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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000034_pilon:1168636..1172692+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040675 ID=XLOC_040675|Name=XLOC_040675|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4057bp|location=Sequence derived from alignment at sc0000034_pilon:1168636..1172692+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgaaaatgaggaACGAAGCGTGCATAGTTGGTATTATCTTGTT
GCTGGTAATTGGTAAGAAGATTATTCATTCATTTTCTCCAACTTTGCCGT
CCGAACACCTGTGAAGGTTGACGAAAGAATAGGAACCATTCGTTTAGTTC
TGAAGAAACTGATTACCTTGaggaaactaatttttgcaagAAGTAATTCC
GACGAATTTGGCGAGACTTGCTAAAAATATTTCGTACTTAGTTCTCGCTA
TGTTTCCTTATAGTGAGTGACGAAACatagaaataaaattattcattcat
ttttctccatttttaagGTTTGGAGGGAGCTTTCAATCCACTCGTTCAAC
AGAGTGAAGTGGAAGTTTATTTCAATCGAACGTTGTCCGTGAATATATCA
TTACAAGGTTTAGTAGTTGGTGACAGCCTCGTAGCTTTTGATATTCACGC
CGGAGATGGTGGAGCAATTAACACTTATGGTAAAAATGGACAATTTTTGG
TATTTGTTAAGCCTGCAGACGGTAATAAATTTGGTGAACGATTGGAAATG
GACTTCTCGAAAGAAGAACAGCGTTTGACTTTGATGATAAAGAACATGAA
ATATGAAGAAGATGGAATGGTCATCAAATCGAAATTGGTTTACACAAATC
TAAAGGGTGACTATCTACCTCGTGAAAACTTCACTATTGTTAAAGTCATA
GGTGAGTAATCAGagtttattttacaaaataaatcatCAATAAAAGAATA
TCTAACGAAAGAAAGAGACACACCCCAAAGGGATGTTGGCACTAGGATAT
GGAAAATAATGTATACGCTGCCTAAAACAATGTGCACGTGTGCGGCCTTT
AAGGCTGGACCCTTAAGTCTTGGggacacaaaaagttttttcgcgttggt
gcaatgtaacacatgctccatcccaccaacctgaaacgctttctcgtgtc
tccaccccatttttattttaataacatttgtgcttctctcactttttcaa
aattggttcgaatcaattttgttcCATCGTCctagggacaaaatcagcgt
gtcttttgggtatttccctcactttttgtcccatgaaacaaaaaaagaaa
ccatgagacacgcacttttttcttgtgttggtgggatggagcatgttgca
ttgcaccaaagcgaataaaacttctcgtgtccccaagcctttacacttcc
ttttaatatttttccaaaaaaaaaaaattatttgtcacAGTTTTTACCTA
CTTAAGAGGGCAAATTTTATTGACGTTTCCCAAATTCTATCACATGGTTT
CGTATTTTACCTTGATCTTTCTTTATCTCCCCCCATCCCCGCCAGTGCAC
AATAAAACaagattcattttttgtgatttgtGTCTTCACGTTTAAAGGAG
CACCTGGGCGATGTGAAAATGAGACTTTTGAAGACGAACCTTCAATGGAT
CCTTTATCATACCTCGAGATCAACGCAACAGAAACTTTAAACTTCACCAG
ATATCTATGCGGAAATCCTCAACCGAACGTTACTGTCAACTTTGGAGATG
AAGTCTTGGACGTGGTGATAACAAACGTATCAAAACATTCGTACAAGTTC
GAagcaaagaaagaagaaatttcaacagaagattgtgggaagaaattttc
atatACAGCGTCAAATGAGTATGGCGAAATCAACCAAGAAACAGAATTGA
GTGTTAAATGTAAGTTTCAAAACTCCAGTTGAAGATTTTATCTTGATATT
GTTTCCTACTTTCTAAgtttcaatatttcaatcattttGTCATCTCACTC
GATCTATAAATCGAGATTATTTTGGCGCCCAATTGGTTTAGGAACTTCAC
TCACTAATTTATTCACGTTAATTGATGtgatcaaaatttgatttgacata
ctcaatatttttaatttcagtCGATCCAACTCCGAAGTCGGTTTCATCGA
