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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:2674892..2677488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040155 ID=XLOC_040155|Name=XLOC_040155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2597bp|location=Sequence derived from alignment at sc0000012_pilon:2674892..2677488+ (Clytia hemisphaerica_ch_hm2_pilon)
TTggcaaagaaatttgaaggtAGAGACGATATTGAATGTCCCTCTTGTAG
TACCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGAC
TCATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAAC
AGTAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAGG
TAGCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGTC
CGATACCTGCTACGGTCGAACAAGCTACCTTGAAgattttgaaacataaa
atcGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAAG
GGTaagctaaaaaaatttttatttcgtaAAAATATGTACCTAGCCTTTTG
TGCATTGTCTAAGGAAAGAGGTTTTGCTAATTTTCGAAGTcatttaaaat
atgaaaaaaaaaatcctttttttcagCCTCGAGTATTCATGTCAACACCG
AAACCTGTGAAGCCAACAGCGGAATGTTCTTCTCGTCACCAACGCCGCCG
AAATAAAGGCATTAGAAAGTCTATTGAGTTTGCGTCGAAGACGACTATTT
CCAAACAGATGGCATCACTATCTAAATTCCTTCCTAAAAATCAACGAAAA
GATTTCCTGGAGGAAATTGGTTTTGGTCGGATTGAGATTGACGAGaaaaa
aaTGCTCTCCCTTAAAATCAGTCTTGGAATGCCTtgggaaaagttgaaaa
agataGGAAGGTACAGTACCTGGATATCTTTAtctttttaacaaataaaa
aacgcAACTGAGGTGCTTCTCAAAAGGTTGAGCTACGAATTGGTGctaaa
aagaaatttctaaattgtgaagcaataaatattttcaaaattaaaaagaa
aatattctatatattaagttaaatatttcattttgtttaaGGTTTCTTAG
CCAACACAATATCAAAACTGGTGGGCCACCAAATGCGAAATTTGCACAAA
GAACTGCGTGGTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAAGAA
AATCAGCAAAagcaaatttgttttaaatgaaGTGCCTGGGGCTACATAGA
GGATTTGAAATCACACGTCCTCGAAAGAATCGACTTAATTGACGAGTAAA
ATACTACTACCACTTTATTAAGATATGATGGTTTGTTTTAACAAAATTCT
ATTCGGCTAATTCACTCCTTCTCCTTGATAAATCCAATAATAAATTActa
ttcacaaaaaaaattaaaatattttctttactgTTCAGGGCAAAAGAATT
GAAGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCGGGGAAG
AACCATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAACCGAGA
TTCACCAAACAGTAAAGAAAATACAGTCatattcaattattttgaagaaa
aagaccaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAGAACAA
ATCGACGACCTTCAAAAAGTCCAGTTGGAAGTGAGTGTTTACAATATTGA
TCTGAAAATTCTTTTGCAAGCAATGAAATAGCTAAAACTAATCTAGATTA
CTGTGGGCttgtaattgtttttgtttaattAATTGTGAAgttgtcttttc
tttttcagtgacAAAAAGATTCGTATGTTTTTGATGGGGGACTACGAGTT
CCTGTGTAATGCATATGGCATTAGTGGAGCAAGTGGtaaatatatgaaat
acgtattataaatatatttatataatatgatacttgatagataatgaaaa
atgaaatatacatacagcaaagtaatataatacCTAGTAAATCTTCCAGT
ATTATTATCAACTGCTTAGCTTAGCTAAGATTGTACCTTATCTTGGGAAA
ATAAAGTTGGGATTTGTTTTGGCCAAAGAAGTTTCACATTTAAAATTTAC
TCTTTTCAGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGAAGAG
ATTCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAAAGAC
ACTTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCGAAAG
CTAAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACCTCTG
ACACAggtattgaattgaaaaaacacttTGATTCATTATATTCACCAATA
ATATTCCACTTATTTGGTCCAATCAAAATTCACATGAACAATAGTGGAAC
TTAATGAAACAACTTTTCTAATCTTTCAGGTTTCAATCCCTGCTTTACAC
ATTTCGTTGGGCACATACAAGAAATTTTTCGACCTTTTGGAAGAATACTG
TTACCAGCTGGACTTTATGATCGCAGGTTCGACAAGTCAAGCAGATGGAT
TAGAACGGTCCAAAATTGACAAACTTGGTGAAACGTGGCAGGAAATCACT
CTTTTACGGCAACAGATTCGGGATCTTGATCGCACCATCAATTTGGTTCA
TGATGCCATTGCTCAAAACATTGCCAAAGATCCTGCACACGAGAAAGAAA
TAAGAGCTGTTTATGAACCCCGTCTGTTACACTTGTCTGACTTGGTT Coding sequence (CDS) from alignment at sc0000012_pilon:2674892..2677488+ >XLOC_040155 ID=XLOC_040155|Name=XLOC_040155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3346bp|location=Sequence derived from alignment at sc0000012_pilon:2674892..2677488+ (Clytia hemisphaerica_ch_hm2_pilon)
TTggcaaagaaatttgaaggtAGAGACGATATTGAATGTCCCTCTTGTAG
TACCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGAC
TCATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAAC
AGTAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAGG
TAGCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGTC
CGATACCTGCTACGGTCGAACAAGCTACCTTGAAgattttgaaacataaa
atcGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAAG
GTTggcaaagaaatttgaaggtAGAGACGATATTGAATGTCCCTCTTGTA
GTACCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGA
CTCATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAA
CAGTAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAG
GTAGCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGT
CCGATACCTGCTACGGTCGAACAAGCTACCTTGAAgattttgaaacataa
aatcGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAA
GGCCTCGAGTATTCATGTCAACACCGAAACCTGTGAAGCCAACAGCGGAA
TGTTCTTCTCGTCACCAACGCCGCCGAAATAAAGGCATTAGAAAGTCTAT
TGAGTTTGCGTCGAAGACGACTATTTCCAAACAGATGGCATCACTATCTA
AATTCCTTCCTAAAAATCAACGAAAAGATTTCCTGGAGGAAATTGGTTTT
GGTCGGATTGAGATTGACGAGaaaaaaaTGCTCTCCCTTAAAATCAGTCT
TGGAATGCCTtgggaaaagttgaaaaagataGGAAGCCTCGAGTATTCAT
GTCAACACCGAAACCTGTGAAGCCAACAGCGGAATGTTCTTCTCGTCACC
AACGCCGCCGAAATAAAGGCATTAGAAAGTCTATTGAGTTTGCGTCGAAG
ACGACTATTTCCAAACAGATGGCATCACTATCTAAATTCCTTCCTAAAAA
TCAACGAAAAGATTTCCTGGAGGAAATTGGTTTTGGTCGGATTGAGATTG
ACGAGaaaaaaaTGCTCTCCCTTAAAATCAGTCTTGGAATGCCTtgggaa
aagttgaaaaagataGGAAGGTTTCTTAGCCAACACAATATCAAAACTGG
TGGGCCACCAAATGCGAAATTTGCACAAAGAACTGCGTGGTAGTGGCTGG
TGTGTTAAAACCGGTTCATTTATGAAGAAAATCAGCAAAagcaaatttgt
tttaaatgaaGTGCCTGGGGCTACATAGAGGATTTGAAATCACACGTCCT
CGAAAGAATCGACTTAATTGACGAGTTTCTTAGCCAACACAATATCAAAA
CTGGTGGGCCACCAAATGCGAAATTTGCACAAAGAACTGCGTGGTAGTGG
CTGGTGTGTTAAAACCGGTTCATTTATGAAGAAAATCAGCAAAagcaaat
ttgttttaaatgaaGTGCCTGGGGCTACATAGAGGATTTGAAATCACACG
TCCTCGAAAGAATCGACTTAATTGACGAGGCAAAAGAATTGAAGTTTGAA
GAGTTTATGAAAGATGAAGTGCATGTGAAAATCGGGGAAGAACCATGGTG
GTAACACAGGAAAGGCCTGTTATGAGATTTGTAACCGAGATTCACCAAAC
AGTAAAGAAAATACAGTCatattcaattattttgaagaaaaagaccaTCC
ACTCAACTTGAAAATAGCCTTATCACGATTTAAAGAACAAATCGACGACC
TTCAAAAAGTCCAGTTGGAAGGCAAAAGAATTGAAGTTTGAAGAGTTTAT
GAAAGATGAAGTGCATGTGAAAATCGGGGAAGAACCATGGTGGTAACACA
GGAAAGGCCTGTTATGAGATTTGTAACCGAGATTCACCAAACAGTAAAGA
AAATACAGTCatattcaattattttgaagaaaaagaccaTCCACTCAACT
TGAAAATAGCCTTATCACGATTTAAAGAACAAATCGACGACCTTCAAAAA
GTCCAGTTGGAAtgacAAAAAGATTCGTATGTTTTTGATGGGGGACTACG
AGTTCCTGTGTAATGCATATGGCATTAGTGGAGCAAGTGtgacAAAAAGA
TTCGTATGTTTTTGATGGGGGACTACGAGTTCCTGTGTAATGCATATGGC
ATTAGTGGAGCAAGTGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAA
GGAAGAGATTCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTC
TAAAGACACTTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTG
TCGAAAGCTAAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACAT
ACCTCTGACACAgGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGA
AGAGATTCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAA
AGACACTTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCG
AAAGCTAAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACC
TCTGACACAgGTTTCAATCCCTGCTTTACACATTTCGTTGGGCACATACA
AGAAATTTTTCGACCTTTTGGAAGAATACTGTTACCAGCTGGACTTTATG
ATCGCAGGTTCGACAAGTCAAGCAGATGGATTAGAACGGTCCAAAATTGA
CAAACTTGGTGAAACGTGGCAGGAAATCACTCTTTTACGGCAACAGATTC
GGGATCTTGATCGCACCATCAATTTGGTTCATGATGCCATTGCTCAAAAC
ATTGCCAAAGATCCTGCACACGAGAAAGAAATAAGAGCTGTTTATGAACC
CCGTCTGTTACACTTGTCTGACTTGGTTGTTTCAATCCCTGCTTTACACA
TTTCGTTGGGCACATACAAGAAATTTTTCGACCTTTTGGAAGAATACTGT
TACCAGCTGGACTTTATGATCGCAGGTTCGACAAGTCAAGCAGATGGATT
AGAACGGTCCAAAATTGACAAACTTGGTGAAACGTGGCAGGAAATCACTC
TTTTACGGCAACAGATTCGGGATCTTGATCGCACCATCAATTTGGTTCAT
GATGCCATTGCTCAAAACATTGCCAAAGATCCTGCACACGAGAAAGAAAT
AAGAGCTGTTTATGAACCCCGTCTGTTACACTTGTCTGACTTGGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:2674892..2677488 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1357-1674:2280 |
| Aaloc | 1162-1356:1962 |
| Aaloc | 1084-1158:1660 |
| Aaloc | 1069-1080:1517 |
| Aaloc | 907-1068:1354 |
| Aaloc | 844-906:1290 |
| Aaloc | 784-840:1087 |
| Aaloc | 676-780:980 |
| Aaloc | 667-672:974 |
| Aaloc | 637-666:943 |
| Aaloc | 352-633:477 |
| Aaloc | 1-351:1 |
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