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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000050_pilon:633719..638877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039699 ID=XLOC_039699|Name=XLOC_039699|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5159bp|location=Sequence derived from alignment at sc0000050_pilon:633719..638877- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGATAGAGACAGCAAGCAGGATGATTATTTCGATGCTTTGGCATT
ATTCAATCCACTAGAGCGTGAATGTATTCAAAATATAGAAAGTGAGGAAA
ATTTGATGGAAAGACTACAGGATCAGAAAGAAGCTGCCATTGAGCGGCTA
TGGTACACATTTCAAAGTGCTGCATCGTCACTTGCACAGCTACATAAAGG
CAAGAAGAAAACATATTGTTTATATTTTTTGAGTGAATTTCAGCTTTCTG
AAAGAATGAATGGATTTGGAACCCTCTGTGATGCCTACACTGCCCGTACT
GCCCGTATTATGTTTGTACGGGCTGTATGGGCGAGTCAACTTTATTTACA
ACCCGTACGTCCCATACATTTGTACAGGCTGAATGGGCAAGTCAACCTAA
TTTACATCAAACCCTGTATTTTCAAATATAAAATAAATTGACTACTATGC
AGAATAGCCAAGCTTTTTAAAAATCCAAAGATATGAATTGCATAGCTTAA
TTACCAAAAAATAGTGCTTTGGGACACTGGGATTTTCTGGAATGGCCCAC
TGCGATTTTCAGAGTAATGTTTAAAAATCAGGGAAATCCTTAATTAATGT
TTGTAACACTGTAAGTGCTGTTCAGTTTCCTTAACTTTAAGGGACCCCAT
TTTCTGGCTCAATAAAACCTTTATCAGTCAGTTGTTTAAGAGAAAAACTG
CAATTATTGCTCTTTTCGGAAATTATTGCCGAAAACGGCAATTTTTTAAC
AATGAAATGCTGAATCAGCAGAAAAATAAAAAAGTAAACAAAATGCCTTT
TTTGCAAATAAAAATTGACTTTATTATTGAACACGTGGTATTTGACACCC
TTGCGATAAGTAGGCCCACTGTGCCTCATTTAGTTTTGTTTTCAACTGGT
CTTTGTTGGCAGTGTATTGAGCAACGAAAAATTGAAAAATCACTTTTAAA
AATCCGAAAAACCTTTTTCTCAGTGCAATTTTACTATTTTCAAACACCAC
TGACATCTTTGCCCTTTAAAAAGGACAACACATTTTGCTGATTCAGCATT
TCATCGTTGAAAAAATTGCCTTTTTATGGCAATAATTGCAGAAAAGAGCA
ATAATTGCAGTTTATATCTTAAACACCCGACTGTTTATGTGTACAATTTG
AACGCAAAAAAAATTTACAATCAAGGTTGCTTAAAATTGGAAAATTTGGG
AAATGTTTGATTTTAGATCCCTCAAAATCTCGCCATATCCCATGCAAGAT
ACCTCAAAATCGGAAACAGAATAATTCTTGATTAGGAAGGAGTAGTTAGT
TTTATTGCTCTGTATCGGATAAAGAAAAAATACTATCTTTAAAGATCTTT
AATTTTTCTTCACAAGCAAAATTGGATATTATTTCAATCCAATTAAAGAT
CGCTGTGGGATCAGAAACTGTCAAAAACCAGCTTTTTCCAATTTTCATTT
