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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000212_pilon:349059..352884- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040730 ID=XLOC_040730|Name=XLOC_040730|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3826bp|location=Sequence derived from alignment at sc0000212_pilon:349059..352884- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAAT
TCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTGG
TAAGAAAAATCATTCAGTTATCACATCTCTTCTTCTTTAAATAATCACCT
AGAATAAGTATCATTTCCTGGGGATATTTCTTTTTCAGCCAGAAATGATC
CGTTACCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGG
CTACATCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGG
GAGGAGGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCC
ACGTGGACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGA
TAATGGGTAAGGGACCAAGTTTTTCCTTTTCGCATCAGTTATTATTAGTC
GTTATTTCTTAGATCAGACTTACAAACTAAATATAAGGCAGGCGCAAATG
AGCCCAACGTCTTATTGGTCAGTCATGCCGAAAGTTGTTGTTTATGCGAA
AATTTTCATCTGGTATTTTGAACAACGATGAAATTGAAATGTTAGATGTT
TTTATTGTTTCGATCTTAACACAGGATCAAAAGCAACTTGTATGGATTAG
ATAAATCAAATCATTTAAAAACTATTTGTTTAGATTTGATGTATGGTTGG
GAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCTTACGACC
AAAGATGATAAATATTGGGACTTCAGGTATTTGTTTTCTTTGATATTTAT
TTCACTGTTAAAGATAATTTGAGTAGACGCGTTGAATCCCAAGCACTTTC
ACTTTTAAACGTTTTCATTGCTACCTTCATCTGACGAAGCTTTTACACCA
TTTAATTTCGTAGCTGGGATGAAATGGCGAAGTATGACCTTCCTGCATGT
GTGGAATACGTACTGAACGTGACTGAACATCAACAGCTGCATTATGTCGG
TCATTCACAAGGTATGCTTTATTTCTGTATAAACCCTCAAGGGTGCTATG
ACTGGCTAAGATCGAATATCAAGACTATATGATTTATCGTGAAACTCCTT
TAACTCGATCTCGTTCGATTCAGGCACAACAATTGGTTTCGCTGGGTTCA
GTCAAAACAAAGTTCTTGCATCAAAGATTCTAACATTTTTCGCTCTTGCA
CCGGTGGCCACCGTTCAACACATCAAAGGAGCCATTAAATTTCTTTCCAA
CTTCGCTCCATTTATGAAGGTATGTCTTTGATCCACTTAAACGATTCACC
AACTGAGAGATTTTCATTGGAGTTGATAGAATATCTAAAATGTTTGGGTG
TTTTCGATTCGATACAGGAAATGTGAGATTTTTTACACACATAAACCAGA
CCCGACAAGAAAAAATTATGGGAAATTATCAGGGTATGGGAAAAATGAAA
GATTTCTTTGTTCATTTATAATATACATTAACTGAAAATTCTCTCTTCAG
AAAATCATTGATTTGTTTGGTATCCGTGACTTTTTGCCATCGAATGCCAT
CCTTGAATTCATTGCGCAAGAAATTTGTGGACATTCGCATTCGTCAGAAA
AAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGATTTGATACGAGTAAT
TTGAACGATACAAGGTTACCTGTCTACCTTTCCCATCTGCCCTCTGGTAC
ATCCGTTAAAGACTTCTTGCATTATCTTCAGGTTAGTAAACATCTCACAT
AACTTCCCTATTACATCAATGCTTTGTTGATTCGTAGCAATGGATGTTTC
CTTGAAAGCTTTGATGCTAGTAGCGTTAACAGTCTCTTTTGGTAGCTGGT
TCCATGCTGTCACACATCGATAATAAAATGGCTTGGTCTGGACACCTCTG
AATCCATCGTCTGCAAAGTTTGGTATCAGTTCGTAATCGTGAATTCGAGA
TGGACGCACTCTGCGAATAAACATTCTAACTGCGGTGCCCTTATCGTAGA
AGTGCAAGTGTTTGTAGATCTGAACCATGTCTCCGAAGTGTCTTCTGAAT
