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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:1497279..1504083+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040585 ID=XLOC_040585|Name=XLOC_040585|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6805bp|location=Sequence derived from alignment at sc0000029_pilon:1497279..1504083+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAATTCATACACTGTGCAAAGCGATCAAGGAAACCAACCACCGTCAA
AAAGCCAACGAGAAAACAAGATATTGAGGTAAATCTTTGTtcacaaacac
aaaaaaatctccataactcgaatttctAATACTCGAAGTTTCTTGTTAAT
TCAAACAAGTTCTATATCTTCAGTTAATTCAATCTTAGAAGTCTCTATAA
CTTAGAATATTCCATAAATTGGGTAGATTTTGGTTCCAAAAGGCGTGTTC
TAGATATGGAGAGTCCAAtttatcaattttgggtgtctttttatctagta
aacttttcttttcttcggtatttttttGCACTGTGCTATACAGTCAGGAC
CATCGCAATTTATTCATAAGAAATAGCGGTACTGTGGGTATAACAACATT
GATTAGCTGCTGGTCACACTTTATTGAAGTAGTGTATgcccaaaaatatt
caaattgaacACGCTACTCAATAAAAATATGCAAAGTatagaaaacaaaa
acagtAGAGTCTATCCATGTCATAGACCCGCTggaaccccagccccactg
gaaagtcataaggaaaatttttgtccccgcttggaaaatacccttgaatt
tcagcccaatTGGGAAATTGAtcttgatttcatccccactcgagattcca
tgtttaaaaattgcactccaaaaccatcccccgTTAGGTTttcaaccttg
gaacaatagaatttctatccccattaggatttcgataggaatttccatcc
ccactgaggaaaaaagttccaccggggctgtgagacaggggtgtaggtGC
GGGAACACAATActgttcaagttatggagaaaAGTTTATAAGacattccc
agctggcacacaacgttgttttaacgtttgtgtaacgttatatggaacgt
tgtgtgccagctgggttgttaactgaaggggccATAAAAcatattcgagt
taaggagacattcaagttatatacattcgagttaaaaagatcttttttaa
cACGAAATACTTTTCTATACTCTTGACAGCATAATCCATCGAAAGGAGAA
GTAATGGCAAACCTTAATGTGAAAGATGGTGATGATTACCTTGAACCAAA
AGATTGGAAACAACCAATAGAGCTTATTGGTAAGACTTTCTACTTAGTAG
AAAccagctggcaaacaacgttgtttcaaagtttttctaatattcacaac
gtccaaacAACGTCCATATATATAATTTTAGATAATATCCCGAGGTGgga
gggtacttaggcaaaaatggtgCAGACGGTAAGGATcggttttttcactt
ttcaaagtctctctaagggtcacaaaaatcaaataaattgaattagtctc
tctaagggtcggaaaattcacagGGTTTTATTCTAAGGgtagggaatttt
tcaaaaatcaaggaaaatatttcaaaaaagtctctctaagggtcaccttt
tcagcaaaaatcagtctaaGCACGTACAATCAGTCTGCGGAGCAAGAACT
CTTTTAGATTCGGTGATTTGGCAGTCTAAAGTTTGAGCTAGCTATAATCA
ATTTTTGCCACAGCAGAGAGCCATTATTTCATCTTTCTTTTGACCagtag
cgtggaagctttgctcgaaataGAGCGATTGCAGCGCACACAAGTAGAGA
CCAGTCTTTAGAGGTAGAACTCCTCAGCCTAGccaaaaatttacattttg
acttaaaaatttCAGTGACATCAAAACGCAACGAATCGATAGCTATGACC
