XLOC_040614 (mRNA) -

Overview
NameXLOC_040614
Unique NameXLOC_040614
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000041_pilon:664211..671721-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040614 ID=XLOC_040614|Name=XLOC_040614|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7511bp|location=Sequence derived from alignment at sc0000041_pilon:664211..671721- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCTTTTGGAAGAAGTAAGAGAGCATGATACAAACAAACAATGGAA CCCAATGTTTCAAGTAAGTCAATACATCGCTATGTGGCACAATAATAAGT TCCTCCTATTGTATGTATAAAGCATAGTGTGCAAGGGGGTTGCAGGTCCC ACCTGAAAATTCAGGTCCCACCTTATCCTAAAGTTCCCACCTTCAGCCCA GACTCCCAGATCCCAGCTAAAAACAAAAAAATATATACTAATTCGAGGAA CAAAACAAAATTTCTTTACCGTAATATGAAGATGCAATATATTACATATG TTTAACGTTCCATTTGCCTATGACCTACATTAGGGGTAGAAACCAATCAA GTAGTCAGACGGCTTAGAAGTAAGTGTGAGTCGTTAGATATAAGTTTGGC ATGAAATTATGGCTAATCCTCGAATAAGAAGTTTTGGGGAAAATTTGTCC CGATAACTACAATATTAGTATAAATAAGTGAGGATCGCCTACAACCATAA CTGCAGGGAGGGAGGGAGGTAAAATATTTCATCCTGTCAGCTTTCAGTTA GAGCGTCGCCTTTAACAGGGAGATGTGATGGCCATTTTGAACATGATGTC ACATGGCTATTAGCAAAGTAGACTCAGTAGACTCAGTTGCCATTCGAATA CTGTATATAGCGCTTATCAAATAAAAGTTAAGCCGCAATTTAACCTGTGT GTTAAATCCAAAATATATTATGTCTATTATATACATTTATGAAGTATATA AAAAAATATATCATAAAATCATAAAAACTGAAAATAAGAAATTTTACTTT AACTTTTTCCAAAACACCCAAAGTCCCACCTAAAGAAATTAACTCCCACC TTAACTTGTTTCTCCCACCTTAAACCTGGAAAACCCCAAATCCCACCTGA AAATTTTCGACCCAAATCAGCAAAACCCCCCCCCCCCCCACTATTCTGGG GGGGGGTGCACACTATGTAAAGGCTTTTCATTTTTCTGATTAATTTATTT ACTGTTTGCTCATTGATTTTTGATTCATGAAGTCTTTTATTTTTGTTGTC AAAAATTTTCATCCCTCTCTAGGTCAAGCAATATGGGTTAGTTAAAAAAA AGTTTTTTAGCTAAAATATGGCTGTGTAGATGTCATTCTTTGAATAGTTA AGCTGTAAGTAAAAAGGACGATACCCTTATAATATAACCTACTAAGTATC CTCCTCCCACCTTTTTATAGTTAAAGTAGTATTTCTAAATTTCAATCCCT TGCAAAAATGTTTTTGAATATTTTTACCATATAGATGATGCATTTGGAGA CAAGTCAGCAAATTGAACACAAAACATTGAAAGCAGCCAAAGCCCCACAA AACCGTTCACTCAATCGATATAGAGATGTTTTACCATGTAAGTTTATCAT CTTAATACATATCAATGAGAAAATAATGATATAGTGCGAGATGGGCTTTT AAGATAACCCTCAGTTATCATAACATTGAATAAGCCTCCCTAACATAAAT TTCAGTGCAATAATTTTAAAGGGCATTAGAACCCACTGACAGGCAAAGAA GACACCTCTCCCAGTGGTCTGCCTTTCTTATTCAGATTAACCTGCGTCGG