TCGAGAGAAGGCAAGTCAAGTTTTCGTAGGCGCTGCTCGTATGGTAGATT
ACTTAACCTTCTGATACTTCATAATGTGCTTTCTTATAAATGATTCCATT
AACTTACAGACTACTGAAGTCGAACTAACAGGTCTATAATTTATCGCAAG
GTTTTGGGCACCCCTTTTATAAATTGGAGTGACATGTGCCATCTTCCAAT
CTTTTGGTATTGTTCCCTCTGACAAATTCTTGTTCATGATGATAGTCAGG
GGTTTGGCTAGATGGTCAATCAGTTCAACTAACATTTTCGGGTGTATATC
ATCTGGACCGAAGGATTTACTCACGTCCAGCAATTTTATCTGTTTTCTCA
TCATATCTTCTGTTATGATGATGTTCTCAACTTGATTCTCCGTTCGTGTA
GGAAAGTCGGGAATCGTTTCCGGGGGCTCATGATAGACGCTGCAAAACTG
TTTTTGTAGGATATTAGCCTTGTCGAGATCGTCATGTTTAATCGATGATT
TGTCATCAGGGTTTTCAAGTAGTGGTGAGACTTCGCTTGATGACTTAAGT
TTAGCTTTTACATGAGACCAAAACATCTTTGGCTTTTCCTTGGATTTATC
ACAAATGCTTTTTTCATAAGTCCTGTGGGCCTTTGACATCAAACGATAGT
GTAATTGACACTTTGGCGATCTCTGTCGAGAGGTGCAGATCTTAACCACC
TTCTATGGAGCGTTTTCGTCAACTTGATTTCATCTTGAAGATTCTTATTA
ATCGGAACTTTACCTTTTTTCCTCCAAAAATCGTTTCCAACTTCTTTCAA
AGGGACAAACCGATTTCTGAGATAAATGACAACTTTCTTGAACGATTCCC
AAAGATCTTTCACTGATTTATTGATAAGTTCCTCTACATCGAGTTGGTTC
ATTAACATGTTGATAGAGATATGCGTCTTTCAAAGCATTTAAGAATTTCT
CTTCTTTGCTATCCTCCAGATACGGGGTGGTCCAGTTTTCCAAATTGATT
GTTGGAAAGTTGAAATCTCCTAACAAACATTTGTGCGAATATTTCTTGTT
TAATGCAATGGACTTGATCAATAAGTTTAGGTTGTTGTTGTTTTCGTTAG
AGGACGCAGATCTAGTTGGGCTTCGATAAATGCATGCAACAGCGAGCAAA
TCTTTTCCTGATAGTTGTACTTCAATCATGCAGACTTCATTGAAAGTCAC
TGGAGGCTTGACATCGATTACCAAGTGTTTAATGGAGATATAGCTTAATC
ATTGTCGTACAACACTTCGTTCTACGCAAGATACATTCTGGTACAGGGTA
GATTTGAGTGTAAATTTGATGTTCTTTCTTGTAGATGGTGAAGAGCGGTA
AATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAACTCAATTAT
CATCAGGTATACCCTTTCTTACTTGCAGCAAAAAGCTTTTAGACTGACTT
GGACTTCTTATTGCTCCTTGTGGTGGATCTGAAATCATGCAGGCTGTAGT
ATTCTAATATTTTAACTTGACTTGGATTTTCAGAGCACACCACCACTGTA
CAATATTTCATCATGTGAAGTACCCGTCGCCATTTACAGTGGAAGTCAAG
ATTGGTTAGCTGACCCTGAAGATATTCACAACTCAATACTACATTTCCTT
CCCAACATTTTATCCACTAAAAACTTAGATAGTTGGAATCACTTAGACTT
TGTTTGGGGCATCGAGGCCAACCGATTTGTGTACACAGATGTTGTCAAAC
AAATGTTGGAACGAACTGATTTGTAA Coding sequence (CDS) from alignment at sc0000212_pilon:349059..352884- >XLOC_040730 ID=XLOC_040730|Name=XLOC_040730|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000212_pilon:349059..352884- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAAT
TCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTGA
TGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAATT
CTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTGCC
AGAAATGATCCGTTACCATGGATACCCTTGTGAAACACATAACATCACCA
CACAAGATGGCTACATCCTGACACTTCACCGCATTCCTCATGGTAGAGAA
AAGGGTGAGGGAGGAGGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGA
TTCGTCTGCCACGTGGACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCA
TTCTCGCCGATAATGGCCAGAAATGATCCGTTACCATGGATACCCTTGTG