CGGAAATCGCCGACAACTCCGACACCTTTATTGGACGATTTTTCCAACAA
CCAAACACTTCCTGAAAGACCTTTTCCAAAGGAGGATAATGCGCACAGGT
atacatgatatgcaccactgcaatgtcttctgacattacatcacggaccc
aacagatgattggttgtaagtgacgtaaaatcagtcaatacgtcactttc
aaccaatcagctattgggtggaacggaagacattgcaatggtgcatacca
TGAATACTCAAATTGTTTGATTAAAGATGTTCTTCTTTATGATATAGGAA
AGGAGGCACGCCTCTTATGCTGGCAAAGCCGAAgtaacaaaaaagtttct
caggATTTGTGCTCGCGTAGCGTAGAGCTTGtagttttaaaaattctttg
cAAGCAAACGGTAGAAGATACGCAAAACGTAAAGTTGATGTAATGTATTG
TATTTCATTTATTCAGCAAATGCCCTAGTTTAGACTGTGCAATCAGATTA
GACAGACTATTAGCTCCACTTGGAGGCATCGgctttttttcattatatta
CCCTTTGTTATAAGCGTAGGTGAAATGGTGTAACATAATTAATACagtta
attcgattttcaagggggggggggggtttgaagGGGTCCAAAATACCGTT
TCcccgtcaaaattttggatgaatcccggaatcccgaaaattgaaagaaa
taatagcaccgtcacaccggtttgtaaaGGTTAAAATACCGGAATACTGA
CActgtcaccgtctgattttagaATATCGTTTTCTCATCTCtttttttCA
TCAAGACCGGTAATACTgcactaaaaaagggccaatcccttCACAACGTA
AAAGCAGAAACCAGCCATTCAAGGGACCAAAACTTTCTTCGAACTATAGA
AATATTCGGATTACGAAGAATATTTGATAGGAGTTTCAGCTAAGGGGACC
AATGCTTtggttcaaattacagaaagattcgaatactAAGGGTTCGATTT
AGGTATGGTTGACTGTACGAAAAGCACGGTTCAGGCTgacaagatttttt
tatttccatttcTTTTCAGTGCCGAGACAACGTTGTCGCTACCCAACAAC
AGTAAAACAACAACACTTTCCTATGACAACCCTCCAATGGATATACCTCA
AAGTGAAAACGAACGAAAAAGTTCTTCTGCTCCATTACTTGACAATAACA
CCCCTCCAGCTTTTTCACGACCAACTTCTCTAGACTTAACTGTAAgtaat
atttacaattttttctttctctataacatttttttcaaaagacaaTGAGG
CCTGGGGGGTTGGGGTTGGGTTCATAGGCAAAAACAGGTTCTGGGTATGT
GCGGGTGGTAAGGCTTggttacaaaaacaacaaaaagtccCTCTTAATGT
TGGAAATCTGTTgaaaatagtctctctaaggataacctccgagcagattc
tgatacaCGGCACGGCACGTACGACACGTATTAACTTTAAAGGCAATGGA
TCCGTAATAGAATATTCCCAGGGTGCACCGCTTTGATCTAGTTTTTCATT
CAGTTTAGGGATAAATATTAACTAAAGCTTTGGAGTGCGGTAAATGTCTA
CAGTagcaaaaaaacgtgtacaccaaaatcaaaagaaatcaaaaacataa
atattagaacccagtcgcgtTGGCTTTCATTTTGAAACATAAAACAACTA
AGAATACTTAAGGAACAATCCTGGAATGActgaataagaacaatttgaga
caaaacaaaattccaaaaaggACAACTCCCGGGCATAAACAAAAGTTTTC
TGACTCTTTCAAAAAGGTAGTTTTCTTGGATCTCTAATACTTAACATGAC
AAACTTGGAGAAATATAGAAATCAATACACGAATTTTTCTTTCCATATCA
TTGTCAGTTCAAGAAAATTAAGCTAAAAAATTTCCTTTCAATCATCGAAT
CCTAATCTATACTTGTAGAGCCCACACGCAGCAGAAAATATATACAGTAA
CCTTCCAACATCTCCAATCAAGCAAAATAATCAATCAAATGCACCAAAGA
ATCCATCAAAACCAATAAAACCTGGTTATTGCACCTTAGAACCACCAAGT
