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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000050_pilon:817657..824211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039705 ID=XLOC_039705|Name=XLOC_039705|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6555bp|location=Sequence derived from alignment at sc0000050_pilon:817657..824211- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGACTCTTTACCATCATCATTTGGTAAAAGATATGACAGAGATGA
TAGAAGAGGTGGTGGTGGAAGAGGGTAAGAGTTTTGTTCTTTGCGTTTTC
TTGTTTCGCTCTTGTAATTTATGCCATTCTGCTTATGTTCACAGAAATCA
TAGAACCTAAATTTACTTGAACCTCTAGTATTAAGCTATTTCTTTTGTGG
TAGTTTTTGGATTTTACTGTAGAAATAAACAATGTCCTAAGTAGCAAAAT
AATTATATAAGCGAAATGTGTTGAGACAGAAAATTTATATTTCAAATGGA
AATGACATCTTTTCATTGCAACTTTTATATGAAATCATCTAATACAATAG
CATCGAGTGGGTTAGTACTTTTGGTTGAATTGGGTCCTAAATTGTCCCAT
ATTGGGCCATTCCAGAATTTGTCTGTAACAGGGGGCGGACGACACAGGAT
TTCCGAGGGCAAAAGCTTTCATCAAAATTCAAAATTTCCAGGGCGAGAGA
AGAAAATGTATAAATTTCCAAGACATTTGAATTTAAAAAGGCAAAAATAA
GCAGAATTTCCAATGCATTTTGCAAAAGTACATGGATTTTTATTGGAATT
TCTGAACACCACTGGAAAAGAAAAATTATTTCTGAGGCTAGAAAAAATCA
TTGGTTGAAATAAACTTTTTTTGATAAGACCAGTAAAATTTTGCTGAGGC
TGGTCTGTTCTTATTCATTTATTTGATTTATTTATAGGGTGTAAATAAGA
TATTTTAGGCATTATACCCAATTTTTACTTGGATTTTGACAAAACCCAAA
AGATCGAGTTTCAAGGGGGAGGGGTCTCCTGCCTAAGGTAGGGGGTCTTC
ATAAAATTATTATTTCTGTTTTACTTTCTTAAAGCAATCTTTAACAGTCA
AGAACAAGTACAAGTAAGGATACCTTCGGCAATTCTCTCCTAACTAGGAG
AGTTGTATCCTAATTTGGGGATTTAGGTATCCTAGATAGGAGAGCAGACA
AGCAGACTCTTTGACCTGAATTCTTGAGGTTACTGCTTCAATCCGTGTTT
GGAAAACTATGCAAACCTTTTCTTCATCAAGATTTTCGCCACTGACCAAA
ATTTAAAGTATTTTCTCTGGTGGGTTCCTCGAAAATTAACATCCTTAATA
ATCTGCTGTTAACCCTTTCCGGACGCATGATTTCACGGCTATATGACGCA
AACAAAAATTTGATTTTTGACTGGCTTCACTAAAATTGCAATAGAAAGTG
ATTGATAAAAGATATCACGATAAGTAATACCTCGTTTTTTTCACATGTAA
TAGGGGTTTTGAAATACCAAAAAAAAAATTTTAAATATGGCTGACACCTG
GTCACGTGACCGAAAAATCGGCAGATTTTTTTTCGGAAAGGCAAAATTTT
TGACTTTGAATAAAGAAATAGAGTAAAAGGCATTTGCTTTACGCCTTGAA
