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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000212_pilon:353651..355972- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040731 ID=XLOC_040731|Name=XLOC_040731|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2322bp|location=Sequence derived from alignment at sc0000212_pilon:353651..355972- (Clytia hemisphaerica_ch_hm2_pilon)
TTCTCAAATTTCTTTTCATTCGTAGAAGAAATAATCGAAAACAACATGAG
GGCTGCATTTTTTATCTACGTCGGCCTTTTTGTATTTTCGAGTGGCATGG
AAATCGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACACTC
ACTTATCTCCCTGAAGAAAATATGAACGCTGTAAGTTACTTTAATAAGGA
AATGTTTTTCCTAGAAACCTTTTTAAGATTCGAATTTTTATTTAACATCA
GCGAACTCCATCATTTTTGTTGACAGAGTCAGATGATACGTTACCATGGC
TACCCGTGCGAAATCCACAAAGTGGTGACAGATGACGGTTACATTTTGAC
TCTTCAACGAATCCCTCATGGACGTAATGGTGCCCCAAGCAATGGCATTC
CTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACTTGGTTGAAT
AATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGCAGGGTGAGT
ACAGCTCGTCTTTATTATTATTTACCAGATTATAAGCGAACATTCTGACT
CCCTTCTTTCTACTAATGTCTCCATTTCTTCATTTTTAGGTATGATGTCT
GGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACACTAAATTC
TCCGTTGATTCAGATGAATTTTGGGATTTCAGGTACGTACTGCTCAAGTT
TTTTATCAAAGACCTATTTCTTAAACGCAACAAATGATATAATTACTGAA
TATTCCATAGTTTCAGGGAGCGGTAAAATTCCCTTCAGAAAAAAATTTTG
TTGATTATGATTATTTGTAGATTATGATTATTTGTAGATTATGCTTTACT
TTAAGATTTAGATAACCATATGATAGGTTTATTTTGACCACGATCAAATG
ATCAGCATTATATCCTTAGCTTCGATGAGATGGCAAAGTATGATTTACCG
GCCAGTATAGATTACGTTTTGAAACAAACTGGTCAACAACAACTTCATTA
CGTTGGACATTCACAAGGTGATCCTAACTTATGACAGTTAAATTATCGAG
TCTTCTTTCAGCTCTTATCAAAGTCTAAAAACTCTTTTTGTTGTGTTATC
TTTTATGAAAGACTGCCCCTTGTTGTTTCGCATTAGTAAACATTTTCAAT
TCACTTTTTTAGGGACGATGATCGGTTTCATCGGGTTCGGTCAATCACCA
GAACTTGGTAAAAAAGTGAAAACGTTTTCTGCACTTGCTCCAGTGGCAAC
AGTTGGTCACATCGAAGGTGCCATGAAAGTACTCTCCTATTTCACTGGCG
AAATTGTGGTTAGTATGAATTTGTCACTTCTGATTTGCTTTCAAGTCGAC
CTAATATTCTATATATTTCGTAAGTTATATGACATACCGTCACAATGTCT
TTCCCATTGTTTAAAAGCTATTTCTTGTCTATTCTCTTATATTAGTATCT
TTTCAAGTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGATGA
AAGCCTTAGCAGAGATTGTTTGTGCGACACACATCACGGAGAGTGCATGC
GCTGACATCGTTTTCCTCATCACCGGCTTTGATACTAGTAACTTGAACGA
CACCAGGATCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCTCCGTCA
AGGATGTCGTTCACTTTGCACAGGTAAACAATGATCTTTGGTTCACAGAA
TGCATACTTATAGAAAAAATATAAAATCATTTCCAGTGATTATTTGAATC
AGTTTTGTGTCAGGATACAGTTTACTATTAAAAGAAACAGTATTCTTCGA
TCATCTTGACGGAGCTCATAAAGCAATCTATAGTGCCCCACCCCACATCC
AATGTTTTTACTACGATATCAAGGAGATGAAACGTAAATTACTTTTCCTT
TAGCTGGTGAAAAGTCAAAAATTTCAAATGTACGATTACGGCGAAAAGAA
GAATATGGAGAAATACAATTCTGTAAGTTGATTCATCTTAGGTACTTATC
AATTGAGTGTACCATTTCACCTTCAATTTATTTTTGTAGTCAGTTGGAAA
GCTCAGTTGGTGAATTGGTTTTTTGTTTTGTTTAGCCAACACCCCCTCTT
TACAACGTGACAAAGATGGAGACGCCAGTAGCTTTGTTCACCGGCTCACA
GGATTGGCTAGCGGATCCTTATGATGTTGACCACGGATTGAGGCCTCTTC
TGCCAAACATCATCCAGGATAAGAATCGCGACGAATGGAATCACATGGAC
TTCGTGTGGGGTGAAGATGCTCATGAATATTTCTATCAAGATGTCTTGAA
ACTCATCGCTAAATACTCGTAA Coding sequence (CDS) from alignment at sc0000212_pilon:353651..355972- >XLOC_040731 ID=XLOC_040731|Name=XLOC_040731|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000212_pilon:353651..355972- (Clytia hemisphaerica_ch_hm2_pilon)