AGAAAGAGAATTTCTGTATCACCACTGAATTCGAGCCAACAAATGCTGGG
ACATGTTTAGCGACTTATTCTGTCGTGTACTATGTTGAGcaacctactac
aactacaacgaccaccactaccacaacaacaacgaccacccctacaacaa
cgacaacaactacaaggatagcaccaaccacacgatacaacacaacactc
gctccaaccaggaacacgaacatcacaacaacaaatcatccgacaacacc
aacaacaaacacaacagttaagaacgaaaccaacaacaaTTCATCTTCTG
AACACTTTTTCGCAGAGGACACAAGCATCATAAACAACGTTGACAGCAAC
AGTGGCAACTTAATCATTCTCATGAGATTTGATTTAAACTCAACCCAAAC
CACTCACGAATATTGTTTCAACGCTACGGAAAACAACAGCACTTTCTCTT
ATAATACCATGTCAGCAAATGACTTTTACAACATACAAGCTGTCCAAGTT
GTAGGTGATTTCAGGGGCCACAAAAGTAAATCTCCGATGATCACACCAAA
GCTTATcacaacaaccacaacaacaacaacaaccacaacgacgacaacaa
cgaccactacaccaacgacgaccacaacttcaacgacaaccacgacgaca
ccaGAGCCAACAGAGCCTACaacaaccacaaccacaacaaTGGAACCGAA
AGAAACAACAGGTGCTCCCCCTGAAACTGGAGGTAAGTCCTTCACACACA
ATTCAGTTTAGCAAATTGCCACCTTCGGAAGTTCGCAGTTCGTGAAGAAA
ATACGGTATGCTTCAAACTTCCTACTGTTCACCTGCTTCCTTTGGAAATT
GACAGTTGGAGGAAAAAATACAATCTGCACagagaaaacttaaaaatatc
tCCTTCTTGGCCACCTAAGCAGCATCAATATTAACATTTTTTCTTCGACA
CTTTCAACACTCGAATAGCATTTTGAGTCTTTTACAAGTCTCTCATATCA
TCCCCTTTCTACCATGTCTTAGAAACGAGTGAAGAAGAACGAAAGAAGAA
GGTTTTGGTTACAGCGATCGGCGTCGGTTGCGGATTGTTAGCATTCATGA
TTCTCCTTATCATCGTATGGTGTATTTGTTGCAAACGAAAAGGTAACCCT
TCACTATATTAACGTCATTTACGGTTTGAAGCACATTACTCACACGTTTT
GTATAAAAACATAGGGTTTTGATATTTGGAATATattaaggcttcgtgga
ctcttaaacatccgatttcttagaaaatcgtACAGAAATACTCAAACAAT
GGTGATATTAAGActtaaaacttcaaaaagtttagaTCATCCGAAGGATT
AAAGATTTTTGGATAACTCGTATCCTGAGAGTTACTAAGTGAACATTTAT
CACATCTGATCTTGCTTGATGTTGAGAAtaataatttaatttaaatcTCA
TTAAGTCAGATATCGAGGCCGTAAGCCAGTCACGCATCTCAAATAGTTCA
AGTGTCCATCATTGCACAATgagaatgataaaaattaagagaaatccaat
aattgaatatttttaaccgaatgattcttttttttctcgcaGAATCGGGC
AAGAACAATCTTCAGATGAAATCCATTCATGAATATGACGCTGAGGCAAA
CGGATCGACTTCAAATGGTGATATAAATGAACCCCAATTGACAGGATTCG
AACCATCCAAAACCGATTTGACAGACGGgggaaaaatcgggaaaacggAA
TCGAACAATAACATTAGCGAGAACGGGAAAGTAAAAAATGGGGATGCAGG
TGTTATCAATGAAACCTTTAAAGATGATGAAGATAGTTCCAATAAGTCAG
ACGTAGATAAGGATGAATCCAATCTATCGAATGACGAAGAGAAGAATTCC
AATACTTCAGACGACGAGAAGGATAAGTCCAATCCACCAAATGTGGAATC
TGATAACAAACCAGAATCGCCAAAAACGAATCATGAGTCTGACGAAAAGA
ATGAGAAGGGTTCGGcaaggaaaaatgaaatttcggAGTCTCCGATTGAA
TCCGAAAGTAAACCCGATTCCCCGATTGAAGAAAATGAATCTTTCGAGGT
AATTTAG Coding sequence (CDS) from alignment at sc0000034_pilon:1168636..1172692+ >XLOC_040675 ID=XLOC_040675|Name=XLOC_040675|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4308bp|location=Sequence derived from alignment at sc0000034_pilon:1168636..1172692+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgaaaatgaggaACGAAGCGTGCATAGTTGGTATTATCTTGTT
