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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000034_pilon:1011511..1016352+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040667 ID=XLOC_040667|Name=XLOC_040667|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4842bp|location=Sequence derived from alignment at sc0000034_pilon:1011511..1016352+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATGGAGACCGATTTCTTGGTTGAGGTTCAAAACGAACAAGTCAACGT
CGAACTCCAACAAGCCAACATTCGAACCGAATTACAAAGTAGTATCTCCG
GTGGTATCTCTGATGGCAAATGGCACACTCTCACATTGACCATTGAAGAT
GGGGATAAGTAAGTCTGCATTGAATTACCTCTTATTTAAGTCTGGCTAAC
AGAGAcgcgaaagaaaattctttgtacttatttttctctttcttctaTCT
GGTAATAACCTTGATGAACAATAAAATGCCTATGAGATTGACCCGGCTGA
ATATTGTTCAACATAAGGAGAAGTTTCTCAGAACACCTTCAATGGAGCAC
TCTATTGATCTTTTCTTCTCAGGATTTCGTTATACCTTGGAACAGATGAC
GGTCTTGTAAAGAGCTCCAAACCTTTACCTAAAGCTGAAGTTACACTTGA
AGGAGATATGTTTTTCGGAGGTTTAGAGGATCAGAATAATGGATTCAATG
GAAATATCCGACAAGTCTACATGTGTGGAAGGTAGGCTGCTTTATATAGC
AtggtttgttttcattcaaaaggcAAATTGATTTGTTAGGAATGATTTCC
TTGGTTTTAAATTTGAAGTTCTTTGTTTCTATATATCTACTTGGTTGAAG
AAATGAATTAGCATTATTTAGCTGCATTCATTTTCAAGTCTGCTCAACGT
CTTCAAAAGCTTTTGCTTTTTTCCACAGTGAAATGAACCTTGCACAAGAC
TTGGAGAATCTGAAAGGTGGGACACAAGTTGGAGGAAACATTTTGAACGC
CCCTCTTGCTCTCccaccacgcccaaccctgccgccaccaaccaccattc
cgccaaccacaaccacaaccaccaccaccaccaccaccaccactgCTGCT
CCTACGACAACAATAACAACATCAACTCAACCTCCTGTCTTAATCACCAC
AACTACCACTACTGCTCCACCTACCACCACTCCTGAACCAGACACCACTA
CTCCTGAGACAGTCACTACCACTCCGGAGCCAGCCACTAGCACCCCAGAG
GCTACCACCACACCTGAGGAGACCACAACTGAATTCATCGTTGGGCCAAT
TGAAGacaccaccacaacaacagcctcgaccaccaccacaactactacca
ctaccaccactcccgaggcaaccaccactcctgaaccaGCTACCACCACT
CCTGAACCAGCTACCACTACCCCTGAACCAGCTACCACTACTCCGGAACC
AGCAACCACAACTCTTGAACCAGCCACTACCACTCCAGAACCTGAAACCA
CTACTCCGGAGCctaccacgactaccaccacgacaacaactactactaca
accaccaccaccaccaccaccaccccAGCTCCTACCACGACTGCAGCTCC
TCAATGCTCCAGCAAATTGGTGCCTGTTGCCAATGCTTATGGTTTTGGTT
TCGAAGATGAAAGCTACATCGAGTTTGGAGTGATGAAAGGAAAACTAGAT
ACCAAGTAAGCTTCATCTTCAAAATGTCTGTTTGTCTAGATGAGTGAGAA
AATGAAACACAAAAAATGTTACTTTTAGTAATTTAAATTAAGGTTTAGTT
CAAAACAATCAAGTGGCGATAGTGGGTTTTACCTTATAGGAATCAATGAC