TTCTCAAATTTCTTTTCATTCGTAGAAGAAATAATCGAAAACAACATGAG
GGCTGCATTTTTTATCTACGTCGGCCTTTTTGTATTTTCGAGTGGCATGG
AAATCGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACACTC
ACTTATCTCCCTGAAGAAAATATGAACGCTTTCTCAAATTTCTTTTCATT
CGTAGAAGAAATAATCGAAAACAACATGAGGGCTGCATTTTTTATCTACG
TCGGCCTTTTTGTATTTTCGAGTGGCATGGAAATCGCCTTTCGGCATCCC
AAGTGGACCAAGATGGAAAGAAAGACACTCACTTATCTCCCTGAAGAAAA
TATGAACGCTAGTCAGATGATACGTTACCATGGCTACCCGTGCGAAATCC
ACAAAGTGGTGACAGATGACGGTTACATTTTGACTCTTCAACGAATCCCT
CATGGACGTAATGGTGCCCCAAGCAATGGCATTCCTGTCTTCCTTCAGCA
TGGTCTCATCGATTCTGCTGTCACTTGGTTGAATAATCTGCCAGAGCAAA
GTTTAGGATACATTCTGGCTGATGCAGGAGTCAGATGATACGTTACCATG
GCTACCCGTGCGAAATCCACAAAGTGGTGACAGATGACGGTTACATTTTG
ACTCTTCAACGAATCCCTCATGGACGTAATGGTGCCCCAAGCAATGGCAT
TCCTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACTTGGTTGA
ATAATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGCAGGGTAT
GATGTCTGGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACAC
TAAATTCTCCGTTGATTCAGATGAATTTTGGGATTTCAGGTATGATGTCT
GGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACACTAAATTC
TCCGTTGATTCAGATGAATTTTGGGATTTCAGCTTCGATGAGATGGCAAA
GTATGATTTACCGGCCAGTATAGATTACGTTTTGAAACAAACTGGTCAAC
AACAACTTCATTACGTTGGACATTCACAAGCTTCGATGAGATGGCAAAGT
ATGATTTACCGGCCAGTATAGATTACGTTTTGAAACAAACTGGTCAACAA
CAACTTCATTACGTTGGACATTCACAAGGGACGATGATCGGTTTCATCGG
GTTCGGTCAATCACCAGAACTTGGTAAAAAAGTGAAAACGTTTTCTGCAC
TTGCTCCAGTGGCAACAGTTGGTCACATCGAAGGTGCCATGAAAGTACTC
TCCTATTTCACTGGCGAAATTGTGGGACGATGATCGGTTTCATCGGGTTC
GGTCAATCACCAGAACTTGGTAAAAAAGTGAAAACGTTTTCTGCACTTGC
TCCAGTGGCAACAGTTGGTCACATCGAAGGTGCCATGAAAGTACTCTCCT
ATTTCACTGGCGAAATTGTGTATCTTTTCAAGTTGCTTGGAGTAAGGGAA
TTTTTCCCCAGCAATTTGTTGATGAAAGCCTTAGCAGAGATTGTTTGTGC
GACACACATCACGGAGAGTGCATGCGCTGACATCGTTTTCCTCATCACCG
GCTTTGATACTAGTAACTTGAACGACACCAGGATCCCTGTGTATGTGGCT
CACACTCCTGCTGGTACCTCCGTCAAGGATGTCGTTCACTTTGCACAGTA
TCTTTTCAAGTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGA
TGAAAGCCTTAGCAGAGATTGTTTGTGCGACACACATCACGGAGAGTGCA
TGCGCTGACATCGTTTTCCTCATCACCGGCTTTGATACTAGTAACTTGAA
CGACACCAGGATCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCTCCG
TCAAGGATGTCGTTCACTTTGCACAGCTGGTGAAAAGTCAAAAATTTCAA
ATGTACGATTACGGCGAAAAGAAGAATATGGAGAAATACAATTCTCTGGT
GAAAAGTCAAAAATTTCAAATGTACGATTACGGCGAAAAGAAGAATATGG
AGAAATACAATTCTCCAACACCCCCTCTTTACAACGTGACAAAGATGGAG
ACGCCAGTAGCTTTGTTCACCGGCTCACAGGATTGGCTAGCGGATCCTTA
TGATGTTGACCACGGATTGAGGCCTCTTCTGCCAAACATCATCCAGGATA
AGAATCGCGACGAATGGAATCACATGGACTTCGTGTGGGGTGAAGATGCT
CATGAATATTTCTATCAAGATGTCTTGAAACTCATCGCTAAATACTCGTA
ACCAACACCCCCTCTTTACAACGTGACAAAGATGGAGACGCCAGTAGCTT
TGTTCACCGGCTCACAGGATTGGCTAGCGGATCCTTATGATGTTGACCAC
GGATTGAGGCCTCTTCTGCCAAACATCATCCAGGATAAGAATCGCGACGA
ATGGAATCACATGGACTTCGTGTGGGGTGAAGATGCTCATGAATATTTCT
ATCAAGATGTCTTGAAACTCATCGCTAAATACTCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212_pilon | genome | sc0000212_pilon:353651..355972 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1033-1269:238 |
| Aaloc | 964-1032:420 |
| Aaloc | 736-963:878 |
| Aaloc | 592-735:1159 |
| Aaloc | 493-588:1403 |
| Aaloc | 400-489:1733 |
| Aaloc | 181-396:2047 |
| Aaloc | 1-180:2323 |
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