CTTTGAATTGATTTAGGAATGAATTACTGGTCGGGTAAAAAAATTTCAAG
TCAAAAGCTTTCCAAGAATCTGAGTGAAGTGATTTTTTGTCCAAATTTTT
GAGCAATTTTTCCCTTACAGATTTAGCCTGAGTAAATTTACAACAAACAT
TGAAAATTTATAATTCTAGTTGTAAACAAGATATCGAAAAGCGGTTTTTT
GCAGGTTACGGGAAATTTATCTCAAAATCATTATTCAAAGCCATGTTATT
GTATTTTGGCGCGAAAACTGTTAAAATCTTTACAACTATGGGCCACCCGG
TGGCCATGCGTCGTAGGAAAGGGTTAAGGCGTCATAAGAGCCTAAAATTT
TGCTAACACAAGTTAAAGATTTGTTTTTCTTTTTACGGAACGCCCCTCTA
CGGTCCGAATTTCAAAATGGTAGCCGTAAAGAAGGAAGGGGCCTGGGTGA
TTTTCGCGCAAAAAAAGCGTTCGCATATGCCAGTTAGCACATTTGAGTGG
TTTTGGGCTATCGTTTAGAATTCCGCCACCCAAACTCAATGCTTATTATG
CTTGCTTATTATTTATTATTTATCTTGGAAGTGGTAAGATGGCGCGGATG
TCTCTGGTTGGTGAAAAATACAGTTTTTTTGGTTTTTATTATCCAAATTA
GGATGTTGATTGCTATATTGGATACTTTTTTGTATCCAATTTAAGATTCT
CTCCTAAGTAGGAGAGAGATTGCCAAAGGTATCCTAACTTGCACTTTTTC
TTGACTGTTTTAAGGGGGTAGACTGAAATATCTATAGAATTTCCTAAGGG
AAGTTCTAAGTTTTCAAATGCATTTCCTAGGGTCGTGACCCCTATAGAAA
CAAGAATAAGCTACTTCTGACTGACATTACATGTAAAATATCATAACCTG
AGTAAAAGGTGCTCCGATATATTTACACTTAAAAAATGAGTTATTGATAA
TAAACTATGTAGGAGCAAGTCTAGCCAAGTTTGATAAATGACGTGTCATG
TGGAATTGAAGGCTAAAAATTATTAATTTGGAAGATGAATCAACATAGGA
AAATTATGATATGGTTTTTTATGTCTATTTTACTAATTCAAAGTAAGTTT
TTATTGGTACTGTAATAGCAACTGTCAAAATTTCATACAGGCTCTTTTCT
GAAATATTTTAAGAATATGGCTAATGTCACGCTAATGTCACTTTTTCTTT
ATTTCAGTGGATATGGTGGTGGATACGGTGGTGGCAGAGGAGGCGGTAGA
GGTGGCGGTGGTGGAGGAAAATTCAAGGATAATCAAGCAGGGGCCAGTTT
GAGAAAACCAAGATGGAATATGGACAGTCTCCCCAGATTTGATAAAAACT
TCTATAGAGAGCACCCAAATGTCCAAGCCCGCAGTATGGTGAGTCAGGAT
TTTGGTTGAGTTTTTAGGTTGAGCAGCCTAGTCTTCTCTGGTGCATAAAA
ACCAGTAAACCCATTACCAGCCATTATAAACATTACTTTTCTCCAATCAG
CTCATTGATCTATTTGAAATTGTATTTTCTTAAGCTCCGGGTCCAAATTA
TACACATGTTATTTTGTTTCGGTCTTTCGTTAATCCCCTGCCATTAATTG
TAAAATAGACTCCTTATCCTTTGATGGTTCTACTTTTAGGAAGCTGTAGA
AGAATACCGTAAAGCAAGAGATATTACTGTCGCTGGACGTAATTGCCCTA
AACCATGTCAATCATTTGAGGAAACCAATCTACCAGGTAAAATAAGCTAG
TGATTGGTCATTATTCAGACCATCAACAATCATTCAAACACCCTAAGACT
TCATGTTTGATTTGTTCTCTACTCTCAGGTACCTAATAAGCAGAGATTTT
TCAAAAATAGGGTAGGGTGTCTTGTTTCTTTGAAAATTATGCTTGCAGGG