GCTGGTAATTGatgaaaatgaaaatgaggaACGAAGCGTGCATAGTTGGT
ATTATCTTGTTGCTGGTAATTGGTTTGGAGGGAGCTTTCAATCCACTCGT
TCAACAGAGTGAAGTGGAAGTTTATTTCAATCGAACGTTGTCCGTGAATA
TATCATTACAAGGTTTAGTAGTTGGTGACAGCCTCGTAGCTTTTGATATT
CACGCCGGAGATGGTGGAGCAATTAACACTTATGGTAAAAATGGACAATT
TTTGGTATTTGTTAAGCCTGCAGACGGTAATAAATTTGGTGAACGATTGG
AAATGGACTTCTCGAAAGAAGAACAGCGTTTGACTTTGATGATAAAGAAC
ATGAAATATGAAGAAGATGGAATGGTCATCAAATCGAAATTGGTTTACAC
AAATCTAAAGGGTGACTATCTACCTCGTGAAAACTTCACTATTGTTAAAG
TCATAGGTTTGGAGGGAGCTTTCAATCCACTCGTTCAACAGAGTGAAGTG
GAAGTTTATTTCAATCGAACGTTGTCCGTGAATATATCATTACAAGGTTT
AGTAGTTGGTGACAGCCTCGTAGCTTTTGATATTCACGCCGGAGATGGTG
GAGCAATTAACACTTATGGTAAAAATGGACAATTTTTGGTATTTGTTAAG
CCTGCAGACGGTAATAAATTTGGTGAACGATTGGAAATGGACTTCTCGAA
AGAAGAACAGCGTTTGACTTTGATGATAAAGAACATGAAATATGAAGAAG
ATGGAATGGTCATCAAATCGAAATTGGTTTACACAAATCTAAAGGGTGAC
TATCTACCTCGTGAAAACTTCACTATTGTTAAAGTCATAGGAGCACCTGG
GCGATGTGAAAATGAGACTTTTGAAGACGAACCTTCAATGGATCCTTTAT
CATACCTCGAGATCAACGCAACAGAAACTTTAAACTTCACCAGATATCTA
TGCGGAAATCCTCAACCGAACGTTACTGTCAACTTTGGAGATGAAGTCTT
GGACGTGGTGATAACAAACGTATCAAAACATTCGTACAAGTTCGAagcaa
agaaagaagaaatttcaacagaagattgtgggaagaaattttcatatACA
GCGTCAAATGAGTATGGCGAAATCAACCAAGAAACAGAATTGAGTGTTAA
ATGAGCACCTGGGCGATGTGAAAATGAGACTTTTGAAGACGAACCTTCAA
TGGATCCTTTATCATACCTCGAGATCAACGCAACAGAAACTTTAAACTTC
ACCAGATATCTATGCGGAAATCCTCAACCGAACGTTACTGTCAACTTTGG
AGATGAAGTCTTGGACGTGGTGATAACAAACGTATCAAAACATTCGTACA
AGTTCGAagcaaagaaagaagaaatttcaacagaagattgtgggaagaaa
ttttcatatACAGCGTCAAATGAGTATGGCGAAATCAACCAAGAAACAGA
ATTGAGTGTTAAATtCGATCCAACTCCGAAGTCGGTTTCATCGAAGAAAG
AGAATTTCTGTATCACCACTGAATTCGAGCCAACAAATGCTGGGACATGT
TTAGCGACTTATTCTGTCGTGTACTATGTTGAGcaacctactacaactac
aacgaccaccactaccacaacaacaacgaccacccctacaacaacgacaa
caactacaaggatagcaccaaccacacgatacaacacaacactcgctcca
accaggaacacgaacatcacaacaacaaatcatccgacaacaccaacaac
aaacacaacagttaagaacgaaaccaacaacaaTTCATCTTCTGAACACT
TTTTCGCAGAGGACACAAGCATCATAAACAACGTTGACAGCAACAGTGGC
AACTTAATCATTCTCATGAGATTTGATTTAAACTCAACCCAAACCACTCA
CGAATATTGTTTCAACGCTACGGAAAACAACAGCACTTTCTCTTATAATA
CCATGTCAGCAAATGACTTTTACAACATACAAGCTGTCCAAGTTGTAGGT
GATTTCAGGGGCCACAAAAGTAAATCTCCGATGATCACACCAAAGCTTAT
cacaacaaccacaacaacaacaacaaccacaacgacgacaacaacgacca
ctacaccaacgacgaccacaacttcaacgacaaccacgacgacaccaGAG
CCAACAGAGCCTACaacaaccacaaccacaacaaTGGAACCGAAAGAAAC
AACAGGTGCTCCCCCTGAAACTGGAGtCGATCCAACTCCGAAGTCGGTTT