CAAAAATTCTGGGTTCTATAGTACAGTAAGCACTTTTATGTCGGCAAAAG CCAAATTTACATCAGCATTTGCGTCGACATAGCCAAATGCCGACACGAAT TAGAATGGCTGGTGGTAGTCGCCTCAAAGAGGCAGTTTTGAAGTTGGAAA TGGTCAGATATAACCACAAGCTAATAGAAAAAAAACGGTCCACCACATTT CTTTTGCTTTCAGACGATGACACAAGAGTACATCTAAAAACAGGAAACAC TGACTATATCAATGCTAATTATGTTGAGGTATATTTATTTATTGGATAAT AATTAGATATCCAGATTAAATTCTGATTCTACATTTTAGATAAAAATGAA ATGAACTGAAATAACAACATCACTGGATATTCTAAGAATACTAGAGAAAG CTCCCTAATGTTGCATTTACTTTTTATTAGGATGTGTTTCATGGGCAATC ATGACTATTCCTGAACCTTCATGAACATTTTTGAATGTTTCAAAGCGATG CTTCGATTGAGTTAATTTTAACTTTTGAACTCAAAGGATCATTTTGTGAG CATTCAATGTTCTGGAACGTTCCTGACGTTAGTAACTACAAAGGGGGACA GTTCAAGACGGTTTGGGAAGCACAAAAACATTCCTTTTCATTCATTTGTA TTTGAATTCTGTTCTAGATTTGATTTGATTCTAGACCCAACCAACCAATA AAATCTTCTTTCAATTTAGGTTTCAGACGTTGACAGAAAATACATTTTGG CACAGGTTAGGATCCTTCAAGTTTTTTGGTATTATCATTATCTTTTAAAA AGCAAAAAGGCATTTTGTCATACGGGTAGTTATTTTTACTGATTGGGAGA ACTTTGAATAATACTTAATTTTCTAAACTTTTTAAAAATTTGAAGACAAG TAATTGATACATCTTGTCACCTTCCTTGCTTAATATCTCATTTTAAGGGT CCACTTCAAAATACATCTGGGGATTTTTGGCGGATGATTTGGGAAAATGA TAGTACATCAGTCATCATGCTTTGTCGTATTGTTGAGAAGCAAATGGTTT GTATGACATGTCTTCTTTTTATCGTTGAAATAATATTTGACTCTCTCCTC AAAAAGAATACTTTCCAGGCAAAATTCCTAGCATTTTAGTCACTAGCCGT TTTTTGGATTAAAACTTAAGTTTTGACCAACTGAGTAACCACCATAAGTG GTCGATGCCTGTCAAAGGCCCTCGAAACTTGTTAGGGAAGTCCCTTAACC TTTCATGAAACATTTATTTTCAAGGAATTTTAGGGGGGGTTGTACTTTTA CGGTGTGACGGGATTGGCCCTTTTTTAGTACGGTATTACGGGATTTGACG AAAAAAGAGACGGGAAAACGGTATTTTAAAATCAGACGGTGACGGTATTT AGGTACATTTTTGCCCTGTACAAGCCGGTGTGACGGTGTTATTATTTTTT CAATTTTCGGGATTCCGGGATTCAGCAAAAATTTTGACGGGAAAATGGTA TTTCGAACCCCTACAAACCCCCCCCCCCATTTTAATCATAAAGAGAAAAT AATTCTGACATTTTTCACCATCTACATATTATTTCCAACATTTTTTGTGA TATATAAATGGAATTTTTCAAATATTGATTTTCAAAAAAGTGCTCAGAAT TTTCACCGCTTTCCTAAATCAATTCTAAGGGGATTCTAATTAACAATTCA TAGCGTCAGACTTTACAATAATGTCAACAAAAAGTTGAACTTATTAATGT TTTTTTTTCTACAGATAAAATGTCATCCATATTGGCCAATGGGTGAGGAT GAAGTTGTAGAATTTGGAAGCTTCCAAATTCAAAATGTACAGACGGTCAT GAAACAACACTATGTCATCAGAGATTTACAATTGACTTATGTCTTGGTAA CAGAATTAGATATCTTCTATTTTCATTCGATTCATATTGTGATCATTATT