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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000163_pilon:220115..224185+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040884 ID=XLOC_040884|Name=XLOC_040884|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4071bp|location=Sequence derived from alignment at sc0000163_pilon:220115..224185+ (Clytia hemisphaerica_ch_hm2_pilon)
atggATGTAAGCGATTATTCTGATGCAGAAATAAAGCAATCTTTGCAAGA
ATTTGGCGTAACATGTGGGCCATTAACTTCTACAACAAGAGCTGTTTATG
CAAAGAAGCTGTGTAAGTATTATTCTTTCTTTCACCTGGAATTCACTATT
gatattattataataaaaattggtaaaaaaaatatatagcaACATCTTTA
TTAACTTCAtgtaaatttgcaaaaaaaaaattttttttacaaaaacgtca
aagtTATTGAccaataacattttattttaaccttGTCCCAaataaatttc
tgaaaattttaatttgtagcattaaatttgacaaatttctgTTTATCTGA
TATTTAGCCAAATTGATTGCAACATCATCATCACAAAGTGAACCAGAAGT
TGTGCAGGCAAGACAAACCATCTCTGATGAGGATTTTTATTCTTCGGAAG
AAACAGTGACCACAAGAAGTAGAAGtatgattttaaagttttattcaTTG
ATGATCAAATGGGTTTAAGCTAAATGATTTAATCCTAACTTAATGCAAta
agaatttgtttttaaatgttaCAGTATGTTCTAAGAATCAGAGAtaattc
ttgacaaaattcAAATCTATATTACTAAACGTAGAATGTGAGTGAGCCGT
GAgggggccattatggatttttgagatggggtttcgagagttacgtgacc
gattttttggttggatggttggttgggtgggtggttgaaaacgaaagcga
aagtggtcaggggaagagtgtggaaattagcgtttttgtgaagaagtcgt
tgcagtgcaaatctttcgcaaatttaaaaacccactttcccgtggaaata
attgacgtttttgggttttttgggacccttggggcataagctacccgttg
accgcaaaaattccgaaattcgcgaattgaccgttgacaacattaggggt
aaagggacccaatgacgtcacagatttgggaaaaacttcaaaatgcgata
tctcgagtttgaaaaggagttgggaggtcggtgacccctcattggatcga
taATTTTATAGAGAATGAGATGGGAGGGGTTATAAGGCTTAAGtgtgatt
ttaaaatttggctgaatttttaggcgttttcagttgatgacgtcatcaaa
acacgtaaaatgcgatatctcgagtttaaaaaggagttgggaggtcgttg
acccctcattggatcggaaaattTATGTGGAATTAGTTGGGAGGGATAAG
AGTGGGTATATAGAGAAtttggaaaataaatatattaaaattgaggcatt
ttgggtccgatgacgtcatcaaaacctgaaaataaCAATATCTAGAGTTT
GACAAGGATTTATGCAATGATTGACCagtcattggatcggaaatcatcaa
gagaatctttTGAGTCAATAAAGAAATACTTTCAGTGAactaactagtca
tagctttcactaaatgcccccactgaaaggtcatgtcatgcactcataaa
gcttttaatgctttaaagattgaaacataaaaaataatcgggaataatta
attgatttgattattgattgatttaattattgattgattgattgattctc
tattgctactttgcctaataaaaaatagtcaagaggatactgcggataaa
atttctcaaaaagttctgcgccatcttaaatagggcgaaatagacaccaa
tcctagctaaggcccggactccactcgcctacgctgTGATTgaacttctc
aagcaaaatcttttatgttgttggtcaacagaaaaataaaggaatgccat
tgtggtccattcagacgtacagtcgagaaaagttgaaatgcgcctaattt
ctcttaaagtgcatagtactttttcatgatgcaatcttttctccaagctg
aaaggattgaatccattaaaatgatcgcagcgcagacaacgaagagacgt
gccttcagaaagctagactttttgagtttatagctatactttcactttat
ggtgtttctgtatgactgtctgtgtgcctagtctaaccaccgttaaatgc
cttcgggaaggtccctcctaacttggaaagccagaattggagctatttca
ccaaactactggagcgcaagttattaccgtgagattgggtaacttgcatc
agtggaggctaacatgcatagccctcaaatgaaagacctgactggtcatt
aaaatacaaagttaaatcaaaacaaaaatggtatagagtagagctgcgag
atttgtattttaatgaccagccaggtctttcatttgagggctatgcatgt
tagcctccactgatgcaagttacccaatctcacggtacgtaggctatcac
aactgcaaaagttgaatgtgcgcctatacaaacttttttcaggttttcca
aatagatttaccacactgaacaaacagtgaaaacactctaagtgaggtaa
atctattttgaagaccaaaaaaaaagtttgtttacattgattcacattca
attttggattcatatgcatacattctacttttttgtactttgccggtatc
ttattttaccaagttaagaaagacATTCCTGAGTTACaaccatataatgg
tctttaaagctcaagaagatctataaacaataaaggtagttattaataaa
