XLOC_040738 (mRNA) -

Overview
NameXLOC_040738
Unique NameXLOC_040738
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000003_pilon:2072743..2073570+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040738 ID=XLOC_040738|Name=XLOC_040738|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=828bp|location=Sequence derived from alignment at sc0000003_pilon:2072743..2073570+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAAagaatatgacgtcatctttctGGTAACATCATTTGCCAAACACTT CGAACGAAGAACTTGGATACGAAGTTCATGGGGTCTGGGAACGACTTGGT TGAATAAAAAGAATTGGAAAGTGATTTTCAACGTGGGTTCGATGAAACAC GATGCAGCTGTGATCAGTGCTCAATTGCAAAAAGAAGCTGAGCGTTATAA AGACCTGCTCATTCTCGACGTTCCCGAGGACTTCCACAAACTATCACTAA AAGTTATGGTGGCCCTGCAATGGGTTTACCAAAAGTTCAAgtttaaattc attttgaaaaCAGATGATGACACTTTCATCCACGTTGATCGAGTGACGCA CATACTTCAACATGGCTGGTCAAACGAGCATTTTATTGGTCATGCTATGC GTGGTCAACCTCCTGAAAGGAATAAAGGACGATATGGAGTATCACTTAAA GAATGGCCACACAAAACGTATGATGCGTATTGCAGTGGTGGTGGCTACTT CTTGTCACAATCCATCATCGGACGAATGATCCCTCATTTCGATTGGGAGA CACCATTGAAGATCGACGACGCGTACATTGGACATTTAGTGAAGAAAGCA GGTGGAAGACCTTTGCACGCACCACAACATTTTTTGATGTGGAATGACCA TTGTACCTACACGCCAACATTCTTAGTTTCACATCCTGCGAAAACAAGTG GTTGCAGAGATTTCTTCACGAGCAAAACTTTCCTTGAGATGGGAAAAACC AAACAACATAAGTACGAAAACGaaacttctttcttttcttaccaacaaaa aatgaagaagaaaaggaacaaaaattAG

Coding sequence (CDS) from alignment at sc0000003_pilon:2072743..2073570+

>XLOC_040738 ID=XLOC_040738|Name=XLOC_040738|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000003_pilon:2072743..2073570+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAAagaatatgacgtcatctttctGGTAACATCATTTGCCAAACACTT
CGAACGAAGAACTTGGATACGAAGTTCATGGGGTCTGGGAACGACTTGGT
TGAATAAAAAGAATTGGAAAGTGATTTTCAACGTGGGTTCGATGAAACAC
GATGCAGCTGTGATCAGTGCTCAATTGCAAAAAGAAGCTGAGCGTTATAA
AGACCTGCTCATTCTCGACGTTCCCGAGGACTTCCACAAACTATCACTAA
AAGTTATGGTGGCCCTGCAATGGGTTTACCAAAAGTTCAAgtttaaattc
attttgaaaaCAGATGATGACACTTTCATCCACGTTGATCGAGTGACGCA
CATACTTCAACATGGCTGGTCAAACGAGCATTTTATTGGTCATGCTATGC
GTGGTCAACCTCCTGAAAGGAATAAAGGACGATATGGAGTATCACTTAAA
GAATGGCCACACAAAACGTATGATGCGTATTGCAGTGGTGGTGGCTACTT
CTTGTCACAATCCATCATCGGACGAATGATCCCTCATTTCGATTGGGAGA
CACCATTGAAGATCGACGACGCGTACATTGGACATTTAGTGAAGAAAGCA
GGTGGAAGACCTTTGCACGCACCACAACATTTTTTGATGTGGAATGACCA
TTGTACCTACACGCCAACATTCTTAGTTTCACATCCTGCGAAAACAAGTG
GTTGCAGAGATTTCTTCACGAGCAAAACTTTCCTTGAGATGGGAAAAACC
AAACAACATAAGTACGAAAACGaaacttctttcttttcttaccaacaaaa
aatgaagaagaaaaggaacaaaaattAGAACAAagaatatgacgtcatct
ttctGGTAACATCATTTGCCAAACACTTCGAACGAAGAACTTGGATACGA
AGTTCATGGGGTCTGGGAACGACTTGGTTGAATAAAAAGAATTGGAAAGT
GATTTTCAACGTGGGTTCGATGAAACACGATGCAGCTGTGATCAGTGCTC
AATTGCAAAAAGAAGCTGAGCGTTATAAAGACCTGCTCATTCTCGACGTT
CCCGAGGACTTCCACAAACTATCACTAAAAGTTATGGTGGCCCTGCAATG
GGTTTACCAAAAGTTCAAgtttaaattcattttgaaaaCAGATGATGACA
CTTTCATCCACGTTGATCGAGTGACGCACATACTTCAACATGGCTGGTCA
AACGAGCATTTTATTGGTCATGCTATGCGTGGTCAACCTCCTGAAAGGAA
TAAAGGACGATATGGAGTATCACTTAAAGAATGGCCACACAAAACGTATG
ATGCGTATTGCAGTGGTGGTGGCTACTTCTTGTCACAATCCATCATCGGA
CGAATGATCCCTCATTTCGATTGGGAGACACCATTGAAGATCGACGACGC
GTACATTGGACATTTAGTGAAGAAAGCAGGTGGAAGACCTTTGCACGCAC
CACAACATTTTTTGATGTGGAATGACCATTGTACCTACACGCCAACATTC
TTAGTTTCACATCCTGCGAAAACAAGTGGTTGCAGAGATTTCTTCACGAG
CAAAACTTTCCTTGAGATGGGAAAAACCAAACAACATAAGTACGAAAACG
aaacttctttcttttcttaccaacaaaaaatgaagaagaaaaggaacaaa
aattAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040738XLOC_040738-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000003_pilongenomesc0000003_pilon:2072743..2073570 +
Properties
Property NameValue
Aaloc1-828:1