XLOC_040638 (mRNA) -

Overview
NameXLOC_040638
Unique NameXLOC_040638
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000041_pilon:827705..828718-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040638 ID=XLOC_040638|Name=XLOC_040638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1014bp|location=Sequence derived from alignment at sc0000041_pilon:827705..828718- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTACCGACAGGTCGCCCACCGGTGGGATTCAAACCCACTTAAATG CAAAGTTCCGATGTTTTGAAACCCAATGCCTTATCCACTGCACCACGGAT TCATGCTGGGAAAGTGTTTCTGACGGCTATTTATATTGTACAAACTGCAG ACCAGACTGTATTAAGAGAAAATCACAACAGAGTGCTTGTTTCGAGCTCC AACTCTAACCCTAACTGACAGTTACATCAATATGCCAAAAACATTTTGTT CAACCATCTTCACTTCAAGATAGACCACCATAGAATGAACTTTTCCTTTT ATAGGATGAACCATTATTCATGTGGCTTTCAGCTTTGCACTCCATCACAG AGCCTATTTGAGATATTTTACTAACTAACCCAGAGAAAAATTTTAAACCT TTATTATTTGAATGCATGCCTTTTTAATACTCAAATATAAAGAAATTAAA AAATTGTAACTTGGTCATTATAGTCAAAAAAGTCATTAAAATTGATTAGC CTCTGCGATGGAGTGCAAGGCTGAAAGCCACATGAATATGGTTCATGCAT CCTATAAAAGGAAGTTCATTCTATGGTTTATCTACTAAAGTCTGGTTTAG TTCATACCTGTCCGATAGATCCCGGTTTGTTTCAATTTCAGGAATAAAAT CAAACTTAAAACCTATTAAACATGGTGTCCCCCAGGGTTGTTCTCGGACC CCTGCTTTTTCTTATATATATCAATGATCTCCATCATTGCATTAGAACTT CTGAGACCTATCATTTTGCTGATGACACACACCTCCTTAAATCTTTCCCA AACCGTTTGGTCTCTCTGTGGTAGAGTAAACTCTGACCTCAGAGTTCTCG TCAGCTGGCTCAATGCAAACAAAATATCTCTAAATGCCAGCAAGACAGAA TATATTATCTTTAGGTCGAACAGGCGTCCCCTTGACACTATTCCAAGGAT AGTCTCAGGTCAACGCCTCACTCCAAGCAAAACCATAAAATACCTAGGTG TCCATCTGGACTAA

Coding sequence (CDS) from alignment at sc0000041_pilon:827705..828718-

>XLOC_040638 ID=XLOC_040638|Name=XLOC_040638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=626bp|location=Sequence derived from alignment at sc0000041_pilon:827705..828718- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTACCGACAGGTCGCCCACCGGTGGGATTCAAACCCACTTAAATG
CAAAGTTCCGATGACTTACCGACAGGTCGCCCACCGGTGGGATTCAAACC
CACTTAAATGCAAAGTTCCGCATTTTGCTGATGACACACACCTCCTTAAA
TCTTTCCCAAACCGTTTGGTCTCTCTGTGGTAGAGTAAACTCTGACCTCA
GAGTTCTCGTCAGCTGGCTCAATGCAAACAAAATATCTCTAAATGCCAGC
AAGACAGAATATATTATCTTTAGGTCGAACAGGCGTCCCCTTGACACTAT
TCCAAGGATAGTCTCAGGTCAACGCCTCACTCCAAGCAAAACCATAAAAT
ACCTAGGTGTCCATCTGGACTAACATTTTGCTGATGACACACACCTCCTT
AAATCTTTCCCAAACCGTTTGGTCTCTCTGTGGTAGAGTAAACTCTGACC
TCAGAGTTCTCGTCAGCTGGCTCAATGCAAACAAAATATCTCTAAATGCC
AGCAAGACAGAATATATTATCTTTAGGTCGAACAGGCGTCCCCTTGACAC
TATTCCAAGGATAGTCTCAGGTCAACGCCTCACTCCAAGCAAAACCATAA
AATACCTAGGTGTCCATCTGGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040638XLOC_040638-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041_pilongenomesc0000041_pilon:827705..828718 -
Properties
Property NameValue
Aaloc85-312:229
Aaloc61-84:254
Aaloc1-60:1015