CATCGAAGAAAGAGAATTTCTGTATCACCACTGAATTCGAGCCAACAAAT
GCTGGGACATGTTTAGCGACTTATTCTGTCGTGTACTATGTTGAGcaacc
tactacaactacaacgaccaccactaccacaacaacaacgaccaccccta
caacaacgacaacaactacaaggatagcaccaaccacacgatacaacaca
acactcgctccaaccaggaacacgaacatcacaacaacaaatcatccgac
aacaccaacaacaaacacaacagttaagaacgaaaccaacaacaaTTCAT
CTTCTGAACACTTTTTCGCAGAGGACACAAGCATCATAAACAACGTTGAC
AGCAACAGTGGCAACTTAATCATTCTCATGAGATTTGATTTAAACTCAAC
CCAAACCACTCACGAATATTGTTTCAACGCTACGGAAAACAACAGCACTT
TCTCTTATAATACCATGTCAGCAAATGACTTTTACAACATACAAGCTGTC
CAAGTTGTAGGTGATTTCAGGGGCCACAAAAGTAAATCTCCGATGATCAC
ACCAAAGCTTATcacaacaaccacaacaacaacaacaaccacaacgacga
caacaacgaccactacaccaacgacgaccacaacttcaacgacaaccacg
acgacaccaGAGCCAACAGAGCCTACaacaaccacaaccacaacaaTGGA
ACCGAAAGAAACAACAGGTGCTCCCCCTGAAACTGGAGAAACGAGTGAAG
AAGAACGAAAGAAGAAGGTTTTGGTTACAGCGATCGGCGTCGGTTGCGGA
TTGTTAGCATTCATGATTCTCCTTATCATCGTATGGTGTATTTGTTGCAA
ACGAAAAGAAACGAGTGAAGAAGAACGAAAGAAGAAGGTTTTGGTTACAG
CGATCGGCGTCGGTTGCGGATTGTTAGCATTCATGATTCTCCTTATCATC
GTATGGTGTATTTGTTGCAAACGAAAAGAATCGGGCAAGAACAATCTTCA
GATGAAATCCATTCATGAATATGACGCTGAGGCAAACGGATCGACTTCAA
ATGGTGATATAAATGAACCCCAATTGACAGGATTCGAACCATCCAAAACC
GATTTGACAGACGGgggaaaaatcgggaaaacggAATCGAACAATAACAT
TAGCGAGAACGGGAAAGTAAAAAATGGGGATGCAGGTGTTATCAATGAAA
CCTTTAAAGATGATGAAGATAGTTCCAATAAGTCAGACGTAGATAAGGAT
GAATCCAATCTATCGAATGACGAAGAGAAGAATTCCAATACTTCAGACGA
CGAGAAGGATAAGTCCAATCCACCAAATGTGGAATCTGATAACAAACCAG
AATCGCCAAAAACGAATCATGAGTCTGACGAAAAGAATGAGAAGGGTTCG
GcaaggaaaaatgaaatttcggAGTCTCCGATTGAATCCGAAAGTAAACC
CGATTCCCCGATTGAAGAAAATGAATCTTTCGAGGTAATTTAGAATCGGG
CAAGAACAATCTTCAGATGAAATCCATTCATGAATATGACGCTGAGGCAA
ACGGATCGACTTCAAATGGTGATATAAATGAACCCCAATTGACAGGATTC
GAACCATCCAAAACCGATTTGACAGACGGgggaaaaatcgggaaaacggA
ATCGAACAATAACATTAGCGAGAACGGGAAAGTAAAAAATGGGGATGCAG
GTGTTATCAATGAAACCTTTAAAGATGATGAAGATAGTTCCAATAAGTCA
GACGTAGATAAGGATGAATCCAATCTATCGAATGACGAAGAGAAGAATTC
CAATACTTCAGACGACGAGAAGGATAAGTCCAATCCACCAAATGTGGAAT
CTGATAACAAACCAGAATCGCCAAAAACGAATCATGAGTCTGACGAAAAG
AATGAGAAGGGTTCGGcaaggaaaaatgaaatttcggAGTCTCCGATTGA
ATCCGAAAGTAAACCCGATTCCCCGATTGAAGAAAATGAATCTTTCGAGG
TAATTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000034_pilon | genome | sc0000034_pilon:1168636..1172692 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1642-2154:3545 |
| Aaloc | 1522-1638:2975 |
| Aaloc | 760-1518:1923 |
| Aaloc | 448-756:1400 |
| Aaloc | 64-444:320 |
| Aaloc | 1-60:1 |
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