AACGCAAACTCGTTAAAAGAACTCTATGTAAACGTCTCTAGGTTTTCCAG
TACGACCCCGTAGTTTTTGCTCATAATAGCAAGGAAAGACTACACTTTTA
TGAACAGACTTTAGGTATTTCTAGATTATTCAACACGGCTCTTTTCTTTC
ATTCATTCAACACGGCTCCTTTCTTTCATTCAACAGGGCGGATTacgaat
tctcattttacacaaTGGAAGAAGAAGGTTTATTGATGTCAGGTTTTATG
AAGAGTCCTTACGATTACGAAGCTATCTATTTAGCTGGTGGAAAAGCCCA
CTACATTTTCAATGCTGGTGCAGGCTCCTTGACTTTGTCATCCAAGAGTA
CCGTCAATGATGGAAAATGGCATACTATCAAAGCGACACGTTCTAAGAGA
GCTGGTTAGTTTTATACTTTCGATATTttcgagtttatgtatttgcactt
tttagGACGGCGGAGTGAAAGAAGCGATTTGATATAACACGCAGTTTTGA
TATGCAAAAATTGAAGAGGGTAAAAGTGCTTTTTTACCGTTGTCTTCATT
TGATCCAGAGGACTGTAAAGAGatgaaaaaaaagcttttctgattactca
aagttcaacgatcacttcttttgaaaattctattgtaaaaacgttgatta
ggtcattaaacgaaagtccagaaaaggaggctcgccatacaaatcggacg
gtttctataTGGTTAGACgataaatatgaaaatttgtttttcctttttcg
ccgattactagttcaatctTAAAGAACAAGgaacaatttttttaccaatg
tatagcaaaagaaattcttaacgcaatgatattaaattgattcttgtaaa
actgtcagaaatcagtaaaatcaagatgaagttataattttgcTCGAGCT
CTAGATTTCCATACAATTGTGtgtgatgcggttatatcagtggaatcgct
aggaaattcttagcaagaagatataggtaccttttctaataggagaggtg
tacccaaaatataagtcctaaaagtttgcgcatcatcaggcttgaaacaa
aagaattttgtcacaacacgctaattatgcagatttttcatagcgacaac
aaaagaaacctattaactcgacataaactcccttaatggcaagagacctg
gtatacggcgagccgtttttccattgttttcaagacactgtttttccatc
tctttacatttcTCTGTTTGATTAGGATCTAGACTAAATAGAAGCTAACC
GTCTTCGTTCCAGAACAacacaaatacataaactcgataTTACCACTGAT
AATATACCACTTACCAATGTTTTGGGAATACTTGATATCGAATAATAATC
TGGCTGAAAAGAGTATAAAAATTACAGCATTTACATTTTCCATCATTTCA
GGAACGTTGTACGTTGATGGAGATATTGCAGCTGTCGGTGAATCAAAACC
AGGAGCATCTGCTGTCAACAACATTAACAAAGTCTACTTTGGTGGATTGC
CCTCCACTTCGCTTGTCATCCCTAAAACTCCGGTAAGTTCCGAATCGTCA
ACTTTTAGTTTTAAACATTCATACCAGCGAAATCATTCCAAGATTTCCAT
TATCCAACGACCTCCATTACATCATATTAGAAGCGTTAAATTGTCTTGTA
GGGGTTTCAATCAGTTTGCAATGAATCATAGGAATGAGCTCTAACAATAG
CTCCCGGTTCACCAGACATTATAAAAGTCTATTGGACGTGCGGTGTTCCT
GGCTTCCCACAATGCATTGGAGCAGTGAAGCAGCTTATGTCTACCACATT
ATCGAAATTCGAAAAATCCCTTAACAAGATATATTGGTTGTCAATGTCAA
TTAACTTTTGTGTCGTGCAAAAATTAACGAATCTCTTTTTTCTTGTCCAC
AGAAAACATCTCAAATTCCACTGAAAGGAGGAATGAAGGACTTTAAACTT
TTCAACGAAGCTCTGGTCACGCCTGCTGCTAGTGTTGGAACGTCACCAGC
GTACAACGGATTGCCATATGTTAACGCTGTCTCCTTTGGTGCCAATGGTG
