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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000034_pilon:1139502..1143407+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040669 ID=XLOC_040669|Name=XLOC_040669|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3906bp|location=Sequence derived from alignment at sc0000034_pilon:1139502..1143407+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCTTTGGGACAATTGATTTGTTTGACCGCAATCACATTACTGGC
GCTGATAAAGGTACGGttcaaatgaagatttttttagtCAACATTAACAT
CAGATCTATCTTTCTTCCGAATTTTATTACCAAAACTTGCGTATTAGTTT
GTATCTTGAGACATGCGTTTAGCTTGCAAAAAACTATAAAGTCGCCTTCG
TACAATTTATGTTAATGTATAAAAGTCGATCCATTTTATTACAAAAAGTA
GTTGCGAGTTTACGCGAATTCTAAATTTTGTCCTACAATTTTGAGAATGT
GACAACGATGTATTTAAGGTTTGAAAATAACTGCATAAGTTCACGATTCT
TAATTAAGATGAAACCAAAAGACTATGGTCTAATTCCCTGAAAAATATTA
TGTATATCCAATAAACTTAAACTTTTTAGTGAGCTAAACCATAGAATTGC
TTTCCCCTCAAAATGATTTTCAGTGGCATAAAATAAATGACTAGATTTga
gatttcaaaaagatttcaacttttttatttagCTTGCTGAGAGCTCTGGA
AGGATGGAAATTAAACTTCTGAGTTATGCTAATCAAAAACATCGAATGTC
GAACGGCCGTTGCTGTGAAGAAGGTTTAGAGAAAGATTGCAAGAGAAACA
AGAACAACCGATGTATTGAATGTACAATGGAGTGCGACCCACAATTCAAA
TTCGAAATGATACGAAACAATGAACGAGTGATGTTTTATAACACAAGCAC
TTTGGAGCATaaagataattttgatttcaaagatGTCTTGGAACCTAATA
TTCAAAACCCATTTATATTGAATCTCTCGTCGTTCAAGGTAAATCATTTT
GGTGTTGCGTATTTTATGATTACTTTGATGTGGGTTTATTTCAGTATAAT
AAGCCTTTTTACACTTAGCGCAGTGAGATCTCTCTAACTGTAGAAATCCG
TTAGCGTTAACGTTAATAGTTCTCTCTCTAACATAGAAATCCTATCCTTT
CAACGTTGTTTTACGACCAGGGCTTTCATATAAGGTTAAATGAACGTTTA
AATAACGAAAAGAACAATGTCTTCGTCTATTTCGATGTCTAGTTTTGCCT
TTTCAGGAAGTAAACACAATCATCATATCTATAATTATGCTTCTACGGAA
GTTTAAAAAGCAGAAAGTTCTTGATTAATTATTCGCTCAAATAATTAAAA
CATACATTTTTAGGGCAATTTCACGTTTTCGATCAAATCGTTCGATCACG
ATGATCAGGGAATCGATCCCATCGATGAATCGATCTTTCAGTTCAACACA
AAAAGCATGGATACAAAGATACAACCGAACAATGAAACTGTTTATCTCTG
CTCAAGCGGAATAGTTACCAAAACTAATTTCACTATAAGGTAAACCCTAC
GCCTGTATGACTACTCTAATTTGACTCGATCATATGTCAGTTCTTCAAGT
TCCCAGGGGGGAGGTTAATACTAGGATTTTGAAGGACTAAAACCCAACCC
TCaccatccgcacatacccagtaCGCTTTTCAGACTATAGGGATTTTTCT
GCcatgaaatctttaaaaaactatatttaattttatttcataaaactACT
TGTCGGTTCCAGTCTCTTTATTCTACAGTTTACTTACACCCAAAATTTCT
GAATCTTCTTGTTTTTAGATATGTGTGTGATGCAGATTTCTATGGTCCAG
CTTGCGATCGATTTTGCGTTGCACGAAATGACGTGAATGGACATTATGAG
TGTGATCGCGCATCCGGTGAAATGATATGTTTGGATGGTTGGATGGATGC
GAAAACTAACTGCACCACTATTAGTGAGTTCAAAGTCCAAATGGATAATT
TTCTAAGTGTGCAACATATATATGCTATAAGTGGATTTAAGGTTTTAGGT
CTCTCTTAgcattattttaaagaaatgttTCTTTCATATTTGCAGGATAA
CTCTCATATTAGACGTGACATGAAAAAATTATAGTGTCTTCTCTTGCCTG
ACAACAAGAAAACATCACACGTCAGCCCTTTGGCAAGACATTTAATTAAA
TAAGTATGAATTTGTTTTCTTATCTCAGCACCAAGTTCAATGATAATTGC
CCCATCAACATCTACACCCACATTGATAACGAGTTCAACCGTAAACGTTG
ATGTATCTTCTTCAATGATGGTGCATGGGAGCATCCGTCCAACAAGGTCC
ACTAttcaaatgatgacgtcatcagttgtTTGTAATAGCACAATAACGAA