ATAGCAGATTATAAAATAAGGAACTGTACCCATTATGGTTTCTTTTATTT TTTTAAATAGCATTTAAAGTGGATTAAAATGTTATGCCTAAGTCTCCTGC CATTACGGACATTGTTATCTATCTAATGAAACTTTCTAAAATTTTCCTGC GTGAATTTTTATACAAATTGCTAATCCTTGTCTTGGGTTTTACTTAGAAG ATCTGCCAAAATCCTTCAGCCTTATTCTCGAAAAAAAGAAAGGTTTTTTA AATTTTGATTCTGTGAAACTCCCATCAATGATCTTAGAAGATTTCCAGAA TAAAGCTGGAGGATTTTGGCTGATTTTCTAAGTATAAGTCATACAAAAGG ATAAGCAATTTGTATAGAAATTCACACAGGAAAGTTTTAAAAAGTTTTAT GAGATAGATATTAGAAGCTTATTCTTTCCCTATTTATAGACGGGAGAAAC GAAATCAATAAAGCAATACCATTTTATGACTTGGCCCGATTTTGGTGTAC CAGATGATGCAAATTCGTTTGTTGAGTTTCTCAATACGTTAAGAAGGGAT GATGTTTTTCAAAATCAAAGACCACCTGTTATACATTGCAGGTAAACCTT CAGAATCGTCCCCCGTTAGTGGCGGGGGAGTTTAGTGTGTATCGCTCTCA ACTCCCTGCTGAACGTAGATTTTGTTTGGATGACCAGAGAAACATTAAGA GACTGTTAAGCCCTCAGACGAGAGCATCAGCACTTATTTAGACAAGAAGC CGAAACGACACGAAGGCCCAGCAACATAGCAATAAGTCGAATGTTTGCTC ACACGTACATTCTGTGCTTATTTTTAAAAGGTGTCGTCTTTCCCAAAATA TTAACTTATTAAACTGTAAAATGACTATCTGTTCTCTCAAACTGCTTATT CCTCTTTCAGTGCTGGTATTGGACGTTCAGGAACGTTAATTTTAGTGGAT GCTGCCCTTAAACTTGTAAGAACATCTTTATCCCTTTTGTTCGAAAGAGA TGTTTTATACAACAGTAATATGAAAATAATTTTTTCGTTGTTTCACCTTG ACAATGTTTAGTATGACAATCAAAACGCTCTTAATAACCCTATTCATACC AGGCTTTTAGGGATGGTTCAAAACTAGGGAGGCTGATGACGTCACTCATC ATGCCAAAAGTTAGCAAAAATCGAAAATTTCCTTTGTTCCTTCTTGTTCT TTTGTTTTCTAACAAAAAGGCTTTAGAAAAAAGTACCCTTAGTCTAAAAT TGGAAATGTGTCAATTTTTGTGATACCTTTTACTGTCAGAAATGTCATCA TGTTCAATGTGTAGAAATCATTTAGGTATCAAATTTTTTTATTTGAAGCA AAAAAAAGTTACGAATTTACAGAAAATATCATACTAAAAGGTCAATTATT TAAGAAGTGATTAACATTCATAAGTTTCACCGTCGAACAGAAACAGCCCC CCCCCCTAGTACACATAGGGTTAATATGATATTCTTAAAATTTTCCGTCA ATTAATTTCAAATTGAATTGTCTAACCTAAGTTTTGCTTTGTTCATCTTG AAAGCTCTAGTTGAACAATTTTCTACCAATTTCAATCATCAACAAGGGTG GAAATTCCGCTGTCTAAGATAGGGCTAAGTCTTTCTTTCTTTGGTTTAGT GTGAGGATAAGAACAGTCCAAATTCGTTAGACGTGAGAAAGATGTTGCTA GCATTGCGTCAATTTCGTTGTGGCTTGGTTCAAACACCTCAACAGTTCCG ATTCGCTCACTTGGCAATATTGACAGGTCTCCATGATAAGTTCCCCTCAC TGTTCAGTGATGTTCCCAAAGAAATTGGTAAGAAAAAGTGTAATTCTGTT AATAGGCCTTATTGAATGAGAGCTAGGAATGGATCCTTTGTGATGCCATA TTATAGAAAGTTTCTTTAACACATTTCAGTGAAAATCTATTTATCCTGGC CTTAAAAACTATCCATTCTTCGACACAGCAAACTTTTGAGCTGATTGTCT