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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:977955..981757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040934 ID=XLOC_040934|Name=XLOC_040934|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3803bp|location=Sequence derived from alignment at sc0000042_pilon:977955..981757- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTGTATACCAATAACGCGCCAAATTGGGCATTTTTCATTGGTTT
TGTTTTATTTTTCTCGAACAGTGAGTATTCATACATTTCTCTGATTTTGA
GTTAATTTTCCCCTTCTCACAGACCCGGTAGGATTTTTTCAGCCAGTGGG
GATACAAATAATGGACTGAAACTCGAGGGGGATTGATATTCCAATATTTT
TTTATGGCTGGGGATTTAAATTCTTTTGTTTTCAAGTCAGAAAATCCAGC
GGGCATGGGAGAAATAGCACAATATTTTTGCAGTGAGGATTGTTTTATTT
GATTATTTTCAGTGGGGACAAAAATTGGAGGATTATTTTCCACCGTGGAC
GATATATTTTAGGCAATTTTTCCAGTGGGAAGCTCTGGGGTCCTAGTGGG
GCAGTGAAGGGGGTGTTATTTTTTTATCATTTGATAAGACATCTCGCCTT
AACCTAATTGCAGCATTGTCTGTATCTTCTCTTTGCATATTTTTGATAAC
TTGTACAAAGTTGCATGTAAGTAAAGAACACGAAATCTATTGGAGGATAC
AAGTAGGTTGCCTAGCCTGAATTAAAGGAGATTCTTTGTTAGCTTATGTA
TATATAAAACATTCCCACTTTCATTTAGCTGTCTATGGTACTGAAATCGA
TTTTGTAAGCGAGCCTGCAGCCGTTTCATATTTCGAGTGTGGATCAGAGG
CTACTATCCAATGGCAATATGATGCTTCCCACAATGCTTTGAGTAGCATC
AAATGGTATGAAGCGGATGCCAATGGCAATCTAGTGGATGAGATTGCAAA
TTATGGAAACAATACTTTCCTACTCAATGAAGGATCACAGTTTACACCTG
CGAAGGAAACAAGGTGATTTACTTCAGTGCTTGATTTAGTTTTTTTACAT
ATGTTTTCCTTTCAAGCATTCGCTTTTTTAAGAACTTTGCCAGACCGCCA
ATAAACACAGATTGCGCCAGAGAACCCTGATTGCTCTCAATCGCCTAGTT
ATCAACTCGTGTTATTAACCTACAAAATCATGAGATTTATTTACCATAGA
CTGGAGTCGTTTATAATAATATTGTATAGTAATATTGGTGTTATATGATA
ACACTTCAATTGTCATGGGATGGCATTAGTTTGCATAAACTACAATTTGT
CCTTACCATTTCCTTACTATATTTGAATTAGTTTCTAGAATGATCAAGGA
AAGAAGTCTCCAAAAGTTAGAACTAGTTTGTTATCAGTAATCTTGTACCA
GGAATCTTTCTATAATCGGGGAGAAACACATCTTAGAATACTATCTGTAT
TTCGAATCTTTATTCGAATTAGATATTCCTATCGAATCAGTAAAAGTTTA
CGTTCTCATTTCGGGAGAAGAGCCTCTCGAAACATAACCAAACAAAACTC
TTGATCCAAGCCACGATAAATTTCCAAATAAAGACTATACAATTTATTTA
TTCATTTTCTTTATGTTTCCACAGGGTATCGTTTTCTCCAAATGCTGGTC
TGAAGATTGCCTCCTTTGCACCTTCCGATGAAGCCATTATCAAGATCGAT
GTTGTTTATGACAATATCGATCACGCCACTGGTCAAACTGAAATCAAAAA
CCAAGGTAAATATCCGGGGTGAATATCGCCTTTGCGTTTGACGGGCGTCT
TTCTTATAGGGATTATCAGATGATCTTTGATATTTGGCTTAGAGATACCT
TTTATGGTCCTAAGAAACTCCTCCAAAGTTTTTGACCCAACTATTTTCCA
AAGCTGAGATATTCGACTTTGAATTTTCAATTTTTTATATGAAAACAATA
GAAATTCAACGTAAAGACTGTGTAAAGACTCGTTTTTTCATTTCATATTG
CGTTAGACGGGTATCTTTCTTAACATTGATTTAAAGCGTTATATATTAGT
TTGAAAATTACTTTTACTAAGAAGTTAAACTATTTCAATGAACATTCATT
