|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000204_pilon:76470..79442+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040000 ID=XLOC_040000|Name=XLOC_040000|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2973bp|location=Sequence derived from alignment at sc0000204_pilon:76470..79442+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAACAATCCTTCCAACACAAGATGCATCATCATTTTTCTCTGATCCATC
ATCAACCATACCAAACAAATCTTCTATATCAATATCTCAGACAATATCAT
CAACTGGTTCCATAGAGCTCTATACAGCAAGTGACTACATATCATCATCT
TCTATCATAACAGAGGCTTTAACAGCCAGTTTGATGTCCATGATTGAGCC
TTCTTTATCAAAAACATTGTCCCTTTCACAAAGCTTGGTTCTCAGTGAAA
GTGAATTCAATAATAAAGAGAGCACGCAAACTTCGAAAATCGAAACATTT
TCATTACAAAGCTCAGCTAGCAGTTTTATTCAATCAAACTCAAGCTCTTT
AGtagatatattttcaaattcaatgaaCAATTTTTCTTTACCATCAAGTT
CTGTGTCAGAACAAGTAACTTCCATTTCTATGTCAGACATTTTTGTATCA
AGTATGCTAGAGTCGCAATCAATTCATTCAATGGATGTGTTAATGGAATC
AAAAACTCTCATCATTCCCTCTTCAAGTAGAGTTGACCAAAGTATTGAAA
GTGATATAATACAATCTTCACAAATCCTTCCAATATCAAGCCAATTGAAT
TTAGGAGAGAGTTCAATAGTTGAATCAGTTCAACCAACATCTGGGATTTC
ACCATCAAAAAGTTTAACTTCACAAGAGACAGTCATAAATTCAGTACAAA
GCTCACttttatcaagatttttttcatcaagCACAGAAATTCTACAAGCA
TCTTGTTCATATTTTGTTACTGCTATTACTGAAGTTTGTTTATCACCCAC
ATCATCACTTATTAATAACTTTCCTACTTTCTCCACTTCAATTCATATAC
ATTCGTCAAATATACAGATTGTGAATTCAACCTCAGTAATTGAAGCTTCT
AGTATTCCAGTGACAGGAAACCAATCAATACTGATAAATTCAAACATGAC
TTTTTCACAAATACAAACTTCTATTGAGAGTTCTGGGACGATGTTACCAA
CAAGCATtgagtctagtttttcaacaaattatgcAGATATTCAATCAATT
ACTAATGGCACAACCATGAGTATAGAACTAACATCCAACTTTATTTCAGA
GGATCAATCATCTGCGAATAGTTATTTTGTTGGACATGAATCTTCTATTT
TTAACAATTCATCGGATATAAATCCATCGTCGTCAATTTCACAATCATTG
TCTATAGAGACATCAATACAAACAATATCACCAGTAGCAATATCAATAGG
ATCAACCATCAGTAGAGAAAACCCTGTCCTAAATACATTGTCTTCATCAA
TTATGTCAACTGAATCAATTTTTGGAAACGAATCTTCTATACTAAGTTCA
TCTAATGAAGCTTTGGAATCAAGTAGTTTATCTTCCATTATCGCTGGTGA
TTTTGAATCGGTTTCAGTTTCAACATCGTTAGATCACCAATCAGTTATAT
ACTCATCCTCGGCTATTGCAAAGAGGCGAAGAAGACGTAATGTTAACAAT
GAGATAAACACAACATCATCAGTATCAATGGAGATGTCACAAACTTTACT
AACATCTTTATCAGATAGTTCATCCTTTTCAATACAACCCCAAACTATTT
CACCATTGATAACTAATGATTCAACTGTCACGTCAAATTTAGTGAACTCA
GTCTTACCAACACCAGGATCATCTATAAGACTAAATTCTGAATCGATAAG
TAGTTATCTAAGTGTCTCATCTAGCTTGGATTCAATTATGAATAACACCC
AAAGTGTTTCACCTAGTCTGGATTCAAGCAGTTTAACTACCATTTTACCA
AGTTATGAAATAATGAATGGGACAAGTGCAGTTTCTCCTACTGTAACCAC
AACCgctttgaaaagtgaaattaaTGCAACTGATTTACCAGAGATTTCTC
CATCAACAACGTCCATTGGGGAATTCACACTTTCCAACAGCATCAATGCA
TCATCAATTTTGGACCTGCAACCTCCAGAGACGACAGAGATGATGACTCC
TTTAAATGCTTCTATATCAACAATTTTAGAAGTGCTGGAACCACAGAGCA
CTACATTACCAAATACAACCAAATCATCCCTTGCACTTCAGTCAATGTCA
