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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:233459..239714+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041291 ID=XLOC_041291|Name=XLOC_041291|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6256bp|location=Sequence derived from alignment at sc0000043_pilon:233459..239714+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGGTGGTAGAGGTAGAGGGCGTGGCGCCCAAGCAGGAGGTGGAGC
AGGGCGTAGAGGCGTTGGTTTGAGAAATGGAATGACAGTATTGAATGtag
cagaaaaaaatgatgcaGCGAAGAGGTTGTCTCAACTTATGTCGAGAGGG
AACTCACAAAGGGTAAGTCTCAAGTTATGTCGAGAGGGTAACATGttctt
ttgattcttcaaactTCTGTAAGTACTGGTGTAGGAAGAATGACATTCAT
GATAGATATCTTTAGGCCGGAGAGCATAAATAATGAATCAAGTTGATGAA
AGGAtgtctattttcaaaaattagacgTTACGATTTTTTCGATCTAATTG
CCTTAAGATTTTAATATCAAACTTTGGCGCCATTGGTAACATCGCTGCTG
ATTTTTAAGAGGATATTTCTGTCACCTTAGAACGTTTGTGTTAAATCAAT
TCTTTGATTGACTTTTAGTCCTTTTTGTAAACTATTAAAATCACCATCCA
AAGCTCTTCCAGGTTTTATCAGCTGCATCATTAAGACgagtttattcatt
tttagagAGAAGGTTTCTCCAAATTCAACaagatttatgaatttgatTAC
AACCTTCTAAACTATGTAAGTAGTCAACGAATATCTGTCAAGTCTGCTGA
CTTTGAGTTACTTTATTTACTCTCTGTTGTACAACAATCTCAAACCCGAT
TACCAGTCGACCTGATTCTTAAAAAATCAACTCTAAATTGCgacattttc
aaatgaaaacatgAGCGAGACTTATCCTTACAACCACTCTTGCATTTCTA
GAAATAGAAAATAGCTTTTTAATCCTTTGTAGAACTTGcacatttttcca
atttcttgcTAATGTATTATACAGTGAGTATGAGCCATGTGCAGCAGTGg
agtctttttaactcgaacctctatagctcgaatgtctccttaattaAAGA
TTCTTTGGTTGTTTGACAAATGCCCCGAATTTCAACCTTGGTGACGGCTA
TATAAATGTGCACTAATTTTAATACGACTCAAGACTCAAAACTCaaaact
cgaacaagttttatggtctcttcagttaacaatgccttataaaccttact
ctctataattctgtGTTCTTTGAACTGCACACTTTTATTTCATAGAATTG
TAAAATGGTTATGACGTCAGTATCAGGTCACTTGATGACAATGGATTTCA
GTTCTGTTTATAGAAACTGGTAAGTTCCATCACTCGATATTACCTTTCCA
ACAATTTCATATACTGTATTGAAATCCGAAAGATTAAAAATCTCATATTG
AGtttttttGTGGAAATATCAACCTATCACTTTTCGCAATTTTAGTTATC
TTTCATTCAATAGTGTCTTGTATGTTCTCTTCAACTCAATGCTCCTTAAA
ACCCTCGTAACCCTTAGTGGTGCGAACGGCTTTTAATGGTTTTGATGAAT
AATATAAtgaactagccggtacccggcgtcgcacgccggtttagctgttt
gctgaacgcatttaaagtcctttgagatgttgggaaggtggcttaaataC
GATGaactcaaaattaaagggatgaattctcttcaaagtttgactctatc
cctcccgggtgacgtatcttttaaccatattttgaaaaagatttttatgg
caaaaaagaacagaaaacagaaagggcgtcattcccaaattacaccatac
cggcgaccggcgacgtccgagacgactctgcaattagattttttttctcg
cttcgctcgcgttatatttgccgtagttcttgatgtttaggaaaactttg
atgtcaagataagcggagtgaaataatagacactagccggtacccggcgt
cgcacgccggtttagctgtttgctgaatgcatttaaagtcctttcgatgt
tgggaaggtggcttaaacaccccttaaacacgatgaaatcaaaattaaag
ggaagaattctcttcaaagtttgactctatccctcccgggtgacgtatct
tttaaccatattttgaaaaatatttttgtggcaaaaatgatcagaaagca
gaaagggcgccattcccaaattacaccataccggcgaccagcgacgtccg
agacggctctgcaattagattttttttctcgcttcgctcgcgttatattt
gccgtatttcttgatgtttaggaaaactttgatgtcaagataagcggagt
gaaataatagacatgacacacgattcgtcgaaaaaaggcagcccgggggg
tgcttaggcaagagaaggaaGGGTATTGGTATATGCCGGCCTTaaaggtg
ccttttttgaaacatggcagtttgaaaaatcggaaaatcaaacttcagtc
