XLOC_040338 (mRNA) -

Overview
NameXLOC_040338
Unique NameXLOC_040338
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000011_pilon:785306..786169+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040338 ID=XLOC_040338|Name=XLOC_040338|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=864bp|location=Sequence derived from alignment at sc0000011_pilon:785306..786169+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGAATGCTGAGAATCAACCCAACAACGCAGAGGGCGGTGCACAGGGTGA AACAAATAACGGAACGGGTGCTAATGGCGGTACTGGAAATTCCCCGCAAG GCGTAGTTACAGAGGACGGCCAAAGGGTGAGAGAAATTTCTACTAATGAG AATGGGAACCgtgtttttgtattttcgggTGAAGGACAATTCGTGCAAAT GGTACGTGACTTTATTCACCAAGTACATGAAAGAGTAAATGTCGGAGTCA CCGGGAATACGGAACAACCAGAAACTCTGAATAATGCTACGGAAGGAGCC GAGTCATCTGAAAATACCGGAACAGCTTCAGTATCAGTACCTGAGAACCC TCGGGTAGAAAACGATAATGAATTTCATTACGGGCCGACTCAAATACGAC CGGAACTAGACGTCCGGGTTAGATCGGTAGCGGATGGTGACGATTTTTCA GCCTTCGTAGAAACCGTCTCATCGGCTACTCAAGTTGATTCTCGGGGAAC GGCATCAGAGGACGGTAGTGTCCGTCAACACACGACACCGGAAATTCACG CAGAACAAATCTACCAGCAAGTACAATCGTTGCAGCATAATCTTGGCCAG ATTaaaatgcaaagccgacaaacaaatacgaatattgaaaaaaataaaga cccaaaaaacgaaaaggagctatggactaaaaaaGAACCTAATTTAATGG GTCAATCTACAAGTTGTCCTACTAACCAGACTACTATTAATAGCGAACAT GAGCTGGTAAGTGTAAACCGGACTTTAAATGACACCGCAGAACATGTGTT ATTAGACTCAGAAAGGACATTTGAAACAAATTCAATATCTACTTTCGATT CGTCAGAATCTTGA

Coding sequence (CDS) from alignment at sc0000011_pilon:785306..786169+

>XLOC_040338 ID=XLOC_040338|Name=XLOC_040338|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1728bp|location=Sequence derived from alignment at sc0000011_pilon:785306..786169+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGAATGCTGAGAATCAACCCAACAACGCAGAGGGCGGTGCACAGGGTGA
AACAAATAACGGAACGGGTGCTAATGGCGGTACTGGAAATTCCCCGCAAG
GCGTAGTTACAGAGGACGGCCAAAGGGTGAGAGAAATTTCTACTAATGAG
AATGGGAACCgtgtttttgtattttcgggTGAAGGACAATTCGTGCAAAT
GGTACGTGACTTTATTCACCAAGTACATGAAAGAGTAAATGTCGGAGTCA
CCGGGAATACGGAACAACCAGAAACTCTGAATAATGCTACGGAAGGAGCC
GAGTCATCTGAAAATACCGGAACAGCTTCAGTATCAGTACCTGAGAACCC
TCGGGTAGAAAACGATAATGAATTTCATTACGGGCCGACTCAAATACGAC
CGGAACTAGACGTCCGGGTTAGATCGGTAGCGGATGGTGACGATTTTTCA
GCCTTCGTAGAAACCGTCTCATCGGCTACTCAAGTTGATTCTCGGGGAAC
GGCATCAGAGGACGGTAGTGTCCGTCAACACACGACACCGGAAATTCACG
CAGAACAAATCTACCAGCAAGTACAATCGTTGCAGCATAATCTTGGCCAG
ATTaaaatgcaaagccgacaaacaaatacgaatattgaaaaaaataaaga
cccaaaaaacgaaaaggagctatggactaaaaaaGAACCTAATTTAATGG
GTCAATCTACAAGTTGTCCTACTAACCAGACTACTATTAATAGCGAACAT
GAGCTGGTAAGTGTAAACCGGACTTTAAATGACACCGCAGAACATGTGTT
ATTAGACTCAGAAAGGACATTTGAAACAAATTCAATATCTACTTTCGATT
CGTCAGAATCTTGACAGAATGCTGAGAATCAACCCAACAACGCAGAGGGC
GGTGCACAGGGTGAAACAAATAACGGAACGGGTGCTAATGGCGGTACTGG
AAATTCCCCGCAAGGCGTAGTTACAGAGGACGGCCAAAGGGTGAGAGAAA
TTTCTACTAATGAGAATGGGAACCgtgtttttgtattttcgggTGAAGGA
CAATTCGTGCAAATGGTACGTGACTTTATTCACCAAGTACATGAAAGAGT
AAATGTCGGAGTCACCGGGAATACGGAACAACCAGAAACTCTGAATAATG
CTACGGAAGGAGCCGAGTCATCTGAAAATACCGGAACAGCTTCAGTATCA
GTACCTGAGAACCCTCGGGTAGAAAACGATAATGAATTTCATTACGGGCC
GACTCAAATACGACCGGAACTAGACGTCCGGGTTAGATCGGTAGCGGATG
GTGACGATTTTTCAGCCTTCGTAGAAACCGTCTCATCGGCTACTCAAGTT
GATTCTCGGGGAACGGCATCAGAGGACGGTAGTGTCCGTCAACACACGAC
ACCGGAAATTCACGCAGAACAAATCTACCAGCAAGTACAATCGTTGCAGC
ATAATCTTGGCCAGATTaaaatgcaaagccgacaaacaaatacgaatatt
gaaaaaaataaagacccaaaaaacgaaaaggagctatggactaaaaaaGA
ACCTAATTTAATGGGTCAATCTACAAGTTGTCCTACTAACCAGACTACTA
TTAATAGCGAACATGAGCTGGTAAGTGTAAACCGGACTTTAAATGACACC
GCAGAACATGTGTTATTAGACTCAGAAAGGACATTTGAAACAAATTCAAT
ATCTACTTTCGATTCGTCAGAATCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040338XLOC_040338-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011_pilongenomesc0000011_pilon:785306..786169 +
Properties
Property NameValue
Aaloc448-867:445
Aaloc1-444:1