TCTTCACAGATCTCACCATCAATACAAGGCAGCAGAATGTCTTCACCTCA
AATCTTTCCATCATCCACAAACATTGCATACTGCACCAGATATGTCACTA
CGTCAATTTGTCATGGTCAAAGTCTCAAGACATCAATATATGCCAGTGAA
GGTAAAACATCAACTGATTTTTCATCGATCACGACAATGACAGAAATTTA
CACGACCTTACAATCAATAGAATTAACAGTGACAACAATGATATTGACAT
CATCATTAACAACATATTATAATACATTGACTACAATTGACTTTACAAAA
GGTATAATTTCCACATTACAGATTAGCACAGTTACTCCAGCATTGACAGA
AAGAACACTTTTGACAAACACTGCTTCAAGCACTGAAATAACATTCGCAA
CTACTGCACATACAAACCAAAGTACAATTAACACTCTAAGCACAGCACAC
TTGGCACCAATGACACAACTCCAAAGCACTACAGTAATGACGATCACAAC
AGAACCACTATTGACCACATCACCAGTTTTTATTGCACCTTCTTATGTTT
CATTTACAacacattttattttagtaTCCCAATCACCCACcaccaaaact
tttaaaacatcaGAACTGTTAGCCACACAATCTTTACAACCGCCCACTTC
AACAGTAATTACCACCCAGCCACCAACACCCACAACTGCACCAACAACCA
ATCAAACCCTGGTTGAGCTCACCATCATAGTCAGGGATCAAACAGAGGAT
GTGACTTCCGACACTTTCAAATCTCAAATGGAACGCAGACTTGCAGATAC
TTATGTACGTGCACAAAATATTGCGCAACGTCGCAAGAGAAGAGCTGCAA
CATCTGGCAATATTACAATTGAG Coding sequence (CDS) from alignment at sc0000204_pilon:76470..79442+ >XLOC_040000 ID=XLOC_040000|Name=XLOC_040000|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5946bp|location=Sequence derived from alignment at sc0000204_pilon:76470..79442+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAACAATCCTTCCAACACAAGATGCATCATCATTTTTCTCTGATCCATC
ATCAACCATACCAAACAAATCTTCTATATCAATATCTCAGACAATATCAT
CAACTGGTTCCATAGAGCTCTATACAGCAAGTGACTACATATCATCATCT
TCTATCATAACAGAGGCTTTAACAGCCAGTTTGATGTCCATGATTGAGCC
TTCTTTATCAAAAACATTGTCCCTTTCACAAAGCTTGGTTCTCAGTGAAA
GTGAATTCAATAATAAAGAGAGCACGCAAACTTCGAAAATCGAAACATTT
TCATTACAAAGCTCAGCTAGCAGTTTTATTCAATCAAACTCAAGCTCTTT
AGtagatatattttcaaattcaatgaaCAATTTTTCTTTACCATCAAGTT
CTGTGTCAGAACAAGTAACTTCCATTTCTATGTCAGACATTTTTGTATCA
AGTATGCTAGAGTCGCAATCAATTCATTCAATGGATGTGTTAATGGAATC
AAAAACTCTCATCATTCCCTCTTCAAGTAGAGTTGACCAAAGTATTGAAA
GTGATATAATACAATCTTCACAAATCCTTCCAATATCAAGCCAATTGAAT
TTAGGAGAGAGTTCAATAGTTGAATCAGTTCAACCAACATCTGGGATTTC
ACCATCAAAAAGTTTAACTTCACAAGAGACAGTCATAAATTCAGTACAAA
GCTCACttttatcaagatttttttcatcaagCACAGAAATTCTACAAGCA
TCTTGTTCATATTTTGTTACTGCTATTACTGAAGTTTGTTTATCACCCAC
ATCATCACTTATTAATAACTTTCCTACTTTCTCCACTTCAATTCATATAC
ATTCGTCAAATATACAGATTGTGAATTCAACCTCAGTAATTGAAGCTTCT
AGTATTCCAGTGACAGGAAACCAATCAATACTGATAAATTCAAACATGAC
TTTTTCACAAATACAAACTTCTATTGAGAGTTCTGGGACGATGTTACCAA
CAAGCATtgagtctagtttttcaacaaattatgcAGATATTCAATCAATT
ACTAATGGCACAACCATGAGTATAGAACTAACATCCAACTTTATTTCAGA
GGATCAATCATCTGCGAATAGTTATTTTGTTGGACATGAATCTTCTATTT
TTAACAATTCATCGGATATAAATCCATCGTCGTCAATTTCACAATCATTG
TCTATAGAGACATCAATACAAACAATATCACCAGTAGCAATATCAATAGG