AGTTACAGGAACGAACACACCTTCAAATTTCCCAGAAAAAAATGTGTGCT
CCACCGTTACGTATATAAAAATGTGTTTGGGGGTAAACCAAACTGTAAAT
CATCTGTAATGCTTGGTCTCTGGAGGTAAACAAATAGCTGTTTTTGCCTG
TGTTCCCTTAGGGGAGCTGTTTTTTAGCCAATTAAAAACCCCCTGAAATT
TTAAAATGTTCTTTCTATACATGATATTATACCACCCTGAAAATTGAAAA
AAAACTCTTTCCCTAACCTCTTGCAGGCAAAAATGTGTTCAAATTACCTC
CCAATAAATTTTATACGCAACGATGGAGTGCACGGTCTTCCAGGTCATTT
TGGAGAAGCTTGAATTATGGGAAAGGTGTATTATATTTTTTATATTTGTA
TTGATGATTTTGCGTGAAATCTTGCCAACTTGATTTTGGGTAAATTTTGG
GGATTTCATACCGTAAAATGAAAACATTTTACCAGTGGCACCAGCTGTTC
CAATATAAGATTTCTGGATAACAATTTTATAGAAACTTATATTCAATTCA
AAATTCTCTCAAATTCCTACTATTCGTCTAAATGTTTGATTTAATTTCTT
TTGAAAAAGTAATTAAAATTAGGAAGAGAAGTCCATCAGAAGAGTGTTCA
ATGATCAGGACCAGAGGGTCTTGTAATAAAATAACAGAATTCAAACTTCA
AAACAAGACTTTTCACTGTTTTTTTATTTTTCAAACAGTCAAAAAAGTGA
ATTTTGTCAACTTTTTTAATGTTTAGTTGATGATTTTCTATAAAGGTAAA
ACTGATAGTCTTGAAATTCAGATTTCTCATAGAATGTACAATATTTTATC
GAGAAATTTCTGTTCTCAATTGAAAATATCCGTATGCATATGAGTAACTA
GAAACCTTTGTATAAGACCATGTTCACACGTTACTGTTCCGTTTCGTTCC
AGTATGTTTTTCGTTACGGATCAAGTGTGTTCATATTGTTTTCGGAACAT
CCCGAGCAAGAAAACAGAGCAGTTCTGTTTGGATGAAAAAAGCGGAGCGA
AACCGTTTCAATCTGTTTTGCTTTTTAACGTCTTCTTTTTTGACGTTTCG
AATTTCGGAACGGAACGGAACGGAACGGAACCGTAACGTCTGAACATGGT
CTAAGTTCCTAGCTCACCTGAGCTTGCTCCACTGTAGAAGGTTTGGGACA
ACGCAATTTTTCGCGTTGGTGCGATGCAACATGCTCTATCTCGCCAACAC
AAGAAAAAAGTGTGTGTCTGTTAGCTGATGATCAGAAGATTTGAATTCAA
ATGAATGATGAGACTACCCAAAACGGATGAGGGGGGGGGTCAACGATTCA
GACGACAGTATTTGTAACATATGAAGTGATGTTCAAACTGAAAATGAGAA
TATATGACAAATAAATATTTGAATTGAACAATGAATTGAACAAAAATGTA
TCCAATGTCCCAAGGTTTCTTTTTTTGTTTCATGGGACAAAAAGTGAGAG
AAATACCCAGAAGACACGCTGATTTCGTCCATGGGACAAAAATGAGATTT
CACTTTTATTTCTAGAAAGAAAAATAGGGTTGAGACACAAGAAAACGTTT
CAGGTTGGTGGGATGGAGCATGTTGCATTGCACCAATGCGAAAAAAACTT
CTTGTGTCCCCATGCCTTAATGGCTGTATTTATAAGACTTTAGGAAGTAT
ACTGAGCAAGTCTGCTTCAATCAATCACTTTGAATGACAGAGGGAAAGTT
CAGTTGGTTCAGTAAATTTCTTAAAGATCTCCAACTGGGTGTTTCCCCCA
AATCTCCATATGTTTGTCTCCTTGATTTCCTCGTTTTGCTACATGTTGTT