AAAATCTGGGAAATCAAAAAGGCTTAAAACATTGAGCACCCAAGGATATT
GATTATTTATTTTCAGATTATGTTGCAGAAACAATAAAGCGAATGAATTT
CAACGAGCCTACACCAATCCAAGCACAAGGGTTTTCTGTTGCTCTGTCAG
GTAGAGATAGTGTTGGTATTGCTCAAACTGGTAGTGGAAAAACCATTTCG
GTAAGCGTTTATAAATCTTTTTTCTTTGATATTTGATTTTCATTATTGTT
ATAAATTTAATGTCATCATACAGTGGTAGCAACTCAATTTGTAGTTTATT
TTGCCGAAACAGTGGGGAATGCCAAGTTATTTATTGACACCATCCTCTTA
AGCTATCATTTTTGACTGAAAGAAATGTGGAAATATGTAAACTTTTCTTT
CATTTTAACTTTGTTTTTTGTTAATAGTTCATGTTGCCTGCATGTGTGCA
TATTCATCACCAAGAACCACTCAGAAGTGGAGATGGCCCAATTTGTCTTG
TCCTTTGTCCAACCAGAGAACTTGCTATTCAATGTCAAACAGTTGCCGGT
GAATTTGGTAAATCCAGTCGTATCAGAAGTACATGCATTTATGGTGGTGC
ATCAAAAGGACCACAAATTCGAGATCTAGAGAGAGGATCTGAGATTGTTG
TTGCTACACCAGGACGTCTTATCGATTTACTTGAGATGAGAAAGCTTACC
TTGGGTCGTGTCACTTACATGGTTTTAGATGAGGCAGACAGGATGTTAGA
TATGGGTTTTGAACCACAAATTCGTAAAATCTTTGACCAAATTCGTCCAG
ACAGACAAGTTCTTATGTGGTCTGCTACATGGCCAAAAGAAGTTCGAAAA
CTTGCAGAGGACTTTTTGAAAGATTATGTTCAAATTAACATTGGTAATAT
AAACATCCATGCAAATCACAATATCTTGCAGATTGTGGATGTTTGTCAAG
AATATGAAAAAGAAAACAAACTTGTCAAACTGCTTGAGGAAATAATGGGA
GAAAAAGAAAACAAGACCATTATTTTTTGTGAAACCAAACGTAAAACAGA
TGATATTACTCGACGCCTTCGCAGAGATGGGTAAGTCACTGTTTGTCACT
TAACATTTGCACATTTTGCTCTTCTGTCAGGATTCTTAATTCTCATTTTA
ATACTTAACATTCCAGCTTAGATTGCAGTGTTTATAGGGAATTTCCCCTT
TTTTTTGATTGGGGCTAAAAATTGAATATCAAACAATTTTCTTTTAGTTG
GCCTGCTATGTGTATCCATGGAGACAAATCCCAACCTGAAAGAGAATGGG
TCCTAAAAGGTAAGTTGCAAAAAATAAGAACTAAGCCTAAGATAACAAAT
TTAGTTATTTTAAATCAAAAAATTTGAAAAATCCCTAGGAAAATAAAGAA
ATGTGTCCAAAATAGGGCAAAACTGCCAAAATTTATCCCCGTGAAATAGA
ATTTTTTGGAATTTTTTTACGACTACAAAAATTAGTTTAAATAATTAAAA
TCTGAAATTACTTCCCTAGCATGCATGCATGAACTTTTCCTTTAGAATAT
CAAAGATTTACGAATTATCAAGCTGACCTCAACAGGATGATAATAATGTC
TTCTTACATCTTAGAATTCAGAAGTGGAAAGTCACCAATTCTTCTTGCTA
CTGATGTTGCTTCTCGTGGATTAGGTAATAAGAGGAATTCATGGCATTTG
CAACACTGTTTTGACTTAAGTTGCAATTTAGTTTACATTACCAATCTCTA
TGTTATAATCTCTTTACTTTTAAACTATGTAGTTGTTTGTGTTGTATGGA
ATTATATTTTTAATAGTGATTTTTTTGGATTTTATTTATTTTTATTTTTA