ATCAACCATCAGTAGAGAAAACCCTGTCCTAAATACATTGTCTTCATCAA
TTATGTCAACTGAATCAATTTTTGGAAACGAATCTTCTATACTAAGTTCA
TCTAATGAAGCTTTGGAATCAAGTAGTTTATCTTCCATTATCGCTGGTGA
TTTTGAATCGGTTTCAGTTTCAACATCGTTAGATCACCAATCAGTTATAT
ACTCATCCTCGGCTATTGCAAAGAGGCGAAGAAGACGTAATGTTAACAAT
GAGATAAACACAACATCATCAGTATCAATGGAGATGTCACAAACTTTACT
AACATCTTTATCAGATAGTTCATCCTTTTCAATACAACCCCAAACTATTT
CACCATTGATAACTAATGATTCAACTGTCACGTCAAATTTAGTGAACTCA
GTCTTACCAACACCAGGATCATCTATAAGACTAAATTCTGAATCGATAAG
TAGTTATCTAAGTGTCTCATCTAGCTTGGATTCAATTATGAATAACACCC
AAAGTGTTTCACCTAGTCTGGATTCAAGCAGTTTAACTACCATTTTACCA
AGTTATGAAATAATGAATGGGACAAGTGCAGTTTCTCCTACTGTAACCAC
AACCgctttgaaaagtgaaattaaTGCAACTGATTTACCAGAGATTTCTC
CATCAACAACGTCCATTGGGGAATTCACACTTTCCAACAGCATCAATGCA
TCATCAATTTTGGACCTGCAACCTCCAGAGACGACAGAGATGATGACTCC
TTTAAATGCTTCTATATCAACAATTTTAGAAGTGCTGGAACCACAGAGCA
CTACATTACCAAATACAACCAAATCATCCCTTGCACTTCAGTCAATGTCA
TCTTCACAGATCTCACCATCAATACAAGGCAGCAGAATGTCTTCACCTCA
AATCTTTCCATCATCCACAAACATTGCATACTGCACCAGATATGTCACTA
CGTCAATTTGTCATGGTCAAAGTCTCAAGACATCAATATATGCCAGTGAA
GGTAAAACATCAACTGATTTTTCATCGATCACGACAATGACAGAAATTTA
CACGACCTTACAATCAATAGAATTAACAGTGACAACAATGATATTGACAT
CATCATTAACAACATATTATAATACATTGACTACAATTGACTTTACAAAA
GGTATAATTTCCACATTACAGATTAGCACAGTTACTCCAGCATTGACAGA
AAGAACACTTTTGACAAACACTGCTTCAAGCACTGAAATAACATTCGCAA
CTACTGCACATACAAACCAAAGTACAATTAACACTCTAAGCACAGCACAC
TTGGCACCAATGACACAACTCCAAAGCACTACAGTAATGACGATCACAAC
AGAACCACTATTGACCACATCACCAGTTTTTATTGCACCTTCTTATGTTT
CATTTACAacacattttattttagtaTCCCAATCACCCACcaccaaaact
tttaaaacatcaGAACTGTTAGCCACACAATCTTTACAACCGCCCACTTC
AACAGTAATTACCACCCAGCCACCAACACCCACAACTGCACCAACAACCA
ATCAAACCCTGGTTGAGCTCACCATCATAGTCAGGGATCAAACAGAGGAT
GTGACTTCCGACACTTTCAAATCTCAAATGGAACGCAGACTTGCAGATAC
TTATGTACGTGCACAAAATATTGCGCAACGTCGCAAGAGAAGAGCTGCAA
CATCTGGCAATATTACAATTGAGTCAACAATCCTTCCAACACAAGATGCA
TCATCATTTTTCTCTGATCCATCATCAACCATACCAAACAAATCTTCTAT
ATCAATATCTCAGACAATATCATCAACTGGTTCCATAGAGCTCTATACAG
CAAGTGACTACATATCATCATCTTCTATCATAACAGAGGCTTTAACAGCC
AGTTTGATGTCCATGATTGAGCCTTCTTTATCAAAAACATTGTCCCTTTC
ACAAAGCTTGGTTCTCAGTGAAAGTGAATTCAATAATAAAGAGAGCACGC
AAACTTCGAAAATCGAAACATTTTCATTACAAAGCTCAGCTAGCAGTTTT
ATTCAATCAAACTCAAGCTCTTTAGtagatatattttcaaattcaatgaa
CAATTTTTCTTTACCATCAAGTTCTGTGTCAGAACAAGTAACTTCCATTT
CTATGTCAGACATTTTTGTATCAAGTATGCTAGAGTCGCAATCAATTCAT
TCAATGGATGTGTTAATGGAATCAAAAACTCTCATCATTCCCTCTTCAAG
TAGAGTTGACCAAAGTATTGAAAGTGATATAATACAATCTTCACAAATCC
TTCCAATATCAAGCCAATTGAATTTAGGAGAGAGTTCAATAGTTGAATCA
GTTCAACCAACATCTGGGATTTCACCATCAAAAAGTTTAACTTCACAAGA
GACAGTCATAAATTCAGTACAAAGCTCACttttatcaagatttttttcat