ccactaagaatcggaaaatttaactttttgcccccagaaagatagaaatt
tgtgaaattagtcccaaaaagtgaattaaaattcacacaatatCCCTTTT
tctctcctctttattctgctaagggcccgggggggggttacttaggcaaa
atgggtgccggtatgtgcgagccataagggtaccttttctcattcctcaa
aagtctctcaaaggggtacaaattcaaagttagtctctgaaaggtcccaa
aatcacgaaaatcaaagattttctctctcaaaagggtcacgatttctaaa
aattttgaccaaaatttggtgaaaatcaaaccaaaattggaaaaaatgga
ccaaaatttaggaaaaagtctctcaaagggtcccaaaatcaccaaaattt
tgtctctcaaagggtcgattttcgattttcgctcggacatacccgtcacc
tcgcaaacctagtaccccccccccggggctaagggtccaaggggcagggc
cgaaagtcagctcgcaaccatagtccccccggaaggcagcaaTTTTATgg
tgctttttataaaataacttcgtcataacttcgataacttttcaaattca
acaatgacttagatttacagcaaaataattatcgacatagatgtttaaag
gtccctttttacgaagaaagaactctagtttttaccgccttttgaatgta
attttaatgttgctgttgttctaacaaacttgtcttgtgattcttatgtg
tttttatatttgttcttttctttaacagattctgtttaaaagattttctt
ttgttttgaaaagaattcgaatgtctcaaatcaaataggtcgttaattac
attcgaaaatataaaacaaaagaaaagaaataaaaaaaagagaaagtcta
atctatcaatcaaaacaaagtctttataaatagtcgcgcggctgaggtcg
aaaaaagtggctagaaaatgattttcgtgatacacctcttagattccact
tttttcgatggaaactctcgaattagtatatgtagattccaaaatcaaaa
agtttccacgatattatcgtgcaagtaacgagtaaatggcgattttttgc
gtttccaggcaaaattgcaaggcctggaaattcatgatttttggggggtc
ttcaaattaaaaaaagacctatatcacatgatagagctcttcaaactgag
caaaaaagtgtattacaccaaagtcccaacttctctagatcaaaagttat
gggcctattgtggtcaaaaaggtgtttaattttgcataaattaatgcaga
ttgtggggaaattccctgttttccatcagttttttaccacaaataggccc
gtaacttttgatctagagaagttgggactttggtgtaatacatttttttg
ctcagtttgaagagctctatcatgtggtataggtcttttttttaatttga
agacccctcaaaaatcatgaaaaaaaatgaatttccaggccttgcaattt
tgcctggaaacgcaaaaaatcgccaattactcgttacttgcacgataata
tcgtggaaactttttgattttgtaatctacacatactaattcgcgagttt
ccgttgttttttttggaatctaaaatatgtatcacgaaatgaaacgtttt
tcgacctcagccgcgcgactaaaaacggcgcgaatctgatttaacacatt
tgtggagcaagaagcaaaagtcatcttttaaaagaacaaaacattgcttg
cgaaatcgaaagtgacacacagacagaaaacaaaatgacatacgcgttat
actattaatatatagatgacacgcgattcgtcgaaaaaaggcagcccggg
ggggggggtacttaggcaagagaagggaatgggtatgtgccggccttaag
ggtgccttttttgaaacatggcagtttgaaaaatcggaaaatcaaacttc
agtcccactaagaataggaaaaatttttgcccccagaaagatagaaattt
ggtcaaattagttccaaaaagtgaattaaaattcacacaatttcccttgt
ttcttctcctctttattctgctaagggtccgaggggcaggggcAGGggcg
aaagtcagctcgcaaccatagccccccccggaaggcagctaggacacgca
gacaaaaaagcgtgatagatagcgcaattttatgttgctttttataaaat
aacttcgtcataacttcaataaattttcaaattcaacaatgacttagatt
tacagcaaaataattatcgacatacatgtttaaaggtccctttttacgaa
gaaagaattctagttttttaccaccttttgaatgtatttttaatgttgct
gatGTTCTAAAAAACTTGTtatgattcttgtgttttattttatatttgtt
cttttctttaacagattctgtttaaaagatttcttttgttttgaaaagaa
ttcgaatgtctcaaatcaaataaggtcgttaattacattcgaaaacataa
aacaaaagaaagaaagaaaaaaaaagaaaaaagtctaatctatcaatcaa
aacaaagtctttataaaacggcgcgaatatcgttaaacaaatttgtggag
caagaacaaaataaaagtcatcttttggaagaacaaaaacattgcgttag
aaaacgaaagtagaaaacacagacaaacacacatacagactaccactatt
