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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000290_pilon:276522..279260+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040079 ID=XLOC_040079|Name=XLOC_040079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2739bp|location=Sequence derived from alignment at sc0000290_pilon:276522..279260+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGAATTCTTTCTTGGTTTGCATTATGATGTTTTGGAGAGTGACGC
TAAAGTATTAACTTTAAACAAACGTCGTAAAAAGATTCGATATTCGTTAC
ATCAGATGACACCACAACCTACCAAAGTTAAATCGTCCTATAATTTGCGA
AAGTTGATCGAATTACCTCAATGTGTGATCAGAAATGGTAACGAAAAAGT
ATTGTTCAACcagttatttttcaattttgattggaTTCACCAGAAATTAT
TGGGAACTGGGATTAAACAAATCATCGATGATTATGACTCATTCCTCCGA
AAATACGATTCATTCGAAGTCCAATACATCCGAAATTCATTGGCACTAGA
ATCAATACGTATCGCTAAGAATAAAAGCACTTTTTATAACATCTTACTTC
GTATACTAGAGAATGtagattttacaaaatttccaaACTTGAAGAAACTT
TATGACGGCGTTCAGTCTTTcgtgaaatcttcaaaatcaccTATCCTTTA
CTACCAGGACCAGACATTGATACCAAAACAAGCACCACGTATTTTATCAG
CCATCAAGCAACCGGGATCCGTCATATTCGTTAAATTCCTGACATCTACG
TCTCATAAACGTGCTGTATGCAtatcatcaaaacataacaaaatcTTCGT
CACTTTTTACGGACTTATCAAACAGCAGTTATTATCTTGCTTGGTCATAC
CGGCTGAAATAACCAAGCCTCGAATCCATGTATCTAAATTCACATCAATT
CTAGTCATCGCGTTACACGACTTACATATCATCAATACAAAACAAATGAG
AGAAGTATGTACCGTTGCTAGTGAACCTCAAGGAACCATCAAATGTATTC
AAGAAAATTTGACAGGTAGTCATTTAGCTATCGTTTACGACACAGGTGTT
GTACGACTCATAGAACTCAAATCCTTTAAAATCACAGCTGAAATCGAGAC
GGTGGGTACTTCAACTGAGAACTGTTACTTTATCAATGAGTCGTCTCTCT
ATCTTCTTCTTGCTCCTTTCAAAGGACCAACCTTAGCTATCATCGATTGT
CAAAAATCAACCGTAGAACAGTTGAGTTTAGCAAAGCTCGATCATTTGAC
AGCGGAAAGTCCAACTATTTTCAATCAAGTTACCAGTGTGTTGATCAGTG
CTTCAAAATGTGATATTCATTCATGGAACATCAAAACAAGATCATTTTTC
ACTTATTACGGACATTCTGGAGAAATCACATGTCTTACTGTTATGAATGG
TGAATATTTTGCATCTGGTAGTCAAACAGGCGAGATCAGAATCTGGAGCC
TTGCTAAAGAAGCAATGATACAAAGCCTTGAAGGACATTACGATAGTGTA
CTATCAATGCAATGTAACTTGGAGGCTAACATTCTGGTTAGCTCTGGCAA
TGATGATTTGATCATGGTGTGGGATCTTGAAGTGTATTCGTTAAGAGATT
CTTGTACGGTGAATCGAATGGTGGCTTTTGATACCAGTGGTACAGATTCT
ATAGCTTTGGTTGGATCCAAGGATGATTATGCTCGAGTTCTTGAACTCTC
CCAAGATGTGATTGATTTGAGCAGTCGAAATACGTTAAGCACATGTACTT
ATTTAGCTGTCAGTCCAACCACTGAACATGCTTTGATAACACAGAATTCC
AACAATTTAGTTCTATGGGATTTAACTGAGAATTCATCCCAGTGGGAATA
CAAAGGTGAAGTCAGGTGTACTTGCTTTCCTACTGCAACTCATTTCTTTG
TTGGAACACCAGACGGGAATTTACATATCGGGAAGATTGAGAAAAAAGGA
CGGACAAACATCGTGCATAAATTGAGTGATTCGAGTATTTGtttattgaa