ATAGTGATTTTAAATGCAGGTCTTTTCTTTCTTTATTAGGTGCTGTTGGT
GCCACTTAACGACGACACATGACATTGAATTACCCACATACTTAAAATAA
TTGGAACATAAAAGGAGTTCTCAAGAGTTTTCACGCACAATTAAATTTGT
AAAACAGCTGGTTCTCTCAGTCAAGATCTAGGCTCTAGCTTAAAAAAACT
CAGGTAGGCACATGTATCAAAGGCAGTTTCCAGTCACTAAAAAAACTGCC
AATCGAATCTTGCCTAGATTTCTTGGCATATTTCTAAAAATGTACAGAAT
CAGCTGGTGCGTGACAACAAAGAGCTCCTGTAATGAAAACAATGTTTCCA
AACGTCTGGTTATGGTGAAATTTCAATGTTATGTTGCAATTCGTGTGTGT
GGCACCGATTGATAAACTCTCTTGGATATTATGGTTTTCTACCTAAAATT
TATTCAAGCTAACTTTAACCTTTCAGTACTAAATTTTTTGTTATATCCTG
CTGTTTATATATATTCAGTTACACACTTCACAATTCCACACTCTAAACCT
ATCAGTTTTCATTTTAGCGATATAAAACTATTATATACAGTAGACTGACA
AGAATTATCCTGAATTTTTCAGATATTCCAGACATCAATTTTGTTGTCAA
TGTGGATTACCCTAACAACGGAGAAGACTATATCCATCGTATTGGACGTA
CAGCTCGTGCTAATCGAACTGGTACTGCTTACACTTTCTTCACCCAAAAC
AATGGTAAAAATGCTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAACCA
AGTAGTCCCACCCAAGCTTCAGGATCTAGCTAAAGGACATTATGGTGGAC
GAAAGAGAGGTATGTCCATGGAAGGCCTCATTAAGAATTGAAGTCGATAC
AATTTCAAACTGGGATTTTGAAGATTTCTTGTTCTATTCAAACGCATGTT
ATAATCTGCTTTGTATTTCCGATTTGAGAAGCCATCGTATAATTCTCATC
TGTCAGTTAAAGCTTTTATTGTCTTAGCATTTCGTCAAAACTTAGTCTTG
AAACGATAGAAAACTCTTCTTTTCTTTCAGTGAGATACAGTTCTGAAAGT
GACGATCATGGTGGCAAACGTTTCGCTGGAGGATCTCGAAGCGGAGGAGG
TTCACGAAGTGGCGGCTACAGCGGTGGTGGTGGTGGCTCCCGCAGTGGAG
GATACGGAGGTGGTGGCTCCTCCAGAGGATATGGTGGAAGCAGTGGAGGA
AGCTCCAGAGGCGGAAGCAGCCGTGGTGGGAGCTACGGTGGCGGAAGTAG
TTATCAAAATGGAGGTGGAAGTAGCGGCGGTGGCCAAAATTGGAATAACG
GAGGT Coding sequence (CDS) from alignment at sc0000050_pilon:817657..824211- >XLOC_039705 ID=XLOC_039705|Name=XLOC_039705|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3444bp|location=Sequence derived from alignment at sc0000050_pilon:817657..824211- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGACTCTTTACCATCATCATTTGGTAAAAGATATGACAGAGATGA
TAGAAGAGGTGGTGGTGGAAGAGGATGTATGACTCTTTACCATCATCATT
TGGTAAAAGATATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGTG
GATATGGTGGTGGATACGGTGGTGGCAGAGGAGGCGGTAGAGGTGGCGGT
