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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:2965841..2973009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040413 ID=XLOC_040413|Name=XLOC_040413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7169bp|location=Sequence derived from alignment at sc0000006_pilon:2965841..2973009- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCCAACAACGTCCTCAAATATTTGCTTTGCCACCACCACCACCCCA
ACCACCACTACCACCGCAGCACCGACAACCTCCACTACGACAATCTCCAT
CACGACAACCTCCACCACGACAACCTCCACCACCACCACTTCAACCTCCA
CCATTTTTTCGTCCCCTGATGGAATTACCGCCCCCACCACCTCCTCTGCC
ACCAGTTGGAATATATGGTTTACACCATATTAATGTTGATGTGAGTTCCT
TATAAAAGTTTTTCTTTAACCCTATTCATCCTAGGTTTTTAGGGGCGGCT
CAAAACTAGGGAGGGGGGCTTTTCCTGTACCACCCTTAACTTTTGATCTA
GTGGATCTTTTTGGATGAAATTTGACACACAAGATCTTTGTCACATAAGG
CAACTTTTGACAAAAATTTTTTTTGATGACGTCACTCATCATACCCAAAG
TGAGCAAAAACCGAAAATGTCCTTTGTTCTTATAAATAGCTATTGTATTC
TAACAAAAGTTTTAGAAAAAAGTTGCCTTATCGGTGACCCAGAAATATCT
GCAATCTGATTGGTTAAAAAGAATACAATATATCTTGTATTTTACATGTA
CAAAATATAAATTGAAGAAAAGATGTGTTGTTGCATTGTAGCGGTAGCAG
CAATCTAACGTCACTTTGCTACAAAAGTGCCCTGCGCTTTTTTCTCACAT
AAAAAGTGCATTGTCATGAGGACATAGTTCTGCAATTTTATTATTTATGT
TCGTAGTTATGGTAACCATTGAATGGAAGCTCACCTTGAGTACATTAGAT
AGAAATTTTATTAGGAGAAAAAACACTTCGCTTTTAGCCTCGGGCGAGGC
AAGTCCTCCCGTCGGGGAGTATCAACATGAGAGAAGAGATCCAGGTACCA
GGAAGAGTAAAGAGTTCGTTCGGAAATGACACCGGCCAGGCAGAGTCGAT
CGTGCGTTCCCGTCTTCTCGAAGTGTTGAACGTTATTGAATTTTTATGCT
TTATGGAACTGTATGTTTGGATATTGTATAATGAGTTATCGAATGAAATT
AGACTTCAACATTTTGTGTCTCCCACCTCCTTGATCTACTCCATGAACTC
CATCTCCTGTCTTCTAACAGCAGTCAGGCCGATATCCGGGGAAAAACTTT
TAAATAAAAATGTTGTTGCCGTGGGCCCAGCTTTAACCGGCCGGCGCACC
GCGACATCTGGGGGCTCAACTTTAGAGGATGAGCCTGATGGAGATAGATT
ATAAGGGAGATGTACAATAAAAAAATGGAAAAATTCAAAAACCGAACTTT
GAAAAAAATACAACGACAATTTCAACATTTACAACATACAACAGCTGAAA
ATCGAACCGAATTGTTTGAATGCTGAATACTTGAATATAATATGAAACAC
TTTCTGTATTGTTGGAGAATTGTTTAATCGCTATGGTGGGTGTGGTTCTT
GTTAGAAAAGTTTGACATACCTCAAGTTCACTTACAAGTTCTTTCAACGA
TATACAAACTCCGCATTTTGTCCTAGCTTGCCTAGTTGCGTTTACCTTCG
CACAATTCCAAGCTCAGACAAACCTAGAAGTTCAAATTATCGCCTTAAGA
ATCTAAAATGAACTTCTGGCAGTGATGTACGACGAGAAACCGACTATTTC
GACCGTATTTATCGAATCAATTATCCTCTCGAGACGTTCGGGCATTGGGC
GAGTGGCAGCTGAGGCACTAATCCACGATTTACCTACATTGAAAAACTAT
GACAATTATTTCCCCGTCTAGTTAGTCGTCGCACTATCGACGGTACGATG
GACACGATTTGTTATAACAATAACAAACAATCTTTGTGAATTGAAAACAA