AATTCAACTGCTGCACCATCGAAACTGAAGCCTCGAAAAAGAGCAAGTGT
TCCTGATAAGAACACTTTGCCAAAAACCATCCCAGAAAATCAAATTCTAC
CTTCCTCACCAGGGGATATGATTATTCCCCAGAGAAATGGAGTAAGTGAC
CATATTGCCACATCAATTTAATATTCGTCTAAATAACGTTGAAACAAGGG
GTTCTGATACTCCGATATTTTTGCATTCTGGTCCGTAAAATAGACACCTA
CAAGAAAATTTCGGACAGCAAACAAATAAATTCGGAAACTTCAGATATAG
TGCTACATGATGATATATGTTTGCACGTGCCTCTACGACTGTCATAGTTA
ACCTCCCCCAGCTCCCGGACTATTAGCCAATTTTGATATCAGTCGCAAGC
TGTTTGAAGCATAGCCCGTACAGAAAACGCCGTTATGGAAGCCTTCTCTC
TTTGTAACTttaacttgcgttgagaaatttgTTTGTTGTCAAGAAAAGTT
TGGTAACAAGATCAAGAACTGAGCTACTTAACTTTTGACAGTCTGTTATA
AACAAAAGCCGAGAATAACCTTACAAAAccataccctgagtatcagaggt
taagttttcaagaatatattaacctctgaagaccaataatcgaaatttta
tcgtgcatgtgtcaatctaatcaatgtagaaagaatcaaagatgaagagc
aaatattaccttattaatgtctagcagactgtatcagtatgcagtttact
atttacgaattccccagaaacctccaagtgtaattgaagtgagtttcttt
cgaaagaaatcttttacatgatccccaaatgtaaaacagtaattactaaa
ctattaattatggaaatgtcactttaattgaatcgaaataatagacagac
tttatgttatgattctctatcactgactctttttaaaaagcattgatgat
attttttagttgtgttttcaatgacgggaataaaaatatcaactttgaac
ttcatccaagatcttggatggtcgtcatggttacttttgtcttcgttgat
tgcgcgctgaatagaatctcgattcgtcggcacagtgtcgatatatgatt
tcgacctgtgcttttcacggtaacaaAACCAGGGTTATTTATACGGACTA
TAAATGTAGACCATCCCCACTAGAAGCTTTCCGTAGATGCTTAAACCATG
TATCTTGGTCTTACAATACTCAAATTCATTGTACTATTATGCATTTTTGT
TTCAGCAAATCGGGGATAATCGGGATAGCACGAGATCCGATTATTCAGAA
TGGGGATCCGATTTTGATTATTCGGACGATTATAACACTAAAAATCCGGA
CACTGAGAACCACTACCAGAGCCCTTTAAACACTCTACCAAGAGGAAATC
CTGAAGCTTCTTCCGCTCAATTGAAAAATAACCAACCTCGACATTATCAA
GAGCCACAAAAATCATTCAAACAACATGATAATAATTCTGCTGAGCCTTT
GAATCAACAAGAAGCAAAGGAGAAATCCCTAACGGCACAGTCTAATGAGT
ATAATAACCCTGACAGTTTACCAGTAAGTAGGTGTATTAATTTCttaacc
tcgttccctgcgtaatCAGCTTTATTATGCTTACTGATAACTCTGgcggc
gtcaatcagtaacgtaaataaagcctgggatacacggggacgaggttgtt
aATTTCTTTCTTAGATAAATCTAACTTATGATGGTCTTAAAGGTTTTact
tttaaataagagtgatatcgtttgcttattcgtcaattttaatttaaaag
ctttttcacattgaattaacacagatgtggagcaaggttggtcagaaaga
ggattagaaaaacatttttttgcttatatcagcacaatataacaataggc
agacactgtcctgatatgaaatatgtgtctgaatATGAAATGGGAACCGT
GGAAATGAAACCTTTAACTTTAGATATTACTAGGTTAGAATCTAGGTTGA
ACggtcgacgctctctaattcgattttcaaggggaatccgattttcatca
aataagggagtgcatcgaataatagagcgtcgttaaagagagtttcttgt