GGTGGAGGAAAATTCAAGGATAATCAAGCAGGGGCCAGTTTGAGAAAACC
AAGATGGAATATGGACAGTCTCCCCAGATTTGATAAAAACTTCTATAGAG
AGCACCCAAATGTCCAAGCCCGCAGTATGTGGATATGGTGGTGGATACGG
TGGTGGCAGAGGAGGCGGTAGAGGTGGCGGTGGTGGAGGAAAATTCAAGG
ATAATCAAGCAGGGGCCAGTTTGAGAAAACCAAGATGGAATATGGACAGT
CTCCCCAGATTTGATAAAAACTTCTATAGAGAGCACCCAAATGTCCAAGC
CCGCAGTATGGAAGCTGTAGAAGAATACCGTAAAGCAAGAGATATTACTG
TCGCTGGACGTAATTGCCCTAAACCATGTCAATCATTTGAGGAAACCAAT
CTACCAGGAAGCTGTAGAAGAATACCGTAAAGCAAGAGATATTACTGTCG
CTGGACGTAATTGCCCTAAACCATGTCAATCATTTGAGGAAACCAATCTA
CCAGATTATGTTGCAGAAACAATAAAGCGAATGAATTTCAACGAGCCTAC
ACCAATCCAAGCACAAGGGTTTTCTGTTGCTCTGTCAGGTAGAGATAGTG
TTGGTATTGCTCAAACTGGTAGTGGAAAAACCATTTCGATTATGTTGCAG
AAACAATAAAGCGAATGAATTTCAACGAGCCTACACCAATCCAAGCACAA
GGGTTTTCTGTTGCTCTGTCAGGTAGAGATAGTGTTGGTATTGCTCAAAC
TGGTAGTGGAAAAACCATTTCGTTCATGTTGCCTGCATGTGTGCATATTC
ATCACCAAGAACCACTCAGAAGTGGAGATGGCCCAATTTGTCTTGTCCTT
TGTCCAACCAGAGAACTTGCTATTCAATGTCAAACAGTTGCCGGTGAATT
TGGTAAATCCAGTCGTATCAGAAGTACATGCATTTATGGTGGTGCATCAA
AAGGACCACAAATTCGAGATCTAGAGAGAGGATCTGAGATTGTTGTTGCT
ACACCAGGACGTCTTATCGATTTACTTGAGATGAGAAAGCTTACCTTGGG
TCGTGTCACTTACATGGTTTTAGATGAGGCAGACAGGATGTTAGATATGG
GTTTTGAACCACAAATTCGTAAAATCTTTGACCAAATTCGTCCAGACAGA
CAAGTTCTTATGTGGTCTGCTACATGGCCAAAAGAAGTTCGAAAACTTGC
AGAGGACTTTTTGAAAGATTATGTTCAAATTAACATTGGTAATATAAACA
TCCATGCAAATCACAATATCTTGCAGATTGTGGATGTTTGTCAAGAATAT
GAAAAAGAAAACAAACTTGTCAAACTGCTTGAGGAAATAATGGGAGAAAA
AGAAAACAAGACCATTATTTTTTGTGAAACCAAACGTAAAACAGATGATA
TTACTCGACGCCTTCGCAGAGATGGTTCATGTTGCCTGCATGTGTGCATA
TTCATCACCAAGAACCACTCAGAAGTGGAGATGGCCCAATTTGTCTTGTC
CTTTGTCCAACCAGAGAACTTGCTATTCAATGTCAAACAGTTGCCGGTGA
ATTTGGTAAATCCAGTCGTATCAGAAGTACATGCATTTATGGTGGTGCAT
CAAAAGGACCACAAATTCGAGATCTAGAGAGAGGATCTGAGATTGTTGTT
GCTACACCAGGACGTCTTATCGATTTACTTGAGATGAGAAAGCTTACCTT
GGGTCGTGTCACTTACATGGTTTTAGATGAGGCAGACAGGATGTTAGATA
TGGGTTTTGAACCACAAATTCGTAAAATCTTTGACCAAATTCGTCCAGAC
AGACAAGTTCTTATGTGGTCTGCTACATGGCCAAAAGAAGTTCGAAAACT