AAACATCGTCACTTGTAGCTTTGAAAAAAATCCGCCAGTTAATCCATCGA
AGCTTGGGTCTTTCTGGATGTTTTATAGATTTTTAGTCTTTCACCGGTGC
ATGCATACGTTAGAGACGTATTAATATAATTTTATCCAAATTGTTGTTTA
TTATCGCCAATCAAGCTTGTAATAAACACGAACCTTAAAAATGTTGTTTT
CTCTCTCTCAATTCCAGTTTCGGCTGTCGTGAATTTTGAAGCAGCCACAA
CATACACTTTACTGGGCGGTGGATCCGCCTCCTTATGGTGTAATGTGACC
GCCCTGCCAGCACCTTCCATTTTATGGTACCACAATGGTACACTCATACA
ATCTGATGGATATACTTATGACATTACAGGTGAATTTTACTGTTTTTCTT
AGCTGGAGTATATACATATATCAGTTATAGTTCCTCGAATACGTAATGCG
ACCTATGTAGAATTCAATCCCTAAAGGAAAATTTAATACTAAAGTTGGTG
TTTCTCCGGTCATGTTTTTATACAACTTTTGAATTCTCTTACAGAAACAT
CTACAGTTCAATCAGGCTGTGGAGCCACTTTAGTGTCATCCAGGCTAGAT
CTGATGACAATAGGCTTGAATAATACTGGAGACGTCCAATGTGCTTCTTA
TTACGAGACAACTCAAGTCAATTGGAACAACCAGACTACCAATGTTGTCG
TGGAATGTAAGTATGATACGTTTATAAAACAATTATAAAGTCGTACCCTT
ATAAGAACAAAAAGAACACTAGGTAAAAACGTGTTACAGCTGGTAAAAGA
CTATCAATCACTAACTCAAATATGGAAAGTCAAAATTAACAAAATCTACC
TGTACCTGCGTCTTTAGGATCATCTTCTTGATGACATTTGGCATCATGTT
CATTCTCTTTCCCTTGAAGCGCGGTTTTAGAAAATTGATCTCGCAGCACA
TTATTTCTTGAATTTTGTCTCATAACAATCTGCAGAGTAAAATAGAAACC
TGTAACTTTAATAGCAGCTTTCGAATTAGGTTTTGGTTTCGTTCTCATTG
AAAAGATTTTTTTAAGAGTGGAATTTTATCAATATTCTCTAGCTAATAAT
TACATTTAAATACTTTCCTTCTCAGATCCTCCCGGTGCAGTGACCGCTAC
TGAAGGAAATTTCTCCTCACCAAGCATCAATCTTGGTGCAACAACAACGC
TTTATTGTCAAGCTTACGCTAATCCGTCACCTTCGTACCAACTGGTCCGC
AACGGTGTCATCCTTGCTACCCATAATGCAACTGACGGAGAAGTTTCGTT
TTCGATCGGTCCCGTAGGTTTGTACGATGACGGGATTTATACATGTCGAG
TCATAAACAAACACGGACAAGATGATTTGGATTTAATGCTTAATATCTCA
AGTAAGAGTAAAATTTGATAAAGATATGATAGTAATTTTAAGACATTTGA
ACTTTTGCTTCTCTTCATTAAAATCTAAATGAAAGACTGAACAATACCAA
GAGCTGAAAATTTGGGACAAGTTGGAGTTTTTACAAGCTTTAATTTGATT
TTGTTGGTCGTTAACCTTTAATAAAACAAATTTGTTACTGAAAGAACGTG
TTATCTCTATTACTTCAAATGACCAATAAGCGAAGTATTTTATAAAAACT
CCATCTCATCCCCAAATTTTGAAATAGTTGCAGGTTCATTCCATTCCCAA
TTGTTATAATAATCATATTTTTTGTCTTATTGAATTTTCTCTACTTTCTC
TTCAGTTGTCCCGACGTTTTGGTCGTTCGATAATTCCATTAAGATTTACG
ATGAAGGAGACATTATAACTTTAATGTGTGGAATCAAGGCTAGCCCGTTG
GAG Coding sequence (CDS) from alignment at sc0000042_pilon:977955..981757- >XLOC_040934 ID=XLOC_040934|Name=XLOC_040934|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000042_pilon:977955..981757- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTGTATACCAATAACGCGCCAAATTGGGCATTTTTCATTGGTTT
TGTTTTATTTTTCTCGAACAATGGTTTTGTATACCAATAACGCGCCAAAT
TGGGCATTTTTCATTGGTTTTGTTTTATTTTTCTCGAACACTGTCTATGG
TACTGAAATCGATTTTGTAAGCGAGCCTGCAGCCGTTTCATATTTCGAGT
GTGGATCAGAGGCTACTATCCAATGGCAATATGATGCTTCCCACAATGCT