acattttcatGACAACGCActattggtttgttttgatgatggcaccattt
tgaattttgattataCTGACCGATCTGTTCAGCAAACTACACAGCCGCAT
AATGACATAATCACGTGTGCAGAAATCAGCGAAAGGCACGTTGCATTTGG
TAGTCAAGACCATCGTATCTCTCTGTTTGCAAGAGAGGGAGCCAAAATGA
GTTTACTTCATATATGTACAACTGATTCTACCATTGAGCATTTAGTTTTA
ATGAAAAACTCTGTACATTTAGTATCTGGCAAACAGTCTGGATTCAATGT
TTGGGATATCGAGAGTGGTAAAGAAATTGAGGACATGGCTTTTAACATTA
AAGGTATCAATGTAATGCTATGTAACAAATTATCTGGCAATCTGGTTATC
GGCACCAATACTGAACGTCGTCAGTTTCTGGAAATGAATTATCAGCAACC
AGGTCAAATCAAGTATTATAAAGGACATAAAGATGGTATTTCTTGTATAC
GAATCACTGGCAATCTGAAGTATATTTTGACTGGTTCTTTCGATGGATGT
TTGAGAATATGGGGCAACGAGACCAAGAAATTGATTGATTCCATTCAACT
GCAATCTAAAATAAACGATCTGGTGGTGACAGATCTGATGGAGAATTGGT
ATCATCGAATTTATGTGGTGACATGCTCCAGAACATTGGTGGTTCTACAT
TTCTTGGTAACTTCAAGGAAACAAAGTCAACGTTTATCCACAAATACGAC
AGGACATTTGATTATGTTGAATAACGTGGATGAGGTCGACAATCCTCAAC
AGAATGGAAATACTCCACGTCTAGCGAAAAATGATGAATTGATTCAattc
aaaaatggaaaatcgAACGGTTGTTGTCTGATATGTTAG Coding sequence (CDS) from alignment at sc0000290_pilon:276522..279260+ >XLOC_040079 ID=XLOC_040079|Name=XLOC_040079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5478bp|location=Sequence derived from alignment at sc0000290_pilon:276522..279260+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGAATTCTTTCTTGGTTTGCATTATGATGTTTTGGAGAGTGACGC
TAAAGTATTAACTTTAAACAAACGTCGTAAAAAGATTCGATATTCGTTAC
ATCAGATGACACCACAACCTACCAAAGTTAAATCGTCCTATAATTTGCGA
AAGTTGATCGAATTACCTCAATGTGTGATCAGAAATGGTAACGAAAAAGT
ATTGTTCAACcagttatttttcaattttgattggaTTCACCAGAAATTAT
TGGGAACTGGGATTAAACAAATCATCGATGATTATGACTCATTCCTCCGA
AAATACGATTCATTCGAAGTCCAATACATCCGAAATTCATTGGCACTAGA
ATCAATACGTATCGCTAAGAATAAAAGCACTTTTTATAACATCTTACTTC
GTATACTAGAGAATGtagattttacaaaatttccaaACTTGAAGAAACTT
TATGACGGCGTTCAGTCTTTcgtgaaatcttcaaaatcaccTATCCTTTA
CTACCAGGACCAGACATTGATACCAAAACAAGCACCACGTATTTTATCAG
CCATCAAGCAACCGGGATCCGTCATATTCGTTAAATTCCTGACATCTACG
TCTCATAAACGTGCTGTATGCAtatcatcaaaacataacaaaatcTTCGT
CACTTTTTACGGACTTATCAAACAGCAGTTATTATCTTGCTTGGTCATAC
CGGCTGAAATAACCAAGCCTCGAATCCATGTATCTAAATTCACATCAATT
CTAGTCATCGCGTTACACGACTTACATATCATCAATACAAAACAAATGAG
AGAAGTATGTACCGTTGCTAGTGAACCTCAAGGAACCATCAAATGTATTC
AAGAAAATTTGACAGGTAGTCATTTAGCTATCGTTTACGACACAGGTGTT
GTACGACTCATAGAACTCAAATCCTTTAAAATCACAGCTGAAATCGAGAC
GGTGGGTACTTCAACTGAGAACTGTTACTTTATCAATGAGTCGTCTCTCT
ATCTTCTTCTTGCTCCTTTCAAAGGACCAACCTTAGCTATCATCGATTGT
CAAAAATCAACCGTAGAACAGTTGAGTTTAGCAAAGCTCGATCATTTGAC