ACCAGAACAAACTGTAGCTGATTTCAAACTCTTCAAATGTATGCACCTTT
CACTGAAACTTGATACACCTGCTTGCGAGCAGCCTTTCAAATTAAAATTT
GATTGCTTACCCATTTTTCAAACTGTATAACTTATGATTTATTGATACCC
AAATTACCGTCAGCCACGCCCCGAATCATGAACAATAATGAACAAACGTT
GTATAGAAACCACATGTTAAATCAAACCCAAGCAACTTAATTATTAATGC
TCTGATTTGATTATTTGTGGAAACCAAACGTCTATGGCAGCGTCCAACAT
GGATTCAATCGATTTTTAAATCGATGGCCGCTCTTCAGATAACCACCAAC
CTTGTGTCGGACACGATGTGACTATTGAAAACGTCCACGACTGCTCCTCT
TTTGTTTATGAGCCAATCACATTGGTGTTTATCGTACAAACTATTTGTAT
TGAGATCATATGAATCACCTAAACGTTGACCACGATGACTTTCCGATTTT
CGATGAGCATGATAAGACTTTTAGATCTTTCTTAGCTGATTTTAATGAAC
TGTCTTCCGTTGCTGAATTGAGTGACAACCAGAAGCTGACTCTACTACCA
ACCCGTTTGAGACGAAGACCAAAATGGTAATTTCGAGGACTAAGCAACGA
GCGAAAGAATACGTATGATAAAGACATTGAAAGTCTGATTACTGAGTTTG
ACAATGAATCTCTTTTGAGAAAGGATCTCTATTCTATCAAACAGGGTCAA
TCTACGTTAGATGAATATGTTGAGAAAATGGAACAAATGTTTACCGAGCT
GAATGTTAAACCAGATGAAAAGTTAGATTTCTTTATGGCTGGTTTAGACG
AAAACACTCAAAATGATTTGTTCCTGAACGAGATTGATTCGTACAAAAAA
GCTGTTAGAAGACTGAAGCTGAAGTTGTCAATCGAAAAGAGAAAATCGTC
AAAATCGAAAAAACCCTTTACGAGAGATCGAGAAATGTCCGAAAATAAAG
CACACCAGTCCAAAACCATGGGCAATGACCAACTTTGTTACGTTTGTCAA
GAACCTGGCCATTTAGCGATTAACTGTTGGTTCAGAGTACGCAAGAAGAA
CATTACGAGCAATGCCAAAATATAACAAAAAAAAATGAAAACGATATAGA
TCCATTTTAAGAAAACTATTCGAAAGATTGGGGACCAATCTCCATTGTCG
AGGGAGTGTTGTCATGAGGACATAGTTCTGCAATTTTATTATTTATGTTC
GTAGTTATGGTAACCATTGAATGGAAGCTCACCTTGAGTACATTAGATAG
AAATTTTATTAGGAGAAAAAACACTTCGCTTTTAGCCTCGGGCGAGGCAA
GTCCTCCCGTCGGGGAGTATCAACATGAGAGAAGAGATCCAGGTACCAGG
AAGAGTAAAGAGTTCGTTCGGAAATGACACCGGCCAGGCAGAGTCGATCG
TGCGTTCCCGTCTTCTCGGAGTGTTGAAAGTTATTGAATTTTTATGCTTT
ATGGAACTGTATGTTTGGATATTGTATAATGAGTTATCAAATGAAATTAG
ACTTCAACATTTTGTGTCTCCCACCTCCTTGATCTACTCCATGAACTCCA
TCTCCTGTCTTCTATCTTCTAACGGCAGTCAGGCCGATATCCGGGGAAAA
ACTTCTAAATAAAAATGTTGTTGCCGTGGGCCCAGCTTTAACCGGCCGGC
GCACCGCGACATCATTTTTTGGGTCACCGATAAACCAGTTATCAGACAGT
TGCGAGTACAATATGGAAATATTTCGCTCGTTCCGGATTTTCCGTATATT
GTAAAATATTGTACGGAAAAATCTCGGAACTCGTAAAATATTTCTCATAT
TGTACTCGCAACTGTCCGATAACTATTACGTATTAGAAAAGTGTCATTTT
TTGTGACACATAACTGTCAGAAATGTCATCATGCTCAAGGTGTGAGAATT
TTTAGGTATCAATTTTTTTTTTGAAGCTAATAAAAGTTAGGAATTTACAT
AAAATTTCATGGCAAAAGCTCTATTATTTCAGGAGCTATTACCATTAATA
TGACCTCAGAACAGAAATAGCCCACCACCACCCCCCCCCCCTAGGACGAA
TAGACATTTATCAAATTATCTGTCAGTAAAACCCACAAAGCGAATAACTT
TTGATACAATTTGATTGCGCTTTTGTGGTCGGAAATACCTTAAGTGGATA
AATTTTGGCGTGGATTTAATTTGGCGAATGACCAAAATGCGATTTTTGGC