AAAGCAAAGCAATGTAACCAAAATTAAAAGTTGATCTTTTAACAAAAAAC TTAAATATTAAAACTAAATATTTTGGTTTAAAGCAGATTATCACATTGAC CGTCCCTAGTGGAGAAGGAGAGTGGTGTTTTCAAGATGATCTGTTTATGA GATTGACCTTTTGTAGGGTGGATTATCTCAAAATAAACATGCTAATGCTG CAAATTGTTCTTTTGCTCTGATATTTTGCATACTATTGTTGTATTAAATT TAAAAACTTTTGGCCGAGAGAGACACAATTAAAAGGCCCTGCTGGTTTTC ACTTATTGTCTACTTTTGTATAGAAAGATATAATTTTCCTTTCTTTCTTA GAAGAGGGTGATGAGGATGAGGCAGAGCCACCAGCCTTACCAGAAAAATC GAAACATAACAAAGTACCGCCCAAAAAACCACCACGTGCCTCACACGCCA CCAACACGCCCACCCCTGAGGATGACGTCCGCAAATATAATCAAATCACG GGTAACTTTTCGATTCTTTTAATCTTACCAGCTCTACTTAGAGTCAAAAG AGTTCAACTAAAAGTTATGTGATAGCCGTCGCAGTTGTGTATTCAAAACA ATCTTTACTTCGATAAGCTTATTCGCGTTTTATTCAGCTTGATCTTCCTT ATTTCGAAAAATTAGATCATCATTGGTTGCTTTCAAACTTTGAAAAACCC CACATTTGACCGTTATTTTGACCGTTATAACTGTAGTGTATTCAGTTTTA GCGGTTTTAGAAATCTGAATCTAGTTCGCTACTTGCTTTCACTTCTGGTC GACCAGGGTCGACGTTTTGAAATTGAAAGGCTCGGAAAAATGTTGTAAAA TAGAAAACAAAATGGCGTACTAGTTGGCTCTAAAACTGTGGTCACACTTT CACGCGATATCTGTAAACAAGTTAGACTATCCTAAATGTGTAAAAGAAAA CGATAACCTGTAAAATTCGACACAATAGATTTAGAATCATCTGATGGTAG TGGTGAAGATGAAGTGATCGATCTTTCTGAAGTTTCTGACGACAATGAGG AGGACGAAGACACTATACCAGATTCACCAATAGATTCCCAAGAACAACCA CAACAAAGCAATGGTGTGGTTGAATCCAATGGAGATGAAGAAGATTACCA GGAATTGGATTTGACAGGTAAAGATTCAGAGGAGGATGATAACGAAGTCT ACCAAGAGTTAGATTTGACCAAAGTTGATCAGAACAATACTGGTAAGACA GATACATCAGAATCACAATCTAATATGGAAAAAGATGATAAAGTGGCTGA TTTACCAGAATCTTCAACTACTGCGCCAACCACCACTGATAAAGATTCAC CCTTACCTGAACCACCAACTCAACAGAAATCTAAGATTTCGACAGCTGCT GGATCCAAGGCAAGGTATTTACTTTATTGTTTCATCTTCTCTTTTTTCCC GAGCAAAGATCTGAAAATTGTTTACCTATGTATATATTTGTATGCATTCC TAGATCTGTCTGTCTATTCTTCTTTTTGAAATATTTTAAACGAATTTATC ATTGAAAGATTTATTTCCAATTTGATATGATTCTGATACAAGAATTGTTT ACTTACAAATTGTTATCAGTTGAATTACATGCTAGGCAATTCGATCTGCC TAGCCAGGGTGCAATATGCAGTCCTGACGAGTCCTAATAAGGACGAAATG CGTATGTTGCTCTGCCACCCAAATCTCCTTCTTCACACATATAATTTTAT TTTCTACAGAGAAAACGAGTTGCGGCAGAGGGAGAGGAGCGAGAAGAAAG AAGCCACACAAGAACTCATAAACAACATAAAACAGCGGATGAAGGATAGC GAGAACAAGGCGAAGAAGGGAGCTTTTGAGAACAATACAATGCTACTATA TGTCGGTGTCGCTATTGTCGTCACCTCTTGTGTCGTCTTGGCATACAAAT GGTTAAGTTGA

Coding sequence (CDS) from alignment at sc0000041_pilon:664211..671721-