GATTTGCCCAGAAATTCAGTAAGTTTGAATTTATTTACAATATACTCTTG
AAAGTACTCGATATGTTTAGAAACTCAACAATAGGGGGTATACTCTTTTT
GTCCGCTTAAGACGTTTTCTGTTTTAGACAACAAATCTTTAGAAAACCTC
CTCGAAAATCATTCTTCTATCGCCTTTTAGTTCGATTAATTCATTGTTTT
ATCCCTCATAATATCATTTACTCTCCATTCttgaagttttgaaataattt
gcATCTTTCTTATCAGAGCAATTGAAAATCGGACAAAATTTCAAGATCTC
ATTCGACGTCCGTGCGGCTAACAAAGCCGGCTCCCTCTTTTACGTGTACG
GAGGAGGTGATCATTTGTCCGTCACCGTCGAAGAAAACGGTTCCATCAAG
GTGACGTGTAACAACGGTGGAGGGTTGTTCTCCGTGGCGTACAAACCGGA
ACCTTCCGTTTGCAACGGTGATATTTACAGCGTGCTTGtggagaagaaaa
tgaaaacattaaaattgACAGTCAATGGTGCCGTGACCGAAGAAACGACC
ACCAAATCAAGCACGTCTGCTGACACCAACTCGCCCGCTTACTTTGGTGG
ACTTCCAGACAATTTGAGATCAAACTGGTCCAAGATTTCTGACAGTAAGT
TTTTCAGACCCTTCATAAAATTTGTCTTCTCCGTTCGTAACGTCCCTTCT
ACTAGATGATGCTATCGTCTGTTACAaggatagtaaaggcgggaagaTGT
GAATGCGCAGACTTTACAGCCATTTctgcggtatacggaaaaagtCGGCG
CTAGAGCTTCGAAGAAAGACAGTCAAACTCTAGCGGCTGTAAACTattta
tggcaaaaaaaaacatatatttgtgaattttcttcgactttgagcttatt
tcttagatagtgatttgtcttagactatagcatagccTACCCTCCTACTA
TCTTCCTATCTGCCTTGTTTTAAAACAGAAACTTGATTCATTTTCTCAAC
CTATATCCTTGCTTCATTCTTAGGCAAAGACTACAAGCCCTTCGAAGGTT
GTATCAGCAAAGTGGAAATTAATGACGAAGCTATCGACTTCacaagtgac
gtcatcaaaaatggcGCCGTCATGACGGGATGTCCTGAATGA Coding sequence (CDS) from alignment at sc0000034_pilon:1011511..1016352+ >XLOC_040667 ID=XLOC_040667|Name=XLOC_040667|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4212bp|location=Sequence derived from alignment at sc0000034_pilon:1011511..1016352+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATGGAGACCGATTTCTTGGTTGAGGTTCAAAACGAACAAGTCAACGT
CGAACTCCAACAAGCCAACATTCGAACCGAATTACAAAGTAGTATCTCCG
GTGGTATCTCTGATGGCAAATGGCACACTCTCACATTGACCATTGAAGAT
GGGGATAACAGATGGAGACCGATTTCTTGGTTGAGGTTCAAAACGAACAA
GTCAACGTCGAACTCCAACAAGCCAACATTCGAACCGAATTACAAAGTAG
TATCTCCGGTGGTATCTCTGATGGCAAATGGCACACTCTCACATTGACCA
TTGAAGATGGGGATAAGATTTCGTTATACCTTGGAACAGATGACGGTCTT
GTAAAGAGCTCCAAACCTTTACCTAAAGCTGAAGTTACACTTGAAGGAGA
TATGTTTTTCGGAGGTTTAGAGGATCAGAATAATGGATTCAATGGAAATA
TCCGACAAGTCTACATGTGTGGAAGGATTTCGTTATACCTTGGAACAGAT
GACGGTCTTGTAAAGAGCTCCAAACCTTTACCTAAAGCTGAAGTTACACT
TGAAGGAGATATGTTTTTCGGAGGTTTAGAGGATCAGAATAATGGATTCA