GGGGATTTAATTTGGCGACTCGGAAGGCTTTAGTCTGTGGTGAACTAAAA
AAAATACGTGGTAATTTACTAAAAAATATTCTCCTTAGAATTTCTATCTT
AAAAAGATTTTATTAAATTTGACGGGGATTTGGTTTGGCGAATTTCCGAT
ATTTGAAATTTTGGCGAGAATTTAATTTGGCGATTTTTGGAAAATTCGCC
AAATTTAATCCATGCCAAAATTTATCCACTTAAGGTAATCGTGAATATAA
TCATCTACAATTAAAAAAAGGTGTATTTGATTTCCATCAATGTCAAAATA
TGTTGGGATTTCGGAAGGGTCGTACCCACGTGACCACTTTTTAATTTTAT
TGATGGACGTGATAGTCCTTTCGTGAGTGCTATCAGAACACTGGTCATTA
TAAAAACCAGGCACGACGGAAGCTTTTTATATCTGGTACGGCGAATGAGG
AAATTTAAGCGATTTTATAGCGATTTGACCGACGAAGAGGAAAACTTCGG
GTATTTTTGTGAAAATCTGGTACGGCGGCCGCCGTACCTGCCGTACCCGT
TGCGTCGTGCCTGAAAACACTGGTCGAGAAGGCTTTAGTCTCTTTTCATT
GTTAAAAGCTTGAGATTACGTACCAAAATCGATTTATTTTGCAAACTTTT
TGATCATGTAATTAGAAAATAGACGATTTCAGCATTTCCTCTTTAACTCA
TTGGATCTTCGACTGGGGGGTAGTGGTTTTCAGGCTATATCCACAGCCTT
ATTGGAGTATTTTTGAGCTTCTCATTTTTGAATTCACTTATTATGATTTG
TGTCATTTTGATTGTTAAACGTTACCAATACAATGAAATTGCTTGTACAT
CATTTGCCCTGAGATTTTAAAATAACATATTTCTTTATATCGTAGCATTT
GAATGACGTTTGCGTACTACGCAATATTGTTCGCCAGCTTCAAACGTCGG
GCCGGGTAAGTTTCCTATTCCTATATTGAATGAATTAATTTCAATCATTT
TCTGATATTATTTTTCCGATGAAGAAAAACAAGGTTTTCTGAAATTGATG
AAAAAATTTATCCAACTATGTTTTCCCAGCTGAACAAAAATTGACAAAGA
AAATTTCCTTAGAACGAACCAGCTTTGATCTTGATTTAAAATTTCAGGGT
GAGATGATTTTGATCAACATTTTTAGCTGGAATACCTATCCCTTCAGGAC
AGTGACTCTGTTTATGATAAATTTAATTTAATCTTTAAATATATTTGATT
GATAGGAAGACAAAAATGAAAGAAGAAGGCTGTTGAGAGATCTTCAGGTA
TATTAATTTTGACTTGTTATAGTATTTGCTCTACAGAAAGAGGTGTGTGA
TATTTACTGCCCGGGGGGGGGGGGGTACTAGGGCAAAATGGGTTACGGGG
ATGCGCCACTGGTCAGCGTACCTTTCTAACCTCCACGAGTCCCACGTAGG
GTCACAAAAACACCAAAATAGAAAAATCAGTCGCTCGTAGGGTGCCTTTT
TTTTTGGAAAAATTGGGGAAAAAGTAGAAAATTTAAGAACATTTTGGAAT
TTCAGTCCCATTTAGGGTGACTTTTTTTGCAAATTTCGGCAAAATAAAAA
AAAACGAGTCCCACGTAGAGTCCATTTTTCGAACCTCAGCGGAGCACCCC
CGTTGGTTGGCAAGGGTAGTACCCGCCCCCCCCCCGGATCTACCGGGGAA
AAGGATGTTTCTCCGAATTTTTTTTCCCAAAGAAGGATAAATTTCAGCAT
GAACATATAAACGACTGGACATCCATCTCCTTTGTCTTTTTGTAGAAAAG
GCTGCTAGCTTCGTTGCCGCCTCGTTAAAAGCATAAGATGAAACAATAGA
TTTTGATGATATACCACTTGTGAATACCTTGCTAACAACGTCAAAACTTC
GACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCGTTTATCTATATCAT
AACAAAGATAACAGAGGCAAAATCATCGTTAGCTTGTCAAAACTCCGACT
AATATTTCTAAATTTTGACTTAAAAGTGTCTAATAATTTTAGAGAGTGTC
ACATTCTAATTTCGATTTTCTTATGAAACAGGCTCTCAACTTTGGCAAGC
TATTTTTTTAAAGTCACAAAAAAAATTATTTGAGTGACAAAAGGGATTCA
AAAGTATACACGCAGTTGAAGTTCTGCATTTTAGAGTTGACAATGTTGAT