TTGAGTAGCATCAAATGGTATGAAGCGGATGCCAATGGCAATCTAGTGGA
TGAGATTGCAAATTATGGAAACAATACTTTCCTACTCAATGAAGGATCAC
AGTTTACACCTGCGAAGGAAACAAGCTGTCTATGGTACTGAAATCGATTT
TGTAAGCGAGCCTGCAGCCGTTTCATATTTCGAGTGTGGATCAGAGGCTA
CTATCCAATGGCAATATGATGCTTCCCACAATGCTTTGAGTAGCATCAAA
TGGTATGAAGCGGATGCCAATGGCAATCTAGTGGATGAGATTGCAAATTA
TGGAAACAATACTTTCCTACTCAATGAAGGATCACAGTTTACACCTGCGA
AGGAAACAAGGGTATCGTTTTCTCCAAATGCTGGTCTGAAGATTGCCTCC
TTTGCACCTTCCGATGAAGCCATTATCAAGATCGATGTTGTTTATGACAA
TATCGATCACGCCACTGGTCAAACTGAAATCAAAAACCAAGGGTATCGTT
TTCTCCAAATGCTGGTCTGAAGATTGCCTCCTTTGCACCTTCCGATGAAG
CCATTATCAAGATCGATGTTGTTTATGACAATATCGATCACGCCACTGGT
CAAACTGAAATCAAAAACCAAGTTTCGGCTGTCGTGAATTTTGAAGCAGC
CACAACATACACTTTACTGGGCGGTGGATCCGCCTCCTTATGGTGTAATG
TGACCGCCCTGCCAGCACCTTCCATTTTATGGTACCACAATGGTACACTC
ATACAATCTGATGGATATACTTATGACATTACAGTTTCGGCTGTCGTGAA
TTTTGAAGCAGCCACAACATACACTTTACTGGGCGGTGGATCCGCCTCCT
TATGGTGTAATGTGACCGCCCTGCCAGCACCTTCCATTTTATGGTACCAC
AATGGTACACTCATACAATCTGATGGATATACTTATGACATTACAGAAAC
ATCTACAGTTCAATCAGGCTGTGGAGCCACTTTAGTGTCATCCAGGCTAG
ATCTGATGACAATAGGCTTGAATAATACTGGAGACGTCCAATGTGCTTCT
TATTACGAGACAACTCAAGTCAATTGGAACAACCAGACTACCAATGTTGT
CGTGGAATAAACATCTACAGTTCAATCAGGCTGTGGAGCCACTTTAGTGT
CATCCAGGCTAGATCTGATGACAATAGGCTTGAATAATACTGGAGACGTC
CAATGTGCTTCTTATTACGAGACAACTCAAGTCAATTGGAACAACCAGAC
TACCAATGTTGTCGTGGAATATCCTCCCGGTGCAGTGACCGCTACTGAAG
GAAATTTCTCCTCACCAAGCATCAATCTTGGTGCAACAACAACGCTTTAT
TGTCAAGCTTACGCTAATCCGTCACCTTCGTACCAACTGGTCCGCAACGG
TGTCATCCTTGCTACCCATAATGCAACTGACGGAGAAGTTTCGTTTTCGA
TCGGTCCCGTAGGTTTGTACGATGACGGGATTTATACATGTCGAGTCATA
AACAAACACGGACAAGATGATTTGGATTTAATGCTTAATATCTCAAATCC
TCCCGGTGCAGTGACCGCTACTGAAGGAAATTTCTCCTCACCAAGCATCA
ATCTTGGTGCAACAACAACGCTTTATTGTCAAGCTTACGCTAATCCGTCA
CCTTCGTACCAACTGGTCCGCAACGGTGTCATCCTTGCTACCCATAATGC
AACTGACGGAGAAGTTTCGTTTTCGATCGGTCCCGTAGGTTTGTACGATG
ACGGGATTTATACATGTCGAGTCATAAACAAACACGGACAAGATGATTTG
GATTTAATGCTTAATATCTCAATTGTCCCGACGTTTTGGTCGTTCGATAA
TTCCATTAAGATTTACGATGAAGGAGACATTATAACTTTAATGTGTGGAA
TCAAGGCTAGCCCGTTGGAGTTGTCCCGACGTTTTGGTCGTTCGATAATT
CCATTAAGATTTACGATGAAGGAGACATTATAACTTTAATGTGTGGAATC
AAGGCTAGCCCGTTGGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:977955..981757 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1039-1134:97 |
| Aaloc | 763-1035:727 |
| Aaloc | 601-759:1308 |
| Aaloc | 439-597:1635 |
| Aaloc | 307-435:2329 |
| Aaloc | 73-303:3174 |
| Aaloc | 1-69:3804 |
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