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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000279_pilon:183463..187275+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041145 ID=XLOC_041145|Name=XLOC_041145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3813bp|location=Sequence derived from alignment at sc0000279_pilon:183463..187275+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAACGTTGCAGCTATcagattttttgcctttttctgTGGGCTTCT
TGGTGTGATTTTCCTGATCACTGCACTTCCAACCCATCACTGGTACCATG
CAAGACCTTACGGCTCAAATGAAACAGTCGTTCCAGAATCTCTTCATGTT
AAAACAATTTATGGAGGAATCTTTGAAGATTGTAGAGAAATGTCAGATGG
AAGTTATTCCTGTCACACAACCCATGGAGATGGTAagatttttctttgga
aatatgatttttcattttgggAAATTGCATAAAACAGACTCTCCCggcaa
tcaaacctagttcatcttgtagagcttcaaaaaagaaaaaaaatgagggg
tcatacacctcctaatgataagcggttccggagatattgagattttggtt
ccgctaaaatagcacctttttagacatttgaggttgacattttatcccag
aaatggcatatgaaatggcaccgaaatatacactttttgatggttttcca
atttcaaaatcCAATAACTTTTGACGTGGTTAAGATATAttgacctgaaa
tttggagggtaGTTTCGTCATGTATGGAAAAGggaacttcaaaaaatttg
acattACGCATTATAAGCAATACTTATATGTCAAGAAGctgcataaatta
tgcaaatattaaattaaacattgatatatttttcatcCACACTAGTTTTT
GGCTAACTTTCTGAGTTCAAACTATCAAAAATGATAGAGGGTCAATAATC
ATTtgactttaaagaaaatttgagcCATCTGAAACATTTAGGACATCAGT
AACTAGTTCTCCGTAATTCAAACTATATGTAATCTGCCCTTGTGTTAAAA
ATTGTTTGggtgcgaggggttagggatagggcggtcatcgaaaaaatgct
ctgtttgcaaaatgcatgcgggcggacgggcggtcaaaaacattcacggg
tttttttaatcacgccagtaactcaggggcagGTGGTAACctgagcaaaa
caatttttcgatggttgTCAgggcaattgagaaaaaagctatactttaaa
agaacaaattgcttttcccagattttttctGCATCTctgcaccggaaaat
cagcagaaaatttgatgcgggctgttgatgcgaatagaacaatttttcaa
tgaccgcctagtgggttttcagcttttaacttttgatagcgcGCTTTTCA
AACGCTATGCTCAATCAgggagctgaaagatctttcttacaaaaacaaat
agtaaagtgttttgatagatttccagagacttttatgaaattcagagaat
ctttaaatgatccagcaattgcatttttgaaaaattgaaacatttttata
ttatgtaatgtatgttagttttctcagtcattttcttttttgttctttcC
CGTGTTAGGTGTCGGACCGAttctgggcctactttttaaaaatttgtgtt
tttgatacttgtcttttgtcgtttgtctatttcttgtctctttgaacttg
tttgttttgtttaaccccttttttgtttctttgtatttgtgtgcgagttt
ttgttagtttgtttggactgcgggtcggttcagggttatggaaaTCTGGG
GACGTgttggacgtccttaaaacatgtttaaagccgctgtGCCTGTCTCA
AGTcggggactccagattgcatttgttggatttttgagtggtttttggtg
tttgtttatgtgattgctgttttgtttttctgcttgtctttttaaacttt
atgtctattggtttgttggttctttttcgcataaaattctcatttcttgg
cagaatgtttgattggtttgatttatatatttagaaaaacttATGATTAT
AAAAATAGtagtccctttttatgtttcatctttattttatttagtatttt
caaaaatttctcattagaggtcagatctctgatctccACCATATATATAT
AGaagaacatctaaaatctgAGGGGATTTTGATCAACAGAACTtactaag
aaaaaataaaaaaacttcccCTCATGAAACTGCAGGTAAAAACAGGTTTG
TTTAACCTCCAGAGACAAAACAGTGGAgatcatcaaaataatgcacGTAC
GTCTGTTTTGCAAATTACCAGAAAGGTGTATTGTGATCATCATTTGGGGT
TTTTCATCGATTGGAAAAAAGCTATCAAACATGGAGTGGTAGAGTCTGGA
CAAAATGTCATTTCTGCAAAAATTTTTAGTCTTgtccaaaaagttttttc
actcGCTTTACTGTATAGCtttgtttttcagatttttttaggGAGATTTT
CTGCACAGAGAAAAGCCTGCATTCATAATGAATCATTTCCtgtatattca
tgatatgcaccatagCAATGTCTTCttacattacatcatggacccaatag
ctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttcaacca
atcagctgttgggtctgtggaGGACAttgcaatgggctcttccagaaaaa
