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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1050778..1053298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039977 ID=XLOC_039977|Name=XLOC_039977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2521bp|location=Sequence derived from alignment at sc0000011_pilon:1050778..1053298- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGAAGCTAAACAAGTGACAGCTATTCCGAGGATTCGCGCTGCACTCAG
TTTCATGAAGAAAGATATGTTTGAGGTTTGTAAGGGTTCCATTGTAAAAT
TTTTCTTGTACTTTATAGTTTGCTTAATATGTAATCGGGGGATACAAGCG
GGCACTTTGGAAGGGGTTTAGCTTGCCATGATAAATTTCCGAGCAGATCC
TAATAGACGATATCGCGTTTAGATAAATGCAATGCATTCTGGTTTCTCGG
GGACCCTCAAGGGAATTATAATCTATTCCAGATCATTATATAATCGACAT
TATAATTCCTTTGAGAGTCCCCGAGAAACCAGAATGCATTGCATTTATCT
AAACGCGATATCGTCTATTACGGTACGTACTTACTCTCGGCTGAGGTGAA
ACAATCCCACCAAAAAATAATTCAAAAATCGATCATAAACATAAACATAA
ACTTTGGAAACCAGTTGCGGACTTCAATATTTTGGCTGATGAACATTTTC
AGATCTTCATATTCCAAGCATGTCTTTAGAGCAGAGCACACTCCACACAG
ACAGACATGATCTCAATGAAATTCGGCCATTATTAACGACTTATTTCAAA
TTTTAATGATAGCTTTGAAGAATGTTTTTTTTGAAAGTTTCTTTACTTTA
AGTTAGGTCCCCCCCCCCCAATTAAATTGGTTTAAAAATTTCAAGAGTTT
GTAATGACAAAGACATCATTTGTATCGTGGTAAAGAGGTTTGGCCATAGT
ATGAATGTTTTTAGACTAATAAGAATCTCTTACTCAATTCTAGGTTCCAT
TCATTGCGACATACCGTAAAGAATACATCGAACCCGAATTGAAACGAGAT
GATTTGTGGAAAGTATATGAATGGGACGAAAAAGTAACTTTTATACTTAC
TTACATCACAATCGTGAAAGCCATTGGAAAGCTTCAGTTTGTAACATAGA
AAACATTTACGTTCTTTAAAGACTGATAGCACAATATTTGTGTTAATAAT
CACGGATTTTGAGGGGAAGAATATGGGATATTTTCATCGGCTCAATGAAA
CTTTTATGGAGTGGGATAGGTAAAGAAATCGGGGTATATTCAGTCAGCAC
GTTGCTCTATAGTCTTAAGTTATTCCGTCTCAACGAAGTATATAACCCTA
TGGGCACACAACGTCTTATGGACATTCAATGGACGGCTTTAAGACCTTTG
GACGTCCTAGAAACGTACATTAGACGTCCAAAAGACGCTAGTGCCCATTG
GGAAAGAGGCTTTTCCGTCTCAAAATAATGCATAATTCACCAAAAGTTTT
TAGAATACGTTCATATATGAAAATTTGCTGTGAAATGACAATTTTCCGTC
TAAAACTTAAAAACCTTGCCCTGACCACTATTTTATTCCAGTACACGCAA
TTTACGATGCGTCGTGAGAACATGCGTAAGATGTTTCAAGAGATGCAGAA
ATACCAATTCGAACTGGCCCGAAACGACGAAGAAGCTGCTTCAAAACCTG
GCTTCAAAGTCATCGAGCAAGAAGACCTTGACAGGTATAATATAATAGCA
AGCATTGAAAAAAATTATCGGTCTATCATATAACACCCATATTACACGGA
CTATAAACTCTGGCTACATTGCAACCCATTTTCTAAGCTACTGCACAGGA
GCAAAGCATCCAGATCTATTCCATACTACACATGTGATTTTTTAACTTAC
TTTTATTTCTTATACGGTCTTTATACGTTTGCAAGATGATAAGACAACAA
GATTTTCAGATTTTGCTTCAATACCATATGAATATGAATATCATTTATCA
TAGGCGCTGTGGTATAGTGGTCATTGACCTGGGTTGCTGCACAGGCGACT
AAGGTTTGATTCCCACTCGCAGCGGTTCACTTGGCAAGTGAATGAACCTT