aatatatagatatacACGGAAACGatgtcaaaatctattgtttatGAGAA
AGTCAATTCACGCTTCACGCTTTAATTGTTGATAGGTGTATTTGTGTAAT
GTTCTGCATTACTTTTGTACAGGAAGAATATCGATCCAGCACAATTATTC
CAAGCACCCGTCTCTCGATTCGTGCCCGACAACTTCATTGATATAAAGGT
AAGAAAGCATGCTCTGTTGACAGGTAAGGAAAGTTGAACCCAAAAGGTTG
GTGAGATCTGCTCATAGAATAATGTTGGAGTCGCTGTTGAACGTTGGTAA
ACCAATAAACTAGTGGAATGTTTCGGCAATAATTTTCTTCAGTCTAGGGa
caatattgtttttttctaataaagcaGTGCCAAATAGCATACCGTGGTGA
ATTTAGAAATAggcattgatttttctgtttgaccgaaattcaatcccatc
atcctttgcgTTTATTACGCTTACACACTCAATCACAAAGAAGAAGTTAT
AACTTTCACGATTTTTGAATCAAGACAAAAAGGATTGTGGGGAATCTTCA
TCCTGTCTtataagcaagaaaaagtgaaattctTCAGATTTTCGCCGCAC
TTAGAATGACAGATACAATGAAACGCTTTCTTTCTTCTAATGtggtatat
ttttcaatatctggcgatatattttttactttagagtgtcggaagaaaat
ttctacatggAGTGCCAAATAAACAATATGCTTGTCGGGAGAAGATTTTT
ACATCAAGTGCTAgataaccactgacctttatatatccctggaccaagtt
actcaatcccggccaaccaaaaatctttgattggagttttttttgaaatt
ggtaccctaatggcggcactactcaatagcggtgaaaatgcatcgagagc
gctagatctacttttcctagaatacttttgatgatgtagcgctgttagac
gttaatttttaatattgcaatggcttcttcttgggtaccaattccaaata
aaactccaatcaaagatggtggatatagcttggtccagggatataggTGG
TGTAGGTCGGTGTAGATAACCCAgtattttgctttgtttttcttatagAG
GACGTTAGAGAGAGAGATCCGAAAAAGTCAAGTGTTGGTGATTTGGACTG
ATGGTGACCGAGAAGGAGAAAATATCGGCTTCGAAATCATCGAATGTTGT
CAAAAT Coding sequence (CDS) from alignment at sc0000043_pilon:233459..239714+ >XLOC_041291 ID=XLOC_041291|Name=XLOC_041291|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=960bp|location=Sequence derived from alignment at sc0000043_pilon:233459..239714+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGGTGGTAGAGGTAGAGGGCGTGGCGCCCAAGCAGGAGGTGGAGC
AGGGCGTAGAGGCGTTGGTTTGAGAAATGGAATGACAGTATTGAATGtag
cagaaaaaaatgatgcaGCGAAGAGGTTGTCTCAACTTATGTCGAGAGGG
AACTCACAAAGGATGCCTGGTGGTAGAGGTAGAGGGCGTGGCGCCCAAGC
AGGAGGTGGAGCAGGGCGTAGAGGCGTTGGTTTGAGAAATGGAATGACAG
TATTGAATGtagcagaaaaaaatgatgcaGCGAAGAGGTTGTCTCAACTT
ATGTCGAGAGGGAACTCACAAAGGagAGAAGGTTTCTCCAAATTCAACaa
gatttatgaatttgatTACAACCTTCTAAACTATagAGAAGGTTTCTCCA
AATTCAACaagatttatgaatttgatTACAACCTTCTAAACTATAATTGT
AAAATGGTTATGACGTCAGTATCAGGTCACTTGATGACAATGGATTTCAG
TTCTGTTTATAGAAACTGAATTGTAAAATGGTTATGACGTCAGTATCAGG
TCACTTGATGACAATGGATTTCAGTTCTGTTTATAGAAACTGGAAGAATA
TCGATCCAGCACAATTATTCCAAGCACCCGTCTCTCGATTCGTGCCCGAC
AACTTCATTGATATAAAGGAAGAATATCGATCCAGCACAATTATTCCAAG
CACCCGTCTCTCGATTCGTGCCCGACAACTTCATTGATATAAAGAGGACG
TTAGAGAGAGAGATCCGAAAAAGTCAAGTGTTGGTGATTTGGACTGATGG
TGACCGAGAAGGAGAAAATATCGGCTTCGAAATCATCGAATGTTGTCAAA
ATAGGACGTTAGAGAGAGAGATCCGAAAAAGTCAAGTGTTGGTGATTTGG
ACTGATGGTGACCGAGAAGGAGAAAATATCGGCTTCGAAATCATCGAATG
TTGTCAAAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:233459..239714 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 373-480:6149 |
| Aaloc | 298-372:5174 |
| Aaloc | 223-294:1146 |
| Aaloc | 163-222:556 |
| Aaloc | 1-162:1 |
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