ataacagacaaagataaattacagtttgaacaaaaatgtatacaaatgta
catttgaaaacttgagcaaacttctttaaagattccagaaaaagaattga
aatcattgctgaaatgaacttctgactaaattacagtattcagttttaaa
gacaagaaacaaaattagccatatacaaaacactttttccagtcaaagac
gaaagaatcagctcatcatcataaccagtctgccattttgtttgttttga
tttgcaaaagtaatattgtaattcgtgttatggtgtaattatatactttt
tctataatttgcatttataacactcgcttcagcttttcaatgctaaatca
aaactaatgaaatgtaatatataataatggtaatagcctataacgtaata
tgaaaatgtgtataacatttaccgctgtatgaTTTACCGCcttatttttg
cggaacacttaattggccggaaatcaaattacaaacaaacaaacgcaaag
attcgagattccagtccaatatctatgcgtgaagctatgagtgcctcctc
gtcgctgcgctcctgcgggggcaaaaagtttattacacttttgatgacgt
catttagggcCCAAATAacgtcacaaaacattaaatatGCGATTTCTCGA
GCTTCGATCagtgataaaaataatatttcgttctttgggATTAAATCAGT
CTTTAGTTTCCCATTTACTatccaaagggcttatgatgcgttcagcttat
ctactcctcggcgggtgcgacgccgggtgacggctagttaTTTTACTATT
AATGTattattttaaatgttttgccTCAGTTAACTGACCCACTGCAGCAT
TCTTCAGTGTTATCCTTAAAATTACCCACCATGCATTCTCACTCCAACTT
TTCTGAGTTTTTGAAACATTCCCTTCCAAATCTAGCCTTTCAAAGCGCCT
GTCTGTTGAAAAGATACTTGAGAGTACACCAATCTAATTAAGATTTTTAG
ATACATACCCATATGTTCTCCATGGTTGTTTTACGAGAGGACTTTCATGG
CCACTAATTAATTTTCTGTACATTTTTCTTAAGGTAGCCAGcagatcaaa
aaaattattgagcTTGACACAACTGATGCACCAATGCCAAAGTTGACTAC
CAATATCTCAACACCTCGCTCTTACACACCAGACGGTTCTAACTTAACAC
GCAGGCCCCTTAGTACACCACACCGCCCAGCAACTAAAGTTAGCAGCATA
CAGAAAACATCTACGTCTGCTGTAACCAATTCTACCGGAAACAAGAAAGG
AATTTTATCATATTGTCGTTATTTACTACCTGTCCTTGTGGTTTTGATTT
TACTCATGCTGTTAGTTTACTATCACATGGAGGAAGGCGGCTTCAAAGAA
CTTACCAGCcgatttaaataa Coding sequence (CDS) from alignment at sc0000163_pilon:220115..224185+ >XLOC_040884 ID=XLOC_040884|Name=XLOC_040884|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000163_pilon:220115..224185+ (Clytia hemisphaerica_ch_hm2_pilon)
atggATGTAAGCGATTATTCTGATGCAGAAATAAAGCAATCTTTGCAAGA
ATTTGGCGTAACATGTGGGCCATTAACTTCTACAACAAGAGCTGTTTATG
CAAAGAAGCTGTatggATGTAAGCGATTATTCTGATGCAGAAATAAAGCA
ATCTTTGCAAGAATTTGGCGTAACATGTGGGCCATTAACTTCTACAACAA
GAGCTGTTTATGCAAAGAAGCTGTCCAAATTGATTGCAACATCATCATCA
CAAAGTGAACCAGAAGTTGTGCAGGCAAGACAAACCATCTCTGATGAGGA
TTTTTATTCTTCGGAAGAAACAGTGACCACAAGAAGTAGAACCAAATTGA
TTGCAACATCATCATCACAAAGTGAACCAGAAGTTGTGCAGGCAAGACAA
ACCATCTCTGATGAGGATTTTTATTCTTCGGAAGAAACAGTGACCACAAG
AAGTAGAAGTAGCCAGcagatcaaaaaaattattgagcTTGACACAACTG
ATGCACCAATGCCAAAGTTGACTACCAATATCTCAACACCTCGCTCTTAC
ACACCAGACGGTTCTAACTTAACACGCAGGCCCCTTAGTACACCACACCG
CCCAGCAACTAAAGTTAGCAGCATACAGAAAACATCTACGTCTGCTGTAA
CCAATTCTACCGGAAACAAGAAAGGAATTTTATCATATTGTCGTTATTTA
CTACCTGTCCTTGTGGTTTTGATTTTACTCATGCTGTTAGTTTACTATCA
CATGGAGGAAGGCGGCTTCAAAGAACTTACCAGCcgatttaaataaGTAG
CCAGcagatcaaaaaaattattgagcTTGACACAACTGATGCACCAATGC
CAAAGTTGACTACCAATATCTCAACACCTCGCTCTTACACACCAGACGGT
TCTAACTTAACACGCAGGCCCCTTAGTACACCACACCGCCCAGCAACTAA
AGTTAGCAGCATACAGAAAACATCTACGTCTGCTGTAACCAATTCTACCG
GAAACAAGAAAGGAATTTTATCATATTGTCGTTATTTACTACCTGTCCTT
GTGGTTTTGATTTTACTCATGCTGTTAGTTTACTATCACATGGAGGAAGG
CGGCTTCAAAGAACTTACCAGCcgatttaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163_pilon | genome | sc0000163_pilon:220115..224185 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 232-567:3736 |
| Aaloc | 115-228:360 |
| Aaloc | 1-111:1 |
|