>XLOC_040614 ID=XLOC_040614|Name=XLOC_040614|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3342bp|location=Sequence derived from alignment at sc0000041_pilon:664211..671721- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCTTTTGGAAGAAGTAAGAGAGCATGATACAAACAAACAATGGAA
CCCAATGTTTCAAATGTTTCTTTTGGAAGAAGTAAGAGAGCATGATACAA
ACAAACAATGGAACCCAATGTTTCAAATGATGCATTTGGAGACAAGTCAG
CAAATTGAACACAAAACATTGAAAGCAGCCAAAGCCCCACAAAACCGTTC
ACTCAATCGATATAGAGATGTTTTACCATATGATGCATTTGGAGACAAGT
CAGCAAATTGAACACAAAACATTGAAAGCAGCCAAAGCCCCACAAAACCG
TTCACTCAATCGATATAGAGATGTTTTACCATACGATGACACAAGAGTAC
ATCTAAAAACAGGAAACACTGACTATATCAATGCTAATTATGTTGAGACG
ATGACACAAGAGTACATCTAAAAACAGGAAACACTGACTATATCAATGCT
AATTATGTTGAGGTTTCAGACGTTGACAGAAAATACATTTTGGCACAGGT
TTCAGACGTTGACAGAAAATACATTTTGGCACAGGGTCCACTTCAAAATA
CATCTGGGGATTTTTGGCGGATGATTTGGGAAAATGATAGTACATCAGTC
ATCATGCTTTGTCGTATTGTTGAGAAGCAAATGGGTCCACTTCAAAATAC
ATCTGGGGATTTTTGGCGGATGATTTGGGAAAATGATAGTACATCAGTCA
TCATGCTTTGTCGTATTGTTGAGAAGCAAATGATAAAATGTCATCCATAT
TGGCCAATGGGTGAGGATGAAGTTGTAGAATTTGGAAGCTTCCAAATTCA
AAATGTACAGACGGTCATGAAACAACACTATGTCATCAGAGATTTACAAT
TGACTTATGTCTTGATAAAATGTCATCCATATTGGCCAATGGGTGAGGAT
GAAGTTGTAGAATTTGGAAGCTTCCAAATTCAAAATGTACAGACGGTCAT
GAAACAACACTATGTCATCAGAGATTTACAATTGACTTATGTCTTGACGG
GAGAAACGAAATCAATAAAGCAATACCATTTTATGACTTGGCCCGATTTT
GGTGTACCAGATGATGCAAATTCGTTTGTTGAGTTTCTCAATACGTTAAG
AAGGGATGATGTTTTTCAAAATCAAAGACCACCTGTTATACATTGCAGAC
GGGAGAAACGAAATCAATAAAGCAATACCATTTTATGACTTGGCCCGATT
TTGGTGTACCAGATGATGCAAATTCGTTTGTTGAGTTTCTCAATACGTTA
AGAAGGGATGATGTTTTTCAAAATCAAAGACCACCTGTTATACATTGCAG
TGCTGGTATTGGACGTTCAGGAACGTTAATTTTAGTGGATGCTGCCCTTA
AACTTTGCTGGTATTGGACGTTCAGGAACGTTAATTTTAGTGGATGCTGC
CCTTAAACTTTGTGAGGATAAGAACAGTCCAAATTCGTTAGACGTGAGAA
AGATGTTGCTAGCATTGCGTCAATTTCGTTGTGGCTTGGTTCAAACACCT
CAACAGTTCCGATTCGCTCACTTGGCAATATTGACAGGTCTCCATGATAA
GTTCCCCTCACTGTTCAGTGATGTTCCCAAAGAAATTGTGTGAGGATAAG
AACAGTCCAAATTCGTTAGACGTGAGAAAGATGTTGCTAGCATTGCGTCA
ATTTCGTTGTGGCTTGGTTCAAACACCTCAACAGTTCCGATTCGCTCACT
TGGCAATATTGACAGGTCTCCATGATAAGTTCCCCTCACTGTTCAGTGAT
