACTCTTGTGAATGTACAACAGTACGGTGTCAGGTCATCACGGAACA
CAATGCAACAGATTCTAGTTACGGACGGTTCCCTCACCTTTGCCATACTC
AATGTCTATCAAGCGGACTCCGTACATATGTCGGCATCCGGATATTATGA
TGAAAATTGTAAGAAAGCCAAGGTCTTCCATTCACATAGTGAGAAAGACT
TTGAGGAACACTTAGACGAGATTAATCCTATTGTCGTCAAATTGATCAAC
AAAGATTGCACGTTCCCTGAAGGTCATCACGGAACACAATGCAACAGATT
CTAGTTACGGACGGTTCCCTCACCTTTGCCATACTCAATGTCTATCAAGC
GGACTCCGTACATATGTCGGCATCCGGATATTATGATGAAAATTGTAAGA
AAGCCAAGGTCTTCCATTCACATAGTGAGAAAGACTTTGAGGAACACTTA
GACGAGATTAATCCTATTGTCGTCAAATTGATCAACAAAGATTGCACGTT
CCCTGAAGACGACACAATTGGAGTGTTCATCCCGACAACAACGACAACTT
CCACAACAACAACTTCCACGACAACCACTACAACTCCGACCACAACTACC
ACAACCACCCAATCACTTTCGCAATCGTCAGACACACAAGACGACACAAT
TGGAGTGTTCATCCCGACAACAACGACAACTTCCACAACAACAACTTCCA
CGACAACCACTACAACTCCGACCACAACTACCACAACCACCCAATCACTT
TCGCAATCGTCAGACACACAAGGTACGGACTACACGGTGATTATTGGATC
AGGTGTTGGAGGAGGAGTATTCCTCATCCTTATCGTTATCATCGCGTGTG
TGTGCAAAAGAAGGTGAGTACGGACTACACGGTGATTATTGGATCAGGTG
TTGGAGGAGGAGTATTCCTCATCCTTATCGTTATCATCGCGTGTGTGTGC
AAAAGAAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:79301..86569 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1222-1314:94 |
| Aaloc | 1090-1218:850 |
| Aaloc | 853-1086:1832 |
| Aaloc | 580-849:3411 |
| Aaloc | 460-579:6199 |
| Aaloc | 109-456:7270 |
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