XLOC_041089 (mRNA) -

Overview
NameXLOC_041089
Unique NameXLOC_041089
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:599056..599931-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041089 ID=XLOC_041089|Name=XLOC_041089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=876bp|location=Sequence derived from alignment at sc0000023_pilon:599056..599931- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGAAGGACGGGCGGACATGATGGGAAAATTGGGCGTTTCCAGTGGACT GGGTATGATTGTCGGTTCCGGCATTGGTGGATTCATTACGTCACACTTTG GAAATCGAATTCCATTCTTCGTTGCTATAGTCGTAGACGTTTTATGTATA TTGGTAACTTTAGCCTTGATTCCACGAGACACGACACACATTCGTGAACA TTTAGAGCCTAAACGTAAAAACGAAGAATCGTTAGAGAAAATAAAATGTA AAGAAGAAGAGAAAAAGAAATCCTTCTTAGGAATCGGTGAATTAGTAGCT GTAACGAAACGAAAACATATGATTTACTTACTGACTATCAAAATCATTAC GGCTTTTCCATTCTCTGTTTTATCCGCCATGTTTACACTCCTCCTTATGG ATTATTATAAACTGTCACCGAAGGAGAACGGTATGGTGTTATCCTATCTT GGAGTGGTCGGCATGATCACACAAGGCTACCTGATTGGTTTATTCTGCCG TCACGTGAGCGACGGCCCATTAATTATTATCTCAACTATTACCATGGCTG TTGGATTCTTATATCTCATTATCGCGGAAAGTATATATGTGTTTTGTTTG ACGTGTATACCTTTGACTGTTGGCGGTTCTTTACTACATATCGTGACAAC GTCTATCATAACAAAAGTCGTGAAGAAAGAGGAGACAGGATCCGCCCTGG GCGTGACACTTTGCACCCATTCCAGTATTAGATCGGTGGCGCCCACCATA GGCGGATTTTTATTCCAACACGTGGGATTTTATACGTTTGGTGTGTTAGG GTATGGTGTTAATTTCTTGATTACAATATATTTGTTGTTCTTCGGACGTG ATGATTTCAGTGTTGGTGAACTGTAG

Coding sequence (CDS) from alignment at sc0000023_pilon:599056..599931-

>XLOC_041089 ID=XLOC_041089|Name=XLOC_041089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000023_pilon:599056..599931- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGAAGGACGGGCGGACATGATGGGAAAATTGGGCGTTTCCAGTGGACT
GGGTATGATTGTCGGTTCCGGCATTGGTGGATTCATTACGTCACACTTTG
GAAATCGAATTCCATTCTTCGTTGCTATAGTCGTAGACGTTTTATGTATA
TTGGTAACTTTAGCCTTGATTCCACGAGACACGACACACATTCGTGAACA
TTTAGAGCCCTGAAGGACGGGCGGACATGATGGGAAAATTGGGCGTTTCC
AGTGGACTGGGTATGATTGTCGGTTCCGGCATTGGTGGATTCATTACGTC
ACACTTTGGAAATCGAATTCCATTCTTCGTTGCTATAGTCGTAGACGTTT
TATGTATATTGGTAACTTTAGCCTTGATTCCACGAGACACGACACACATT
CGTGAACATTTAGAGCCTTTGACTGTTGGCGGTTCTTTACTACATATCGT
GACAACGTCTATCATAACAAAAGTCGTGAAGAAAGAGGAGACAGGATCCG
CCCTGGGCGTGACACTTTGCACCCATTCCAGTATTAGATCGGTGGCGCCC
ACCATAGGCGGATTTTTATTCCAACACGTGGGATTTTATACGTTTGGTGT
GTTAGGGTATGGTGTTAATTTCTTGATTACAATATATTTGTTGTTCTTCG
GACGTGATGATTTCAGTGTTGGTGAACTGTAGCTTTGACTGTTGGCGGTT
CTTTACTACATATCGTGACAACGTCTATCATAACAAAAGTCGTGAAGAAA
GAGGAGACAGGATCCGCCCTGGGCGTGACACTTTGCACCCATTCCAGTAT
TAGATCGGTGGCGCCCACCATAGGCGGATTTTTATTCCAACACGTGGGAT
TTTATACGTTTGGTGTGTTAGGGTATGGTGTTAATTTCTTGATTACAATA
TATTTGTTGTTCTTCGGACGTGATGATTTCAGTGTTGGTGAACTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041089XLOC_041089-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:599056..599931 -
Properties
Property NameValue
Aaloc226-489:265
Aaloc16-222:877