AAACACATAACATCACCACACAAGATGGCTACATCCTGACACTTCACCGC
ATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGAGGCTTCCCGACGTTTCT
ACAGCATGGTTTCGTTGATTCGTCTGCCACGTGGACCATGAATCCCCCCT
CTCAAAGTTTGGCTTTCATTCTCGCCGATAATGGATTTGATGTATGGTTG
GGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCTTACGAC
CAAAGATGATAAATATTGGGACTTCAGATTTGATGTATGGTTGGGAAATA
GTCGTGGCAATGTTTATTCGAACAAGCATACCCATCTTACGACCAAAGAT
GATAAATATTGGGACTTCAGCTGGGATGAAATGGCGAAGTATGACCTTCC
TGCATGTGTGGAATACGTACTGAACGTGACTGAACATCAACAGCTGCATT
ATGTCGGTCATTCACAAGCTGGGATGAAATGGCGAAGTATGACCTTCCTG
CATGTGTGGAATACGTACTGAACGTGACTGAACATCAACAGCTGCATTAT
GTCGGTCATTCACAAGGCACAACAATTGGTTTCGCTGGGTTCAGTCAAAA
CAAAGTTCTTGCATCAAAGATTCTAACATTTTTCGCTCTTGCACCGGTGG
CCACCGTTCAACACATCAAAGGAGCCATTAAATTTCTTTCCAACTTCGCT
CCATTTATGAAGGCACAACAATTGGTTTCGCTGGGTTCAGTCAAAACAAA
GTTCTTGCATCAAAGATTCTAACATTTTTCGCTCTTGCACCGGTGGCCAC
CGTTCAACACATCAAAGGAGCCATTAAATTTCTTTCCAACTTCGCTCCAT
TTATGAAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTTGCCATCG
AATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATTCGCATTC
GTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGATTTGATA
CGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCATCTGCCC
TCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGAAAATCATTGA
TTTGTTTGGTATCCGTGACTTTTTGCCATCGAATGCCATCCTTGAATTCA
TTGCGCAAGAAATTTGTGGACATTCGCATTCGTCAGAAAAAGTGTGTGGA
AACATCGTCTTCTTGATCGCTGGATTTGATACGAGTAATTTGAACGATAC
AAGGTTACCTGTCTACCTTTCCCATCTGCCCTCTGGTACATCCGTTAAAG
ACTTCTTGCATTATCTTCAGATGGTGAAGAGCGGTAAATTCATCATGTAC
GATTATGGTTCTACTGAAAAGAATCAACTCAATTATCATCAGATGGTGAA
GAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAAC
TCAATTATCATCAGAGCACACCACCACTGTACAATATTTCATCATGTGAA
GTACCCGTCGCCATTTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGA
AGATATTCACAACTCAATACTACATTTCCTTCCCAACATTTTATCCACTA
AAAACTTAGATAGTTGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCC
AACCGATTTGTGTACACAGATGTTGTCAAACAAATGTTGGAACGAACTGA
TTTGTAAAGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCG
TCGCCATTTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATT
CACAACTCAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTT
AGATAGTTGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGAT
TTGTGTACACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212_pilon | genome | sc0000212_pilon:349059..352884 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 958-1200:244 |
| Aaloc | 886-957:443 |
| Aaloc | 655-885:2327 |
| Aaloc | 511-654:2702 |
| Aaloc | 412-507:2913 |
| Aaloc | 319-408:3143 |
| Aaloc | 100-315:3639 |
| Aaloc | 1-99:3827 |
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