tgacgctGACTTACAATATCGTGAATGGAGCCCATCGAATAGTAAAACGT
GCGTCAACTGTATAAAGGTTATCGCGAGAGTTAGGATTTAAATGGCTCTA
AAACAATTtctatttaaaaacaataacTCGGTATCCCATCTTtaacaaaa
ttactttttaatttttgtactATCAAAGTCATGATAtctgagaaaaaagg
gaaattcccacgaaatcttactaAACTACAAACGATTTAAGAAACGCTCT
AAAATAGGTTGgaaagggtagagttttagctctgagttttaacgctagac
tagaggatcaaaaagttcaaagttGTTCCAATTACAATTGGgttcagaat
atagcctggaagtctataaacccctcccgaataattgaaatattcgaata
aatttatcaatttgcccaaaagcgactttctcgcccgaactttaaattgc
taaaaacgaaaaattaaccaaaattctcaatatatttagACCGAGAttat
agtgaatttttaatcttGTGTAACCTCATATTTATTGTTTTAGAGACCAC
GAGATGCCAGTTTAGCATCAAACGCCTCTGGATGGGGCTCAGATAACAAA
TCACCACTTGGGAAtaaagaaagtcaaaagtacTTTGAGTATAATGAAAC
TCCGAACAGTGAAAGAATATACGGGAATATTGGCGTCGACTCGAACGGGA
ATCGACTAGCAGGAACTGACAATTCTGCAGAACCCCCACGTAAGAATCTG
CCTGTTAGTGATACCAATAAACCGGACAAAACGTATCAGCATTTAAAGTC
GGTCCGTCGACATCAAGAAGAAGGGGTTTACGCAACATTGAAGCagacat
tttga Coding sequence (CDS) from alignment at sc0000029_pilon:1497279..1504083+ >XLOC_040585 ID=XLOC_040585|Name=XLOC_040585|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2772bp|location=Sequence derived from alignment at sc0000029_pilon:1497279..1504083+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAATTCATACACTGTGCAAAGCGATCAAGGAAACCAACCACCGTCAA
AAAGCCAACGAGAAAACAAGATATTGAGAGAGAATTCATACACTGTGCAA
AGCGATCAAGGAAACCAACCACCGTCAAAAAGCCAACGAGAAAACAAGAT
ATTGAGCATAATCCATCGAAAGGAGAAGTAATGGCAAACCTTAATGTGAA
AGATGGTGATGATTACCTTGAACCAAAAGATTGGAAACAACCAATAGAGC
TTATTGCATAATCCATCGAAAGGAGAAGTAATGGCAAACCTTAATGTGAA
AGATGGTGATGATTACCTTGAACCAAAAGATTGGAAACAACCAATAGAGC
TTATTGTGACATCAAAACGCAACGAATCGATAGCTATGACCCGGAAATCG
CCGACAACTCCGACACCTTTATTGGACGATTTTTCCAACAACCAAACACT
TCCTGAAAGACCTTTTCCAAAGGAGGATAATGCGCACAGTGACATCAAAA
CGCAACGAATCGATAGCTATGACCCGGAAATCGCCGACAACTCCGACACC
TTTATTGGACGATTTTTCCAACAACCAAACACTTCCTGAAAGACCTTTTC
CAAAGGAGGATAATGCGCACAGTGCCGAGACAACGTTGTCGCTACCCAAC
AACAGTAAAACAACAACACTTTCCTATGACAACCCTCCAATGGATATACC
TCAAAGTGAAAACGAACGAAAAAGTTCTTCTGCTCCATTACTTGACAATA
ACACCCCTCCAGCTTTTTCACGACCAACTTCTCTAGACTTAACTTGCCGA
GACAACGTTGTCGCTACCCAACAACAGTAAAACAACAACACTTTCCTATG
ACAACCCTCCAATGGATATACCTCAAAGTGAAAACGAACGAAAAAGTTCT
TCTGCTCCATTACTTGACAATAACACCCCTCCAGCTTTTTCACGACCAAC
TTCTCTAGACTTAACTAGCCCACACGCAGCAGAAAATATATACAGTAACC