CGCCCGGGTCAATCCATGTCATGTGCAAGGTGCTGACGGGGCAAGGTGCT
GACGGGGCGCTCATTGGAAGCGTTTATAGTTGCGAAAATAGGCCTCAAAG
CCTCCTGTAAAAATACAAATACACAAATCATGGTTTATTTCATTTGATGG
ATTTCCTTCTCTTGGAAGTCAACGAATACTATTCACATCAATTCCCTAAT
TCATTCGAAAACTATGATACACGGGTTCTTTCAAAAAGTCAACAAAGCTT
CGAGAACTCTTTTGATCAAACTGAGATCAGAATTAATAATTTACTCGAAG
TTTAACAATGCAAAGAAACCGGTTATTTTTCTACATTATCAATCTATTTT
TTATGATTTTTACAGACTTGACACAGCCGCCAACCTACAAGAATTGATGG
ACATTTACGTTCATTTCCAAGTGTACCATGGCAATGAAATGGTAGACATG
AAAGAATGGAAAGCCAAAAATAAACCGGCACCCGAGAAGAAGATGAAAAA
GAAGACTATCCGTATCAAGAAACCGAAAACGAAGAAAGCCAAGGAACTGG
AAATCGATCCGGAAACGGGCGAACCGGTCGAAAAAGAGGAAGGAGAAGAA
CCGGAACAAGAAGATGATGAT Coding sequence (CDS) from alignment at sc0000011_pilon:1050778..1053298- >XLOC_039977 ID=XLOC_039977|Name=XLOC_039977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000011_pilon:1050778..1053298- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGAAGCTAAACAAGTGACAGCTATTCCGAGGATTCGCGCTGCACTCAG
TTTCATGAAGAAAGATATGTTTGAGTTTGAAGCTAAACAAGTGACAGCTA
TTCCGAGGATTCGCGCTGCACTCAGTTTCATGAAGAAAGATATGTTTGAG
GTTCCATTCATTGCGACATACCGTAAAGAATACATCGAACCCGAATTGAA
ACGAGATGATTTGTGGAAAGTATATGAATGGGACGAAAAAGTTCCATTCA
TTGCGACATACCGTAAAGAATACATCGAACCCGAATTGAAACGAGATGAT
TTGTGGAAAGTATATGAATGGGACGAAAAATACACGCAATTTACGATGCG
TCGTGAGAACATGCGTAAGATGTTTCAAGAGATGCAGAAATACCAATTCG
AACTGGCCCGAAACGACGAAGAAGCTGCTTCAAAACCTGGCTTCAAAGTC
ATCGAGCAAGAAGACCTTGACAGTACACGCAATTTACGATGCGTCGTGAG
AACATGCGTAAGATGTTTCAAGAGATGCAGAAATACCAATTCGAACTGGC
CCGAAACGACGAAGAAGCTGCTTCAAAACCTGGCTTCAAAGTCATCGAGC
AAGAAGACCTTGACAGACTTGACACAGCCGCCAACCTACAAGAATTGATG
GACATTTACGTTCATTTCCAAGTGTACCATGGCAATGAAATGGTAGACAT
GAAAGAATGGAAAGCCAAAAATAAACCGGCACCCGAGAAGAAGATGAAAA
AGAAGACTATCCGTATCAAGAAACCGAAAACGAAGAAAGCCAAGGAACTG
GAAATCGATCCGGAAACGGGCGAACCGGTCGAAAAAGAGGAAGGAGAAGA
ACCGGAACAAGAAGATGATGATACTTGACACAGCCGCCAACCTACAAGAA
TTGATGGACATTTACGTTCATTTCCAAGTGTACCATGGCAATGAAATGGT
AGACATGAAAGAATGGAAAGCCAAAAATAAACCGGCACCCGAGAAGAAGA
TGAAAAAGAAGACTATCCGTATCAAGAAACCGAAAACGAAGAAAGCCAAG
GAACTGGAAATCGATCCGGAAACGGGCGAACCGGTCGAAAAAGAGGAAGG
AGAAGAACCGGAACAAGAAGATGATGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1050778..1053298 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 436-690:256 |
| Aaloc | 292-432:1131 |
| Aaloc | 202-291:1729 |
| Aaloc | 127-201:2522 |
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