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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:1452697..1455416+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040588 ID=XLOC_040588|Name=XLOC_040588|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2720bp|location=Sequence derived from alignment at sc0000029_pilon:1452697..1455416+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttttgtcagatagtcccaagccaagttagagcagttgacggtagctt
ATAGAATAATGACCTCATTGTGATCTTAAATATTACTAAACACGTCTGGT
AAATAATTCTGTGACTGTTGGTAGGGCGTTTTGGAGTTATCCAGGTTTTA
TATGAAGGAATAAAATCAGTTTGGGATTATTCgctcaatttaaattttta
tgtgTCATCAGCTACTCGTCTATATACAAATAATCAATTCTGTCGAGATC
CTCTGAATAATCAAACATCATTGCATCAAACAGTTTATCATTGCCTCTGC
TTGTAATTTCTCTTTAACCTTGCCTATTGCTATCAAATTGAATCTGTTTA
TTTGTTCATAACATTGTTCATTATCTCTATGTTAGGACGCAAGCAATGGA
GATCATTCTGGTCATTATCACCAAACAGGGAACATCCAAAACCTTCAAAA
TATCCTGATTCAACAATATCCCTTGGTGTCTTCTGGATCCCAACACATTC
CATATTCCACTTCAAATAATGATGGAACATTTCATTCTACTTTTCAACAT
TCTAGTGGAGGTATATTTGATCGAAGCATTGTTTTTGAGAGTACATTTAC
TTTTCGTGTTATGTCTGGTTATGTAAGAAGAAAATGATTAAAAGTGGTTC
AAGTAGTTATTGgacattttaaaaacatgtcACAACAATTCACTCATTTC
ATGTTTatgactttttgcacaaagatctTTACTTGCCAATTTCTCCACGC
ATAAGGTGAAGGAGCCCAATATTTAAAAAGTTGGGattaattcaaaatta
gaaacCTTTCTGAAGTTGTGAAGAGAATCTGTCAATTTCAAAATCTCTTG
tcattttaataaaatcaaaagccttttcatatttcaatcttctttctctg
attttcagCTCAAGGTTTCACTGTTGGTGGATCGAATTATGTCAGTACTG
ACTTCATGTCACAATCTGCTGCTCTCCAGcaacaaacagaaaattccTCC
caacaacaaaaccaacgacaactcaatcaacatgaatcacaacaacaaca
acaacttcaacaaattcatcaccagcaacaattacaacaGGTATAGAGTA
TACATATTCTGAGGTTAACTTATTTTGCACGATTTTGCAGATTCTTCAAA
GAACTTCCTGTAGTCTTCAAAGTCTGAGCAGAAATGACACCTAGGTTTTA
TCTTAATTCATATTACAGCTAAGATTAACCATCCACACAGAAGTGCCCTA
TAATTTCAACATAATTCGCGTCAGTATGCCAGAGCATATCCAGGCATATC
AGTGACAACCAAACTTACTTGATTGAATCTTTGTATTATTGCAACTTTCT
GTCTTAAGACAGAAACCCGTCTAGTTGAGAGGCATTTCATTTCTGTCTTC
TCAGTAAGATggttttttttgttcaataatTATCACCAAGCCTAATTGTA
ACActggataattttttttttaatttacagcAGATTCAACATGTGCAAGC
ACAGCAACAGCAAATGTCTCAACAACAATCGCAACAAATTATTGCAACAA
CACCTGATAAACATTCTTCAATGAATAGCCAGTTGGATACAAGTCAAAGC
ACAGCTTCAACCAAATCGATGGATGAAAATGAATCCTCTGGTATGTATGT
TTACGCCACTTTACCAGGGAAGCTATTAGTCCCATTGTGAAATCCAACCT
TAGGCACCCCTCCTTTGGCTCATCACTAAAACGCTTGGTAAGGGATCAGA
AGGTTCATTACAGCATTGATTCTGGTGAAGGTTTAAGCATGTTTTGAGAG
AATATCTCTATCGAAATTATTGAGATAATGAACTacatgctttttataag
aataacttctaaaATAATATGAGGGTGAGATTTAGGAGTTAGAACGATGT
GCCTTGTTTGGaacaattgaaaaataagaataatgccaCGCTCAGAcaaa
aaacactattcttataaaaaagcgtgtatttggtAAGCCTCAAACTATCA
ATCCGAAAAGTAAGGCAACTGTAGCCTAAACAGAAAGGAAATATCTCTTg
ctttgaattttttaaccatATAAAACTTGTCCTGACCTATCGGCAAATTT
TCGCACAGTTCCGTCCTTTTTGAGGTTGGTCTCACTgctaattttttatt
cattcaatcaTTCATTACATTTCAGACGAAGACATACACCAATGTGGGCG
TTGCAAAGTTGTTTTCCATGATGTCACGGCTTACTTGAAACACAAACAAT
CTAAAGCTTGTAAAACCATTAAAAGCAGTTCACCGAACAAACAACAAGCA
TCACCAACCAAAACACCTCAACAGCAATACTCAAGCAGTGGAGATACTCA
GCAATCACAAGTCCAACCTATGGGAAACGaacaaataacaacaacaaccc
agcagcaacagcagcaacagcagcagcagcagcagcagcagcagcagcaa
cagcagcagcaacaacaacagcagcagcatcagcagtctcaatcccaaac
agaaaacaaccaaaacattcTAGAAGCTGCAGCCAAGAATACCATATTCC