AGCGGAAAGTCCAACTATTTTCAATCAAGTTACCAGTGTGTTGATCAGTG
CTTCAAAATGTGATATTCATTCATGGAACATCAAAACAAGATCATTTTTC
ACTTATTACGGACATTCTGGAGAAATCACATGTCTTACTGTTATGAATGG
TGAATATTTTGCATCTGGTAGTCAAACAGGCGAGATCAGAATCTGGAGCC
TTGCTAAAGAAGCAATGATACAAAGCCTTGAAGGACATTACGATAGTGTA
CTATCAATGCAATGTAACTTGGAGGCTAACATTCTGGTTAGCTCTGGCAA
TGATGATTTGATCATGGTGTGGGATCTTGAAGTGTATTCGTTAAGAGATT
CTTGTACGGTGAATCGAATGGTGGCTTTTGATACCAGTGGTACAGATTCT
ATAGCTTTGGTTGGATCCAAGGATGATTATGCTCGAGTTCTTGAACTCTC
CCAAGATGTGATTGATTTGAGCAGTCGAAATACGTTAAGCACATGTACTT
ATTTAGCTGTCAGTCCAACCACTGAACATGCTTTGATAACACAGAATTCC
AACAATTTAGTTCTATGGGATTTAACTGAGAATTCATCCCAGTGGGAATA
CAAAGGTGAAGTCAGGTGTACTTGCTTTCCTACTGCAACTCATTTCTTTG
TTGGAACACCAGACGGGAATTTACATATCGGGAAGATTGAGAAAAAAGGA
CGGACAAACATCGTGCATAAATTGAGTGATTCGAGTATTTGtttattgaa
acattttcatGACAACGCActattggtttgttttgatgatggcaccattt
tgaattttgattataCTGACCGATCTGTTCAGCAAACTACACAGCCGCAT
AATGACATAATCACGTGTGCAGAAATCAGCGAAAGGCACGTTGCATTTGG
TAGTCAAGACCATCGTATCTCTCTGTTTGCAAGAGAGGGAGCCAAAATGA
GTTTACTTCATATATGTACAACTGATTCTACCATTGAGCATTTAGTTTTA
ATGAAAAACTCTGTACATTTAGTATCTGGCAAACAGTCTGGATTCAATGT
TTGGGATATCGAGAGTGGTAAAGAAATTGAGGACATGGCTTTTAACATTA
AAGGTATCAATGTAATGCTATGTAACAAATTATCTGGCAATCTGGTTATC
GGCACCAATACTGAACGTCGTCAGTTTCTGGAAATGAATTATCAGCAACC
AGGTCAAATCAAGTATTATAAAGGACATAAAGATGGTATTTCTTGTATAC
GAATCACTGGCAATCTGAAGTATATTTTGACTGGTTCTTTCGATGGATGT
TTGAGAATATGGGGCAACGAGACCAAGAAATTGATTGATTCCATTCAACT
GCAATCTAAAATAAACGATCTGGTGGTGACAGATCTGATGGAGAATTGGT
ATCATCGAATTTATGTGGTGACATGCTCCAGAACATTGGTGGTTCTACAT
TTCTTGGTAACTTCAAGGAAACAAAGTCAACGTTTATCCACAAATACGAC
AGGACATTTGATTATGTTGAATAACGTGGATGAGGTCGACAATCCTCAAC
AGAATGGAAATACTCCACGTCTAGCGAAAAATGATGAATTGATTCAattc
aaaaatggaaaatcgAACGGTTGTTGTCTGATATGTTAGATGTCTGAATT
CTTTCTTGGTTTGCATTATGATGTTTTGGAGAGTGACGCTAAAGTATTAA
CTTTAAACAAACGTCGTAAAAAGATTCGATATTCGTTACATCAGATGACA
CCACAACCTACCAAAGTTAAATCGTCCTATAATTTGCGAAAGTTGATCGA
ATTACCTCAATGTGTGATCAGAAATGGTAACGAAAAAGTATTGTTCAACc
agttatttttcaattttgattggaTTCACCAGAAATTATTGGGAACTGGG
ATTAAACAAATCATCGATGATTATGACTCATTCCTCCGAAAATACGATTC
ATTCGAAGTCCAATACATCCGAAATTCATTGGCACTAGAATCAATACGTA
TCGCTAAGAATAAAAGCACTTTTTATAACATCTTACTTCGTATACTAGAG
AATGtagattttacaaaatttccaaACTTGAAGAAACTTTATGACGGCGT
TCAGTCTTTcgtgaaatcttcaaaatcaccTATCCTTTACTACCAGGACC
AGACATTGATACCAAAACAAGCACCACGTATTTTATCAGCCATCAAGCAA
CCGGGATCCGTCATATTCGTTAAATTCCTGACATCTACGTCTCATAAACG