AGTTAATTTGGACCTTAAACTTCAAGGAGAGTTAAAATTGGTAAGTGAAA
CTATAAtcattgattgatttattgattgattcatAGATTAACCTGCGCAG
TCAAAACTTACCAAAAACTTCACAATAAACTTGCAAGGACGGCACATACC
CATATCAACCATATGCTGGGGGGAACCCCCGGGGTCTGTACCGATTCGGA
ACGAAGAATAGTCCgttaaaataaagattttgacaGTAACTTTGGTGTGA
TTCAGATGGATAATTCTCCATTAAggaatgtttattttttctgcAGAAAG
AATTCAATGACACGATGCAACACATAATCTGCATTGAAGTTAACAAAGCA
TGCTACAATCTGATTGGTCAATGTACAAAGACCCCATCACGTGATCAACT
CAATTTGAAggatattgaaattttggaggAGCGATTTGTTAATCAAACGT
TGAGTGATTTCAAGCTAAGAATTTCTTCAGGTAAATACCTAAAATGTAAA
GTATAGATGAAGCCTAGAGTCGAATCTCTTATGTGTAGGATTTTAAGTCT
CTTATTTCTTACATAAGTTTCCTGGCCCACATGGTTTTTGCACAAATGAT
GGATTTAAAGTAACATTTACAgttagaattttaaaattgtaagatgcgaa
aacaaagaaagttctagattcaatccgtcattattCGAAATGCGACGAGA
GTTTTAAGGTTTTACTTTCGCTTGCctatgaaaagttgaaaattcgTCTT
TAGCCTTCGGTTTGAAGCTCTTCTTTTCCCTTCAATCCGTGAGTAGGTTT
AGATCATATTAGATCAGGAACTCTAAAATGACCACCAATCCTTTTTCAGC
TACAGGAAAATGTAACGAGAACTTTGCAAAGTGTGCCCGAGAATCAATTT
ACAATTCAAAACAACTACGACACGAGCTTGGTGCTGAGAAGGTTGAGATA
TGTACGAACTCGAAAGGTTGTGAACAAAGAGCGACTCTATTGAATAATGA
CCGTAAGAAAAAGGAAGAAGGAAAAGATGAAGTGATCATTATAGCAGTTT
TATGCACCATGTTTGGCGTGGTAGCACTGACGCTTGGTTTGCTCTACCTC
AGGAAGAAGAggtaaatttaatttcttttctcTTTGTCAAGAGAGAAAGT
TTCATTGGAAATACAGATAAATGTTTAGCCATTTTAAAAGAAGCACTAAG
TctctatttaaaaaagatttgtcactttcttaatccaaaaaaatCGCATT
TCCGATGccgatcaaagattttaagGAAATTAATAATTTCTCTTAATtag
gctattccaaaaaaaacgtGAATCCCCTATGTTGAGGTggtttttttggg
aaaagtgATTCGCTtggattttttaaagttttcaggACATCATTTTATAG
ACCAGTCCCCCTGGATTTtctattttccagaccaccctggacgtcacatc
TCTTTAACAGAGAGGTtacagactatttctgaaaTAGCCCATTTGCTGGC
TAAGACGGGATTGATGACAAAAGTAATAATTTTTTCGTTTTCATATTTTC
CAGGATGATGAAGATCGGGAATCTGGAAGATCGACAAACTTCGAATAACA
ACAATGATGATGAAAAGACGAACATCGTTGATGACAAAGAAACATCCTCG
TGTTGA Coding sequence (CDS) from alignment at sc0000034_pilon:1139502..1143407+ >XLOC_040669 ID=XLOC_040669|Name=XLOC_040669|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2916bp|location=Sequence derived from alignment at sc0000034_pilon:1139502..1143407+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCTTTGGGACAATTGATTTGTTTGACCGCAATCACATTACTGGC
GCTGATAAAGATGGCGTCTTTGGGACAATTGATTTGTTTGACCGCAATCA
CATTACTGGCGCTGATAAAGCTTGCTGAGAGCTCTGGAAGGATGGAAATT
AAACTTCTGAGTTATGCTAATCAAAAACATCGAATGTCGAACGGCCGTTG
CTGTGAAGAAGGTTTAGAGAAAGATTGCAAGAGAAACAAGAACAACCGAT
GTATTGAATGTACAATGGAGTGCGACCCACAATTCAAATTCGAAATGATA
CGAAACAATGAACGAGTGATGTTTTATAACACAAGCACTTTGGAGCATaa
agataattttgatttcaaagatGTCTTGGAACCTAATATTCAAAACCCAT
TTATATTGAATCTCTCGTCGTTCAAGCTTGCTGAGAGCTCTGGAAGGATG
GAAATTAAACTTCTGAGTTATGCTAATCAAAAACATCGAATGTCGAACGG
CCGTTGCTGTGAAGAAGGTTTAGAGAAAGATTGCAAGAGAAACAAGAACA
ACCGATGTATTGAATGTACAATGGAGTGCGACCCACAATTCAAATTCGAA
ATGATACGAAACAATGAACGAGTGATGTTTTATAACACAAGCACTTTGGA