ATGGAAATATCCGACAAGTCTACATGTGTGGAAGTGAAATGAACCTTGCA
CAAGACTTGGAGAATCTGAAAGGTGGGACACAAGTTGGAGGAAACATTTT
GAACGCCCCTCTTGCTCTCccaccacgcccaaccctgccgccaccaacca
ccattccgccaaccacaaccacaaccaccaccaccaccaccaccaccact
gCTGCTCCTACGACAACAATAACAACATCAACTCAACCTCCTGTCTTAAT
CACCACAACTACCACTACTGCTCCACCTACCACCACTCCTGAACCAGACA
CCACTACTCCTGAGACAGTCACTACCACTCCGGAGCCAGCCACTAGCACC
CCAGAGGCTACCACCACACCTGAGGAGACCACAACTGAATTCATCGTTGG
GCCAATTGAAGacaccaccacaacaacagcctcgaccaccaccacaacta
ctaccactaccaccactcccgaggcaaccaccactcctgaaccaGCTACC
ACCACTCCTGAACCAGCTACCACTACCCCTGAACCAGCTACCACTACTCC
GGAACCAGCAACCACAACTCTTGAACCAGCCACTACCACTCCAGAACCTG
AAACCACTACTCCGGAGCctaccacgactaccaccacgacaacaactact
actacaaccaccaccaccaccaccaccaccccAGCTCCTACCACGACTGC
AGCTCCTCAATGCTCCAGCAAATTGGTGCCTGTTGCCAATGCTTATGGTT
TTGGTTTCGAAGATGAAAGCTACATCGAGTTTGGAGTGATGAAAGGAAAA
CTAGATACCAATGAAATGAACCTTGCACAAGACTTGGAGAATCTGAAAGG
TGGGACACAAGTTGGAGGAAACATTTTGAACGCCCCTCTTGCTCTCccac
cacgcccaaccctgccgccaccaaccaccattccgccaaccacaaccaca
accaccaccaccaccaccaccaccactgCTGCTCCTACGACAACAATAAC
AACATCAACTCAACCTCCTGTCTTAATCACCACAACTACCACTACTGCTC
CACCTACCACCACTCCTGAACCAGACACCACTACTCCTGAGACAGTCACT
ACCACTCCGGAGCCAGCCACTAGCACCCCAGAGGCTACCACCACACCTGA
GGAGACCACAACTGAATTCATCGTTGGGCCAATTGAAGacaccaccacaa
caacagcctcgaccaccaccacaactactaccactaccaccactcccgag
gcaaccaccactcctgaaccaGCTACCACCACTCCTGAACCAGCTACCAC
TACCCCTGAACCAGCTACCACTACTCCGGAACCAGCAACCACAACTCTTG
AACCAGCCACTACCACTCCAGAACCTGAAACCACTACTCCGGAGCctacc
acgactaccaccacgacaacaactactactacaaccaccaccaccaccac
caccaccccAGCTCCTACCACGACTGCAGCTCCTCAATGCTCCAGCAAAT
TGGTGCCTGTTGCCAATGCTTATGGTTTTGGTTTCGAAGATGAAAGCTAC
ATCGAGTTTGGAGTGATGAAAGGAAAACTAGATACCAAGGCGGATTacga
attctcattttacacaaTGGAAGAAGAAGGTTTATTGATGTCAGGTTTTA
TGAAGAGTCCTTACGATTACGAAGCTATCTATTTAGCTGGTGGAAAAGCC
CACTACATTTTCAATGCTGGTGCAGGCTCCTTGACTTTGTCATCCAAGAG
TACCGTCAATGATGGAAAATGGCATACTATCAAAGCGACACGTTCTAAGA
GAGCTGGGCGGATTacgaattctcattttacacaaTGGAAGAAGAAGGTT
TATTGATGTCAGGTTTTATGAAGAGTCCTTACGATTACGAAGCTATCTAT
TTAGCTGGTGGAAAAGCCCACTACATTTTCAATGCTGGTGCAGGCTCCTT
GACTTTGTCATCCAAGAGTACCGTCAATGATGGAAAATGGCATACTATCA