GTTCCCAAAGAAATTGAAGAGGGTGATGAGGATGAGGCAGAGCCACCAGC
CTTACCAGAAAAATCGAAACATAACAAAGTACCGCCCAAAAAACCACCAC
GTGCCTCACACGCCACCAACACGCCCACCCCTGAGGATGACGTCCGCAAA
TATAATCAAATCACGGAAGAGGGTGATGAGGATGAGGCAGAGCCACCAGC
CTTACCAGAAAAATCGAAACATAACAAAGTACCGCCCAAAAAACCACCAC
GTGCCTCACACGCCACCAACACGCCCACCCCTGAGGATGACGTCCGCAAA
TATAATCAAATCACGGATTTAGAATCATCTGATGGTAGTGGTGAAGATGA
AGTGATCGATCTTTCTGAAGTTTCTGACGACAATGAGGAGGACGAAGACA
CTATACCAGATTCACCAATAGATTCCCAAGAACAACCACAACAAAGCAAT
GGTGTGGTTGAATCCAATGGAGATGAAGAAGATTACCAGGAATTGGATTT
GACAGGTAAAGATTCAGAGGAGGATGATAACGAAGTCTACCAAGAGTTAG
ATTTGACCAAAGTTGATCAGAACAATACTGGTAAGACAGATACATCAGAA
TCACAATCTAATATGGAAAAAGATGATAAAGTGGCTGATTTACCAGAATC
TTCAACTACTGCGCCAACCACCACTGATAAAGATTCACCCTTACCTGAAC
CACCAACTCAACAGAAATCTAAGATTTCGACAGCTGCTGGATCCAAGGCA
AGATTTAGAATCATCTGATGGTAGTGGTGAAGATGAAGTGATCGATCTTT
CTGAAGTTTCTGACGACAATGAGGAGGACGAAGACACTATACCAGATTCA
CCAATAGATTCCCAAGAACAACCACAACAAAGCAATGGTGTGGTTGAATC
CAATGGAGATGAAGAAGATTACCAGGAATTGGATTTGACAGGTAAAGATT
CAGAGGAGGATGATAACGAAGTCTACCAAGAGTTAGATTTGACCAAAGTT
GATCAGAACAATACTGGTAAGACAGATACATCAGAATCACAATCTAATAT
GGAAAAAGATGATAAAGTGGCTGATTTACCAGAATCTTCAACTACTGCGC
CAACCACCACTGATAAAGATTCACCCTTACCTGAACCACCAACTCAACAG
AAATCTAAGATTTCGACAGCTGCTGGATCCAAGGCAAGAGAAAACGAGTT
GCGGCAGAGGGAGAGGAGCGAGAAGAAAGAAGCCACACAAGAACTCATAA
ACAACATAAAACAGCGGATGAAGGATAGCGAGAACAAGGCGAAGAAGGGA
GCTTTTGAGAACAATACAATGCTACTATATGTCGGTGTCGCTATTGTCGT
CACCTCTTGTGTCGTCTTGGCATACAAATGGTTAAGTTGAAGAAAACGAG
TTGCGGCAGAGGGAGAGGAGCGAGAAGAAAGAAGCCACACAAGAACTCAT
AAACAACATAAAACAGCGGATGAAGGATAGCGAGAACAAGGCGAAGAAGG
GAGCTTTTGAGAACAATACAATGCTACTATATGTCGGTGTCGCTATTGTC
GTCACCTCTTGTGTCGTCTTGGCATACAAATGGTTAAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040614XLOC_040614-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041_pilongenomesc0000041_pilon:664211..671721 -
Properties
Property NameValue
Aaloc1471-1671:202
Aaloc1036-1467:982
Aaloc886-1032:1609
Aaloc706-882:2313
Aaloc652-705:3051
Aaloc499-648:3523
Aaloc367-498:4148
Aaloc268-366:4965
Aaloc232-267:5193
Aaloc169-231:5697
Aaloc64-165:6228
Aaloc1-63:7512