GCATaaagataattttgatttcaaagatGTCTTGGAACCTAATATTCAAA
ACCCATTTATATTGAATCTCTCGTCGTTCAAGGGCAATTTCACGTTTTCG
ATCAAATCGTTCGATCACGATGATCAGGGAATCGATCCCATCGATGAATC
GATCTTTCAGTTCAACACAAAAAGCATGGATACAAAGATACAACCGAACA
ATGAAACTGTTTATCTCTGCTCAAGCGGAATAGTTACCAAAACTAATTTC
ACTATAAGGGCAATTTCACGTTTTCGATCAAATCGTTCGATCACGATGAT
CAGGGAATCGATCCCATCGATGAATCGATCTTTCAGTTCAACACAAAAAG
CATGGATACAAAGATACAACCGAACAATGAAACTGTTTATCTCTGCTCAA
GCGGAATAGTTACCAAAACTAATTTCACTATAAGATATGTGTGTGATGCA
GATTTCTATGGTCCAGCTTGCGATCGATTTTGCGTTGCACGAAATGACGT
GAATGGACATTATGAGTGTGATCGCGCATCCGGTGAAATGATATGTTTGG
ATGGTTGGATGGATGCGAAAACTAACTGCACCACTATTAATATGTGTGTG
ATGCAGATTTCTATGGTCCAGCTTGCGATCGATTTTGCGTTGCACGAAAT
GACGTGAATGGACATTATGAGTGTGATCGCGCATCCGGTGAAATGATATG
TTTGGATGGTTGGATGGATGCGAAAACTAACTGCACCACTATTACACCAA
GTTCAATGATAATTGCCCCATCAACATCTACACCCACATTGATAACGAGT
TCAACCGTAAACGTTGATGTATCTTCTTCAATGATGGTGCATGGGAGCAT
CCGTCCAACAAGGTCCACTAttcaaatgatgacgtcatcagttgtTTGTA
ATAGCACAATAACGAAAGTTAATTTGGACCTTAAACTTCAAGGAGAGTTA
AAATTGCACCAAGTTCAATGATAATTGCCCCATCAACATCTACACCCACA
TTGATAACGAGTTCAACCGTAAACGTTGATGTATCTTCTTCAATGATGGT
GCATGGGAGCATCCGTCCAACAAGGTCCACTAttcaaatgatgacgtcat
cagttgtTTGTAATAGCACAATAACGAAAGTTAATTTGGACCTTAAACTT
CAAGGAGAGTTAAAATTGAAAGAATTCAATGACACGATGCAACACATAAT
CTGCATTGAAGTTAACAAAGCATGCTACAATCTGATTGGTCAATGTACAA
AGACCCCATCACGTGATCAACTCAATTTGAAggatattgaaattttggag
gAGCGATTTGTTAATCAAACGTTGAGTGATTTCAAGCTAAGAATTTCTTC
AGAAAGAATTCAATGACACGATGCAACACATAATCTGCATTGAAGTTAAC
AAAGCATGCTACAATCTGATTGGTCAATGTACAAAGACCCCATCACGTGA
TCAACTCAATTTGAAggatattgaaattttggaggAGCGATTTGTTAATC
AAACGTTGAGTGATTTCAAGCTAAGAATTTCTTCAGCTACAGGAAAATGT
AACGAGAACTTTGCAAAGTGTGCCCGAGAATCAATTTACAATTCAAAACA
ACTACGACACGAGCTTGGTGCTGAGAAGGTTGAGATATGTACGAACTCGA
AAGGTTGTGAACAAAGAGCGACTCTATTGAATAATGACCGTAAGAAAAAG
GAAGAAGGAAAAGATGAAGTGATCATTATAGCAGTTTTATGCACCATGTT
TGGCGTGGTAGCACTGACGCTTGGTTTGCTCTACCTCAGGAAGAAGAgCT
ACAGGAAAATGTAACGAGAACTTTGCAAAGTGTGCCCGAGAATCAATTTA
CAATTCAAAACAACTACGACACGAGCTTGGTGCTGAGAAGGTTGAGATAT
GTACGAACTCGAAAGGTTGTGAACAAAGAGCGACTCTATTGAATAATGAC
CGTAAGAAAAAGGAAGAAGGAAAAGATGAAGTGATCATTATAGCAGTTTT
ATGCACCATGTTTGGCGTGGTAGCACTGACGCTTGGTTTGCTCTACCTCA
GGAAGAAGAgGATGATGAAGATCGGGAATCTGGAAGATCGACAAACTTCG
AATAACAACAATGATGATGAAAAGACGAACATCGTTGATGACAAAGAAAC
ATCCTCGTGTTGAGATGATGAAGATCGGGAATCTGGAAGATCGACAAACT
TCGAATAACAACAATGATGATGAAAAGACGAACATCGTTGATGACAAAGA
AACATCCTCGTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000034_pilon | genome | sc0000034_pilon:1139502..1143407 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1357-1458:3805 |
| Aaloc | 1096-1353:3102 |
| Aaloc | 910-1092:2547 |
| Aaloc | 700-909:2081 |
| Aaloc | 544-696:1670 |
| Aaloc | 367-540:1214 |
| Aaloc | 61-366:533 |
| Aaloc | 1-60:1 |
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