AAGCGACACGTTCTAAGAGAGCTGGAACGTTGTACGTTGATGGAGATATT
GCAGCTGTCGGTGAATCAAAACCAGGAGCATCTGCTGTCAACAACATTAA
CAAAGTCTACTTTGGTGGATTGCCCTCCACTTCGCTTGTCATCCCTAAAA
CTCCGGAACGTTGTACGTTGATGGAGATATTGCAGCTGTCGGTGAATCAA
AACCAGGAGCATCTGCTGTCAACAACATTAACAAAGTCTACTTTGGTGGA
TTGCCCTCCACTTCGCTTGTCATCCCTAAAACTCCGAAAACATCTCAAAT
TCCACTGAAAGGAGGAATGAAGGACTTTAAACTTTTCAACGAAGCTCTGG
TCACGCCTGCTGCTAGTGTTGGAACGTCACCAGCGTACAACGGATTGCCA
TATGTTAACGCTGTCTCCTTTGGTGCCAATGGTGGATTTGCCCAGAAATT
CAAAAACATCTCAAATTCCACTGAAAGGAGGAATGAAGGACTTTAAACTT
TTCAACGAAGCTCTGGTCACGCCTGCTGCTAGTGTTGGAACGTCACCAGC
GTACAACGGATTGCCATATGTTAACGCTGTCTCCTTTGGTGCCAATGGTG
GATTTGCCCAGAAATTCAAGCAATTGAAAATCGGACAAAATTTCAAGATC
TCATTCGACGTCCGTGCGGCTAACAAAGCCGGCTCCCTCTTTTACGTGTA
CGGAGGAGGTGATCATTTGTCCGTCACCGTCGAAGAAAACGGTTCCATCA
AGGTGACGTGTAACAACGGTGGAGGGTTGTTCTCCGTGGCGTACAAACCG
GAACCTTCCGTTTGCAACGGTGATATTTACAGCGTGCTTGtggagaagaa
aatgaaaacattaaaattgACAGTCAATGGTGCCGTGACCGAAGAAACGA
CCACCAAATCAAGCACGTCTGCTGACACCAACTCGCCCGCTTACTTTGGT
GGACTTCCAGACAATTTGAGATCAAACTGGTCCAAGATTTCTGACAAGCA
ATTGAAAATCGGACAAAATTTCAAGATCTCATTCGACGTCCGTGCGGCTA
ACAAAGCCGGCTCCCTCTTTTACGTGTACGGAGGAGGTGATCATTTGTCC
GTCACCGTCGAAGAAAACGGTTCCATCAAGGTGACGTGTAACAACGGTGG
AGGGTTGTTCTCCGTGGCGTACAAACCGGAACCTTCCGTTTGCAACGGTG
ATATTTACAGCGTGCTTGtggagaagaaaatgaaaacattaaaattgACA
GTCAATGGTGCCGTGACCGAAGAAACGACCACCAAATCAAGCACGTCTGC
TGACACCAACTCGCCCGCTTACTTTGGTGGACTTCCAGACAATTTGAGAT
CAAACTGGTCCAAGATTTCTGACAGCAAAGACTACAAGCCCTTCGAAGGT
TGTATCAGCAAAGTGGAAATTAATGACGAAGCTATCGACTTCacaagtga
cgtcatcaaaaatggcGCCGTCATGACGGGATGTCCTGAATGAGCAAAGA
CTACAAGCCCTTCGAAGGTTGTATCAGCAAAGTGGAAATTAATGACGAAG
CTATCGACTTCacaagtgacgtcatcaaaaatggcGCCGTCATGACGGGA
TGTCCTGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000034_pilon | genome | sc0000034_pilon:1011511..1016352 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2017-2133:4726 |
| Aaloc | 1639-2013:3969 |
| Aaloc | 1471-1635:3553 |
| Aaloc | 1342-1470:3054 |
| Aaloc | 1123-1338:1838 |
| Aaloc | 964-1119:1348 |
| Aaloc | 925-951:1321 |
| Aaloc | 319-909:730 |
| Aaloc | 160-315:374 |
| Aaloc | 1-156:1 |
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