AAAATATATTGCAAACTTGTGAAAAAATTCGAAAATAATTTTTTTGTACA
TTAGGAGTAATTTTCAAGCTCTATCAATCCTTTTACCTAAATAATTCAAA
GAAATAAAATTATGACGGAATATTGTCGGATTTTTCATACCAATTTTGAA
ATACAGGCGGCAACGAAGCTCGCTTCAAAGAGACAATAAAAGATAGACGT
CCAGTCGTTTATATGTTCATGGGTTCAGCAAACGTCGCCAGGTTTCCAGG
CTAGTGTCAAGTTTATCGTTTTCTTAGTTCATTTTTCCATGTCTAAATCT
GAGAAAATATAAATTGTCTACATACTTTTGAGACACTATTTAATGTTTTT
TCACGCATTGGTTTCAGGACGAGAGGACGATAAGGAGAAATCTGGAGGTT
GAGGTACGTGTATAATTTTTATTACACCCCTGTCTCAGTGCCCCGGTAGA
ACTTTTTTTCCCCAGTGGAGATGAAAATTTCTATCAAAATGCCAATGGGG
ATAGAAAATCTATTGTTTCCAGCTCGAAAATTCCAGTGGGGATGGTTTTG
GAGTGCAATTTTTTACATTCAGTTTTCAATGGGGATAAAATCATAGAGCA
ATTTCGCAGTGGGGTTTTCAAGTTGTAGGATATTTTTTCCACCGGGGACG
ATTTTTTGGCCTGTTTTTCCACCGGGGTGGGTCCACCGGGTCTGTGACAC
AGGGGTGTTTTATTAAATGTTACTGACCAAAGTAATCATGGAAGGGTTTG
AATCATAACTGTATTTTTGTCTCGATTTTGAGACAAATTTAGTATTTATA
ATTGTCTTGTAATTTCATTTCGTTTGTTGATTTCAGCATGAAATGACGAT
CACAGATATGAGGAGAGAA Coding sequence (CDS) from alignment at sc0000006_pilon:2965841..2973009- >XLOC_040413 ID=XLOC_040413|Name=XLOC_040413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=822bp|location=Sequence derived from alignment at sc0000006_pilon:2965841..2973009- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCCAACAACGTCCTCAAATATTTGCTTTGCCACCACCACCACCCCA
ACCACCACTACCACCGCAGCACCGACAACCTCCACTACGACAATCTCCAT
CACGACAACCTCCACCACGACAACCTCCACCACCACCACTTCAACCTCCA
CCATTTTTTCGTCCCCTGATGGAATTACCGCCCCCACCACCTCCTCTGCC
ACCAGTTGGAATATATGGTTTACACCATATTAATGTTGATATGGCCCAAC
AACGTCCTCAAATATTTGCTTTGCCACCACCACCACCCCAACCACCACTA
CCACCGCAGCACCGACAACCTCCACTACGACAATCTCCATCACGACAACC
TCCACCACGACAACCTCCACCACCACCACTTCAACCTCCACCATTTTTTC
GTCCCCTGATGGAATTACCGCCCCCACCACCTCCTCTGCCACCAGTTGGA
ATATATGGTTTACACCATATTAATGTTGATCATTTGAATGACGTTTGCGT
ACTACGCAATATTGTTCGCCAGCTTCAAACGTCGGGCCGGCATTTGAATG
ACGTTTGCGTACTACGCAATATTGTTCGCCAGCTTCAAACGTCGGGCCGG
GAAGACAAAAATGAAAGAAGAAGGCTGTTGAGAGATCTTCAGGAAGACAA
AAATGAAAGAAGAAGGCTGTTGAGAGATCTTCAGGACGAGAGGACGATAA
GGAGAAATCTGGAGGTTGAGGACGAGAGGACGATAAGGAGAAATCTGGAG
GTTGAGCATGAAATGACGATCACAGATATGAGGAGAGAACATGAAATGAC
GATCACAGATATGAGGAGAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:2965841..2973009 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 379-411:34 |
| Aaloc | 343-378:503 |
| Aaloc | 301-342:1815 |
| Aaloc | 241-300:2175 |
| Aaloc | 1-240:7170 |
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