GTGATTCTTTCATCTCCATTAGAAACGAGATTCAAGATATTGGTACCGAG
AAACGGGGAGTTGAGGAAAATGAACCTCAATACACTTCTGAAGACTTATG
GAGCAAAGAGAAAACTGGTGATGATATTTTGCTTTCCCAGGAAGACATTG
TTGACGAAGCTGGTaaaaaa Coding sequence (CDS) from alignment at sc0000029_pilon:1452697..1455416+ >XLOC_040588 ID=XLOC_040588|Name=XLOC_040588|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2178bp|location=Sequence derived from alignment at sc0000029_pilon:1452697..1455416+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttttgtcagatagtcccaagccaaatgttttgtcagatagtcccaag
ccaaGACGCAAGCAATGGAGATCATTCTGGTCATTATCACCAAACAGGGA
ACATCCAAAACCTTCAAAATATCCTGATTCAACAATATCCCTTGGTGTCT
TCTGGATCCCAACACATTCCATATTCCACTTCAAATAATGATGGAACATT
TCATTCTACTTTTCAACATTCTAGTGGAGGACGCAAGCAATGGAGATCAT
TCTGGTCATTATCACCAAACAGGGAACATCCAAAACCTTCAAAATATCCT
GATTCAACAATATCCCTTGGTGTCTTCTGGATCCCAACACATTCCATATT
CCACTTCAAATAATGATGGAACATTTCATTCTACTTTTCAACATTCTAGT
GGAGCTCAAGGTTTCACTGTTGGTGGATCGAATTATGTCAGTACTGACTT
CATGTCACAATCTGCTGCTCTCCAGcaacaaacagaaaattccTCCcaac
aacaaaaccaacgacaactcaatcaacatgaatcacaacaacaacaacaa
cttcaacaaattcatcaccagcaacaattacaacaGCTCAAGGTTTCACT
GTTGGTGGATCGAATTATGTCAGTACTGACTTCATGTCACAATCTGCTGC
TCTCCAGcaacaaacagaaaattccTCCcaacaacaaaaccaacgacaac
tcaatcaacatgaatcacaacaacaacaacaacttcaacaaattcatcac
cagcaacaattacaacaGcAGATTCAACATGTGCAAGCACAGCAACAGCA
AATGTCTCAACAACAATCGCAACAAATTATTGCAACAACACCTGATAAAC
ATTCTTCAATGAATAGCCAGTTGGATACAAGTCAAAGCACAGCTTCAACC
AAATCGATGGATGAAAATGAATCCTCTGcAGATTCAACATGTGCAAGCAC
AGCAACAGCAAATGTCTCAACAACAATCGCAACAAATTATTGCAACAACA
CCTGATAAACATTCTTCAATGAATAGCCAGTTGGATACAAGTCAAAGCAC
AGCTTCAACCAAATCGATGGATGAAAATGAATCCTCTGACGAAGACATAC
ACCAATGTGGGCGTTGCAAAGTTGTTTTCCATGATGTCACGGCTTACTTG
AAACACAAACAATCTAAAGCTTGTAAAACCATTAAAAGCAGTTCACCGAA
CAAACAACAAGCATCACCAACCAAAACACCTCAACAGCAATACTCAAGCA
GTGGAGATACTCAGCAATCACAAGTCCAACCTATGGGAAACGaacaaata
acaacaacaacccagcagcaacagcagcaacagcagcagcagcagcagca
gcagcagcagcaacagcagcagcaacaacaacagcagcagcatcagcagt
ctcaatcccaaacagaaaacaaccaaaacattcTAGAAGCTGCAGCCAAG
AATACCATATTCCGTGATTCTTTCATCTCCATTAGAAACGAGATTCAAGA
TATTGGTACCGAGAAACGGGGAGTTGAGGAAAATGAACCTCAATACACTT
CTGAAGACTTATGGAGCAAAGAGAAAACTGGTGATGATATTTTGCTTTCC
CAGGAAGACATTGTTGACGAAGCTGGTaaaaaaACGAAGACATACACCAA
TGTGGGCGTTGCAAAGTTGTTTTCCATGATGTCACGGCTTACTTGAAACA
CAAACAATCTAAAGCTTGTAAAACCATTAAAAGCAGTTCACCGAACAAAC
AACAAGCATCACCAACCAAAACACCTCAACAGCAATACTCAAGCAGTGGA
GATACTCAGCAATCACAAGTCCAACCTATGGGAAACGaacaaataacaac
aacaacccagcagcaacagcagcaacagcagcagcagcagcagcagcagc
agcagcaacagcagcagcaacaacaacagcagcagcatcagcagtctcaa
tcccaaacagaaaacaaccaaaacattcTAGAAGCTGCAGCCAAGAATAC
CATATTCCGTGATTCTTTCATCTCCATTAGAAACGAGATTCAAGATATTG
GTACCGAGAAACGGGGAGTTGAGGAAAATGAACCTCAATACACTTCTGAA
GACTTATGGAGCAAAGAGAAAACTGGTGATGATATTTTGCTTTCCCAGGA
AGACATTGTTGACGAAGCTGGTaaaaaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:1452697..1455416 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 781-1089:2412 |
| Aaloc | 559-780:2178 |
| Aaloc | 397-555:1481 |
| Aaloc | 334-396:1028 |
| Aaloc | 205-321:911 |
| Aaloc | 28-201:386 |
| Aaloc | 1-27:1 |
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