caagCACAGAAATTCTACAAGCATCTTGTTCATATTTTGTTACTGCTATT
ACTGAAGTTTGTTTATCACCCACATCATCACTTATTAATAACTTTCCTAC
TTTCTCCACTTCAATTCATATACATTCGTCAAATATACAGATTGTGAATT
CAACCTCAGTAATTGAAGCTTCTAGTATTCCAGTGACAGGAAACCAATCA
ATACTGATAAATTCAAACATGACTTTTTCACAAATACAAACTTCTATTGA
GAGTTCTGGGACGATGTTACCAACAAGCATtgagtctagtttttcaacaa
attatgcAGATATTCAATCAATTACTAATGGCACAACCATGAGTATAGAA
CTAACATCCAACTTTATTTCAGAGGATCAATCATCTGCGAATAGTTATTT
TGTTGGACATGAATCTTCTATTTTTAACAATTCATCGGATATAAATCCAT
CGTCGTCAATTTCACAATCATTGTCTATAGAGACATCAATACAAACAATA
TCACCAGTAGCAATATCAATAGGATCAACCATCAGTAGAGAAAACCCTGT
CCTAAATACATTGTCTTCATCAATTATGTCAACTGAATCAATTTTTGGAA
ACGAATCTTCTATACTAAGTTCATCTAATGAAGCTTTGGAATCAAGTAGT
TTATCTTCCATTATCGCTGGTGATTTTGAATCGGTTTCAGTTTCAACATC
GTTAGATCACCAATCAGTTATATACTCATCCTCGGCTATTGCAAAGAGGC
GAAGAAGACGTAATGTTAACAATGAGATAAACACAACATCATCAGTATCA
ATGGAGATGTCACAAACTTTACTAACATCTTTATCAGATAGTTCATCCTT
TTCAATACAACCCCAAACTATTTCACCATTGATAACTAATGATTCAACTG
TCACGTCAAATTTAGTGAACTCAGTCTTACCAACACCAGGATCATCTATA
AGACTAAATTCTGAATCGATAAGTAGTTATCTAAGTGTCTCATCTAGCTT
GGATTCAATTATGAATAACACCCAAAGTGTTTCACCTAGTCTGGATTCAA
GCAGTTTAACTACCATTTTACCAAGTTATGAAATAATGAATGGGACAAGT
GCAGTTTCTCCTACTGTAACCACAACCgctttgaaaagtgaaattaaTGC
AACTGATTTACCAGAGATTTCTCCATCAACAACGTCCATTGGGGAATTCA
CACTTTCCAACAGCATCAATGCATCATCAATTTTGGACCTGCAACCTCCA
GAGACGACAGAGATGATGACTCCTTTAAATGCTTCTATATCAACAATTTT
AGAAGTGCTGGAACCACAGAGCACTACATTACCAAATACAACCAAATCAT
CCCTTGCACTTCAGTCAATGTCATCTTCACAGATCTCACCATCAATACAA
GGCAGCAGAATGTCTTCACCTCAAATCTTTCCATCATCCACAAACATTGC
ATACTGCACCAGATATGTCACTACGTCAATTTGTCATGGTCAAAGTCTCA
AGACATCAATATATGCCAGTGAAGGTAAAACATCAACTGATTTTTCATCG
ATCACGACAATGACAGAAATTTACACGACCTTACAATCAATAGAATTAAC
AGTGACAACAATGATATTGACATCATCATTAACAACATATTATAATACAT
TGACTACAATTGACTTTACAAAAGGTATAATTTCCACATTACAGATTAGC
ACAGTTACTCCAGCATTGACAGAAAGAACACTTTTGACAAACACTGCTTC
AAGCACTGAAATAACATTCGCAACTACTGCACATACAAACCAAAGTACAA
TTAACACTCTAAGCACAGCACACTTGGCACCAATGACACAACTCCAAAGC
ACTACAGTAATGACGATCACAACAGAACCACTATTGACCACATCACCAGT
TTTTATTGCACCTTCTTATGTTTCATTTACAacacattttattttagtaT
CCCAATCACCCACcaccaaaacttttaaaacatcaGAACTGTTAGCCACA
CAATCTTTACAACCGCCCACTTCAACAGTAATTACCACCCAGCCACCAAC
ACCCACAACTGCACCAACAACCAATCAAACCCTGGTTGAGCTCACCATCA
TAGTCAGGGATCAAACAGAGGATGTGACTTCCGACACTTTCAAATCTCAA
ATGGAACGCAGACTTGCAGATACTTATGTACGTGCACAAAATATTGCGCA
ACGTCGCAAGAGAAGAGCTGCAACATCTGGCAATATTACAATTGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000204_pilon | genome | sc0000204_pilon:76470..79442 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2973:1 |
|