TGCTGTATGCAtatcatcaaaacataacaaaatcTTCGTCACTTTTTACG
GACTTATCAAACAGCAGTTATTATCTTGCTTGGTCATACCGGCTGAAATA
ACCAAGCCTCGAATCCATGTATCTAAATTCACATCAATTCTAGTCATCGC
GTTACACGACTTACATATCATCAATACAAAACAAATGAGAGAAGTATGTA
CCGTTGCTAGTGAACCTCAAGGAACCATCAAATGTATTCAAGAAAATTTG
ACAGGTAGTCATTTAGCTATCGTTTACGACACAGGTGTTGTACGACTCAT
AGAACTCAAATCCTTTAAAATCACAGCTGAAATCGAGACGGTGGGTACTT
CAACTGAGAACTGTTACTTTATCAATGAGTCGTCTCTCTATCTTCTTCTT
GCTCCTTTCAAAGGACCAACCTTAGCTATCATCGATTGTCAAAAATCAAC
CGTAGAACAGTTGAGTTTAGCAAAGCTCGATCATTTGACAGCGGAAAGTC
CAACTATTTTCAATCAAGTTACCAGTGTGTTGATCAGTGCTTCAAAATGT
GATATTCATTCATGGAACATCAAAACAAGATCATTTTTCACTTATTACGG
ACATTCTGGAGAAATCACATGTCTTACTGTTATGAATGGTGAATATTTTG
CATCTGGTAGTCAAACAGGCGAGATCAGAATCTGGAGCCTTGCTAAAGAA
GCAATGATACAAAGCCTTGAAGGACATTACGATAGTGTACTATCAATGCA
ATGTAACTTGGAGGCTAACATTCTGGTTAGCTCTGGCAATGATGATTTGA
TCATGGTGTGGGATCTTGAAGTGTATTCGTTAAGAGATTCTTGTACGGTG
AATCGAATGGTGGCTTTTGATACCAGTGGTACAGATTCTATAGCTTTGGT
TGGATCCAAGGATGATTATGCTCGAGTTCTTGAACTCTCCCAAGATGTGA
TTGATTTGAGCAGTCGAAATACGTTAAGCACATGTACTTATTTAGCTGTC
AGTCCAACCACTGAACATGCTTTGATAACACAGAATTCCAACAATTTAGT
TCTATGGGATTTAACTGAGAATTCATCCCAGTGGGAATACAAAGGTGAAG
TCAGGTGTACTTGCTTTCCTACTGCAACTCATTTCTTTGTTGGAACACCA
GACGGGAATTTACATATCGGGAAGATTGAGAAAAAAGGACGGACAAACAT
CGTGCATAAATTGAGTGATTCGAGTATTTGtttattgaaacattttcatG
ACAACGCActattggtttgttttgatgatggcaccattttgaattttgat
tataCTGACCGATCTGTTCAGCAAACTACACAGCCGCATAATGACATAAT
CACGTGTGCAGAAATCAGCGAAAGGCACGTTGCATTTGGTAGTCAAGACC
ATCGTATCTCTCTGTTTGCAAGAGAGGGAGCCAAAATGAGTTTACTTCAT
ATATGTACAACTGATTCTACCATTGAGCATTTAGTTTTAATGAAAAACTC
TGTACATTTAGTATCTGGCAAACAGTCTGGATTCAATGTTTGGGATATCG
AGAGTGGTAAAGAAATTGAGGACATGGCTTTTAACATTAAAGGTATCAAT
GTAATGCTATGTAACAAATTATCTGGCAATCTGGTTATCGGCACCAATAC
TGAACGTCGTCAGTTTCTGGAAATGAATTATCAGCAACCAGGTCAAATCA
AGTATTATAAAGGACATAAAGATGGTATTTCTTGTATACGAATCACTGGC
AATCTGAAGTATATTTTGACTGGTTCTTTCGATGGATGTTTGAGAATATG
GGGCAACGAGACCAAGAAATTGATTGATTCCATTCAACTGCAATCTAAAA
TAAACGATCTGGTGGTGACAGATCTGATGGAGAATTGGTATCATCGAATT
TATGTGGTGACATGCTCCAGAACATTGGTGGTTCTACATTTCTTGGTAAC
TTCAAGGAAACAAAGTCAACGTTTATCCACAAATACGACAGGACATTTGA
TTATGTTGAATAACGTGGATGAGGTCGACAATCCTCAACAGAATGGAAAT
ACTCCACGTCTAGCGAAAAATGATGAATTGATTCAattcaaaaatggaaa
atcgAACGGTTGTTGTCTGATATGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290_pilon | genome | sc0000290_pilon:276522..279260 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2739:1 |
|