TTCCAACATCTCCAATCAAGCAAAATAATCAATCAAATGCACCAAAGAAT
CCATCAAAACCAATAAAACCTGGTTATTGCACCTTAGAACCACCAAGTAA
TTCAACTGCTGCACCATCGAAACTGAAGCCTCGAAAAAGAGCAAGTGTTC
CTGATAAGAACACTTTGCCAAAAACCATCCCAGAAAATCAAATTCTACCT
TCCTCACCAGGGGATATGATTATTCCCCAGAGAAATGGAAGCCCACACGC
AGCAGAAAATATATACAGTAACCTTCCAACATCTCCAATCAAGCAAAATA
ATCAATCAAATGCACCAAAGAATCCATCAAAACCAATAAAACCTGGTTAT
TGCACCTTAGAACCACCAAGTAATTCAACTGCTGCACCATCGAAACTGAA
GCCTCGAAAAAGAGCAAGTGTTCCTGATAAGAACACTTTGCCAAAAACCA
TCCCAGAAAATCAAATTCTACCTTCCTCACCAGGGGATATGATTATTCCC
CAGAGAAATGGACAAATCGGGGATAATCGGGATAGCACGAGATCCGATTA
TTCAGAATGGGGATCCGATTTTGATTATTCGGACGATTATAACACTAAAA
ATCCGGACACTGAGAACCACTACCAGAGCCCTTTAAACACTCTACCAAGA
GGAAATCCTGAAGCTTCTTCCGCTCAATTGAAAAATAACCAACCTCGACA
TTATCAAGAGCCACAAAAATCATTCAAACAACATGATAATAATTCTGCTG
AGCCTTTGAATCAACAAGAAGCAAAGGAGAAATCCCTAACGGCACAGTCT
AATGAGTATAATAACCCTGACAGTTTACCACAAATCGGGGATAATCGGGA
TAGCACGAGATCCGATTATTCAGAATGGGGATCCGATTTTGATTATTCGG
ACGATTATAACACTAAAAATCCGGACACTGAGAACCACTACCAGAGCCCT
TTAAACACTCTACCAAGAGGAAATCCTGAAGCTTCTTCCGCTCAATTGAA
AAATAACCAACCTCGACATTATCAAGAGCCACAAAAATCATTCAAACAAC
ATGATAATAATTCTGCTGAGCCTTTGAATCAACAAGAAGCAAAGGAGAAA
TCCCTAACGGCACAGTCTAATGAGTATAATAACCCTGACAGTTTACCAAG
ACCACGAGATGCCAGTTTAGCATCAAACGCCTCTGGATGGGGCTCAGATA
ACAAATCACCACTTGGGAAtaaagaaagtcaaaagtacTTTGAGTATAAT
GAAACTCCGAACAGTGAAAGAATATACGGGAATATTGGCGTCGACTCGAA
CGGGAATCGACTAGCAGGAACTGACAATTCTGCAGAACCCCCACGTAAGA
ATCTGCCTGTTAGTGATACCAATAAACCGGACAAAACGTATCAGCATTTA
AAGTCGGTCCGTCGACATCAAGAAGAAGGGGTTTACGCAACATTGAAGCa
gacattttgaAGACCACGAGATGCCAGTTTAGCATCAAACGCCTCTGGAT
GGGGCTCAGATAACAAATCACCACTTGGGAAtaaagaaagtcaaaagtac
TTTGAGTATAATGAAACTCCGAACAGTGAAAGAATATACGGGAATATTGG
CGTCGACTCGAACGGGAATCGACTAGCAGGAACTGACAATTCTGCAGAAC
CCCCACGTAAGAATCTGCCTGTTAGTGATACCAATAAACCGGACAAAACG
TATCAGCATTTAAAGTCGGTCCGTCGACATCAAGAAGAAGGGGTTTACGC
AACATTGAAGCagacattttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:1497279..1504083 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1075-1386:6494 |
| Aaloc | 757-1074:5106 |
| Aaloc | 484-756:3719 |
| Aaloc | 313-483:2821 |
| Aaloc | 181-309:1718 |
| Aaloc | 79-177:1030 |
| Aaloc | 1-78:1 |
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