XLOC_040981 (mRNA) -

Overview
NameXLOC_040981
Unique NameXLOC_040981
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000016_pilon:2533679..2534584+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040981 ID=XLOC_040981|Name=XLOC_040981|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=906bp|location=Sequence derived from alignment at sc0000016_pilon:2533679..2534584+ (Clytia hemisphaerica_ch_hm2_pilon)
cagccGCCAAAATCCAAGAAGGTCAAGGTTAAGAAGCCTCAAGCTGCCCC TTTCACCACCAAGGGTGCAAAAACCACCAAGAAAACTTCCAATGTTTTAA TTGAAAAACGTCCAAGAAACTTTGGAATCGGTATGCAACTGTTTGTACTC ATTGTTTActtattcaaaaatttatttcaggTATCTAATACAGAGCCTAT TTATGATGATCAAGTTATGCTtacagaaaaacaaacattgaccTTAAAGA TAATGTTTGGCGATAAAAGGAAGGGTAACAGCAAAAGGGTGGCACCTTCC TGTGATTGAGATATGTAAAAGCTACTTATTTACTCAagcgaaatgaaaga aaagttGTCAAgagatgtgacctcacattctattgcttttgtgCGATCTC AATAGCTTGTGTTCACATCGTTTTTAGTTCAttagaaactttttcttcaG TCCTTAGTGATTTTTTGCAATTGATTGATTTACACATTTTTAGGTGGTGA CATCCAACCAAAGAGAGACTTGGGACGTTTTGTCCTATGGCCAAAATACA TTAAATTGCAGAGGCAGAAGCGTATTTTGTACCAGCGTTTGAAGGTTCCA CCAAGCATCAATCAATTTACTCAAACTTTGGATCAGCAAACAGGTAAATC TTTGCTAAGTGATTATTTCAATGCTGTTTGCTGAAGGATTTAGCCATTTG TAAAGGCGTGTAGTGCTGAAACCTATGGGAATCCTTGTATCTTATGAGAA TGagttattcaaaatattgatttttgtgtTTCAGCAACAcaacttttcaa acttcttCACAAGTACAGACCAGAAACAAAAGCTGAGAAGAAAGCCAGAT TAACAGCTCAGGCCGAAAGCAAAGCTGCTGGTAAACAAGAAACTGCTGGA AAGAAA

Coding sequence (CDS) from alignment at sc0000016_pilon:2533679..2534584+

>XLOC_040981 ID=XLOC_040981|Name=XLOC_040981|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=804bp|location=Sequence derived from alignment at sc0000016_pilon:2533679..2534584+ (Clytia hemisphaerica_ch_hm2_pilon)
cagccGCCAAAATCCAAGAAGGTCAAGGTTAAGAAGCCTCAAGCTGCCCC
TTTCACCACCAAGGGTGCAAAAACCACCAAGAAAACTTCCAATGTTTTAA
TTGAAAAACGTCCAAGAAACTTTGGAATCGcagccGCCAAAATCCAAGAA
GGTCAAGGTTAAGAAGCCTCAAGCTGCCCCTTTCACCACCAAGGGTGCAA
AAACCACCAAGAAAACTTCCAATGTTTTAATTGAAAAACGTCCAAGAAAC
TTTGGAATCGGTGGTGACATCCAACCAAAGAGAGACTTGGGACGTTTTGT
CCTATGGCCAAAATACATTAAATTGCAGAGGCAGAAGCGTATTTTGTACC
AGCGTTTGAAGGTTCCACCAAGCATCAATCAATTTACTCAAACTTTGGAT
CAGCAAACAGGTGGTGACATCCAACCAAAGAGAGACTTGGGACGTTTTGT
CCTATGGCCAAAATACATTAAATTGCAGAGGCAGAAGCGTATTTTGTACC
AGCGTTTGAAGGTTCCACCAAGCATCAATCAATTTACTCAAACTTTGGAT
CAGCAAACAGCAACAcaacttttcaaacttcttCACAAGTACAGACCAGA
AACAAAAGCTGAGAAGAAAGCCAGATTAACAGCTCAGGCCGAAAGCAAAG
CTGCTGGTAAACAAGAAACTGCTGGAAAGAAACAACAcaacttttcaaac
ttcttCACAAGTACAGACCAGAAACAAAAGCTGAGAAGAAAGCCAGATTA
ACAGCTCAGGCCGAAAGCAAAGCTGCTGGTAAACAAGAAACTGCTGGAAA
GAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040981XLOC_040981-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000016_pilongenomesc0000016_pilon:2533679..2534584 +
Properties
Property NameValue
Aaloc283-402:787
Aaloc133-279:496
Aaloc1-129:1