TGCAGAGGACTTTTTGAAAGATTATGTTCAAATTAACATTGGTAATATAA
ACATCCATGCAAATCACAATATCTTGCAGATTGTGGATGTTTGTCAAGAA
TATGAAAAAGAAAACAAACTTGTCAAACTGCTTGAGGAAATAATGGGAGA
AAAAGAAAACAAGACCATTATTTTTTGTGAAACCAAACGTAAAACAGATG
ATATTACTCGACGCCTTCGCAGAGATGGTTGGCCTGCTATGTGTATCCAT
GGAGACAAATCCCAACCTGAAAGAGAATGGGTCCTAAAAGTTGGCCTGCT
ATGTGTATCCATGGAGACAAATCCCAACCTGAAAGAGAATGGGTCCTAAA
AGAATTCAGAAGTGGAAAGTCACCAATTCTTCTTGCTACTGATGTTGCTT
CTCGTGGATTAGAATTCAGAAGTGGAAAGTCACCAATTCTTCTTGCTACT
GATGTTGCTTCTCGTGGATTAGATATTCCAGACATCAATTTTGTTGTCAA
TGTGGATTACCCTAACAACGGAGAAGACTATATCCATCGTATTGGACGTA
CAGCTCGTGCTAATCGAACTGGTACTGCTTACACTTTCTTCACCCAAAAC
AATGGTAAAAATGCTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAACCA
AGTAGTCCCACCCAAGCTTCAGGATCTAGCTAAAGGACATTATGGTGGAC
GAAAGAGAGATATTCCAGACATCAATTTTGTTGTCAATGTGGATTACCCT
AACAACGGAGAAGACTATATCCATCGTATTGGACGTACAGCTCGTGCTAA
TCGAACTGGTACTGCTTACACTTTCTTCACCCAAAACAATGGTAAAAATG
CTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAACCAAGTAGTCCCACCC
AAGCTTCAGGATCTAGCTAAAGGACATTATGGTGGACGAAAGAGAGTGAG
ATACAGTTCTGAAAGTGACGATCATGGTGGCAAACGTTTCGCTGGAGGAT
CTCGAAGCGGAGGAGGTTCACGAAGTGGCGGCTACAGCGGTGTGAGATAC
AGTTCTGAAAGTGACGATCATGGTGGCAAACGTTTCGCTGGAGGATCTCG
AAGCGGAGGAGGTTCACGAAGTGGCGGCTACAGCGGTGGATATGGTGGAA
GCAGTGGAGGAAGCTCCAGAGGCGGAAGCAGCCGTGGTGGGAGCTACGGT
GGCGGAAGTAGTTATCAAAATGGAGGTGGAAGTAGCGGCGGTGGCCAAAA
TTGGAATAACGGAGGTGATATGGTGGAAGCAGTGGAGGAAGCTCCAGAGG
CGGAAGCAGCCGTGGTGGGAGCTACGGTGGCGGAAGTAGTTATCAAAATG
GAGGTGGAAGTAGCGGCGGTGGCCAAAATTGGAATAACGGAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050_pilon | genome | sc0000050_pilon:817657..824211 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1597-1722:127 |
| Aaloc | 1501-1593:274 |
| Aaloc | 1264-1497:732 |
| Aaloc | 1204-1260:1590 |
| Aaloc | 1141-1200:1958 |
| Aaloc | 487-1137:2779 |
| Aaloc | 355-486:3138 |
| Aaloc | 256-351:3467 |
| Aaloc | 76-255:3898 |
| Aaloc | 1-72:6556 |
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