atccgttcatgggggtggaggatatattatttttttcatgaattacccct
ggacattttgatttttaaccccctgggcAAACATCAAATccaccccgtgg
acacaaaaaattaccttattggtatatattttcgcgtgttacaaattttc
gcgggtacttaatttcgcaagttttttggtcaattttcgcaaaatttaat
actgtttaaatttttcaaaattacaaaatcgctaaattaaatacacgcga
aaaatcttttcttagtattttgttagtatttttacatcaaaaacgttgtg
tttcaagcaaaatcagtctttttcttgctttacattcccactttctgaaa
atacctagtttagtgaatcgcgaaatttaatacacgcgaaacacgttttt
tcgaaataatttcgctattcgcgaaaatttgtaacacgcgaaaatatata
ccaataaggtacccctggacattggaattttttggtattttttcaatacc
cctggacaattcatcctccaccccccatgaacggattttttctggaagag
cccaatgatgCAAATAATGAATATTTAAAAGCCAAATTTTCACAAATTCA
GCATGGGGTTTCAAAATGTATAATGACAATTCTCTGTCAaatttgaaaag
tcaattttgaCCTTGTAGCCTATAATATTAATGAGAAATTTGCTTTCCTT
ATAGGATATGTCAAAACCACAAAAGCCTTCCTTGCCTTGGGAATTGTTGG
ATATGCTGCAATAACAATCTATACATTATTAACTGCATTGACAAGAAAAT
TATGCTACAAAGTCCTTGGATCTATTACAGTTATTACAGGTAAATTTTTT
ACAAGAAACTAACAGAAATAGTTTTCACAGATATTAGTAATCTTAAGCAT
TCCCCCTTTAAAatgcttataaataatgttTGATTCCCAATAGCTATTTG
AATTATTAAAGGCAATATATAAGGAAGTGGTTTAATTGTTAAGAAAATAT
TGTTTAATGGAAGAATATTTACTTATCTAACGAGAAATGTTACCTCTGAG
ACCTTTTAGATGATAATTACATCCTGAAAAAGTAAAAGACTTTGGTTTGA
ATTTGTACTAATTTTATTAtaatgcaaaatttgaattccttttaagcttt
tttcatcATGGTTGGTATGGCAACATACACAGACCAACATCCAGACAAAG
GTGATAACATGGAATATGGATGGTCTTTCGACCTTGGATGGGTTTCATTT
GTTTTGACTCTCGTAGCAGGAATCTTGGCATTTTTCGGTGACGTAGaata
tgaaaaagtttaa Coding sequence (CDS) from alignment at sc0000279_pilon:183463..187275+ >XLOC_041145 ID=XLOC_041145|Name=XLOC_041145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1068bp|location=Sequence derived from alignment at sc0000279_pilon:183463..187275+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAACGTTGCAGCTATcagattttttgcctttttctgTGGGCTTCT
TGGTGTGATTTTCCTGATCACTGCACTTCCAACCCATCACTGGTACCATG
CAAGACCTTACGGCTCAAATGAAACAGTCGTTCCAGAATCTCTTCATGTT
AAAACAATTTATGGAGGAATCTTTGAAGATTGTAGAGAAATGTCAGATGG
AAGTTATTCCTGTCACACAACCCATGGAGATGATGGCTAACGTTGCAGCT
ATcagattttttgcctttttctgTGGGCTTCTTGGTGTGATTTTCCTGAT
CACTGCACTTCCAACCCATCACTGGTACCATGCAAGACCTTACGGCTCAA
ATGAAACAGTCGTTCCAGAATCTCTTCATGTTAAAACAATTTATGGAGGA
ATCTTTGAAGATTGTAGAGAAATGTCAGATGGAAGTTATTCCTGTCACAC
AACCCATGGAGATGGATATGTCAAAACCACAAAAGCCTTCCTTGCCTTGG
GAATTGTTGGATATGCTGCAATAACAATCTATACATTATTAACTGCATTG
ACAAGAAAATTATGCTACAAAGTCCTTGGATCTATTACAGTTATTACAGG
ATATGTCAAAACCACAAAAGCCTTCCTTGCCTTGGGAATTGTTGGATATG
CTGCAATAACAATCTATACATTATTAACTGCATTGACAAGAAAATTATGC
TACAAAGTCCTTGGATCTATTACAGTTATTACAGcttttttcatcATGGT
TGGTATGGCAACATACACAGACCAACATCCAGACAAAGGTGATAACATGG
AATATGGATGGTCTTTCGACCTTGGATGGGTTTCATTTGTTTTGACTCTC
GTAGCAGGAATCTTGGCATTTTTCGGTGACGTAGaatatgaaaaagttta
acttttttcatcATGGTTGGTATGGCAACATACACAGACCAACATCCAGA
CAAAGGTGATAACATGGAATATGGATGGTCTTTCGACCTTGGATGGGTTT
CATTTGTTTTGACTCTCGTAGCAGGAATCTTGGCATTTTTCGGTGACGTA
Gaatatgaaaaagtttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279_pilon | genome | sc0000279_pilon:183463..187275 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 370-534:3649 |
| Aaloc | 235-366:3207 |
| Aaloc | 1-231:1 |
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