TTGAACAAAACAGTAATTTTGTATTTAACCTGATTTAACAATAAAAGATG
TAAAGTCTCTGTAAAGCTCTTGAATATATTTTTCCATTTTATTTTTCAGA
ACGTGCAACATGTGACTGCTGTGAGCGATGTTTATACAGAAAAAATAATC
ATGATCGGTGGTTACCATTTCAAGGGGCTGCAAATAAAGTCACACATCTT
TTCAAAGGTGGGTTAACGTTATCGTAGCTCATTTTCATAGCCCATAGTCC
TCGTTACTAAGCGTTAATTAAAATTATTTTATTGCTCTTAAACATTTTAT
TTATTTATTCATATTTCATTTTTTTAAACAAAAAAAATGTACGGATAAAC
AGGGGTTATGGGTCCTAGGACCTTTTAGTATGAAATATATAGATGATAGA
TTTATAGGGTTCATTTCTATGATAGGACAGAATGATAGTCTCTTTTTGCT
GTTAAAATTCCAATTGTCAACTTGTCAAATGGATTCTGCAATTCTTTTAT
TTCGATTGGCTATCTGTTGAAGTGTCTTCCCAGATATTCTCTTTCCTTAA
AAATAGGAGGTACATTCAGTTATTCAGATGTCGATTAAAATTCCCTATAA
ATTAATTATTTTTGTCAGGGTCTAGCCATACTTTCGATAATTTTGTATAA
GTGAAATCCGATGCTTAGTTGTTTTTAATAGCAGAAATATTAATGTTTAT
AAACTGAAATATCTGACATCATTACAAAATCATCTGATTAATGGTTTGTC
TCTCTATTTCTGTAATTGCTTGGCAACAAAATTATTTTTCAACCAAGTAA
TTTTCTAAAGCACCAAATACCTTTTTTGTCCATAATGGGCCTGTTTATTT
AATTAATTAAAAATAATGAGTGTGTAATACATTATACATGCACACAGGAA
ATGTCATCTTGATTTTATTATGAGAATAGTATAGCTCCACTTCTTGTACG
TAATTACTCATCAAGCTACTACACAAAATGTCATCCTATCTTCTTATTAG
TGATAATAAAGTTTGGATACATTTTTTTATGGTCATTATAATGTTATTCA
CTTTTTCTAGACCACTTTTTAGACATAATTTTCGGGCTTTAAATCTTATC
AAATAAAAATTCGCCCTAATTCTCTAGCTGATGTTTGAAATTTGTTGATA
TTCTCGACATATTGTCTTATTTTTATGCATTATTTTTTGACAAAATGGCT
TGAAACTTAAACTTTTTGTGGTATTTGAATTTGAAAATTGGATTAGTTTA
GTTTTGGATTAAGTTTGGATAAATTCAAAATGAGTTTTTAGTTTGAAACT
CCCCAAATCTGATACATGCCAAAATAATTCTACTCAAAGTATTTCTAATC
TTAATATCCCAAAAAGAGCAAAATGCGGTTTAAGGCAGAGATTCCCCAAA
TTTATTACAATATTCCTAAAGGCATGCCCTCTCGATGATGCCTTTTTGTA
CATTCAGTTTCTTGTATCTTCTTCAGACATTCTCCTTTTAATTTCAGATG
GAAGTGATGCACTGAGAGCTGGAATTGAACTCGGTTATCACGCAGGAATA
CAACGGAGAAATAAAGAAATTACAAATTGGACTAAAAAGAAGCGGAAACA
TGTTCGCAGAGAAGACATTTTGTTACATTTATCTGGGCGGTCGCCACCAC
GGAAGCGCGAGTCACGAACCGGTAATGGTATATCGCTTTCCCCGAAACCA
ATGGATAGTGAATTATTGAACTTTGGTGAAAATAAAGACTTTGATTTTGC
CTCTTTCGTTGAAGGGCGTAACCCATTTGCGCCCCAAGAAGGAGGTCGTA
AACGCCACAGTGATATCAACATGCTTGATTCACCTCACAAGCGAGGACGG
TTTACTTAG Coding sequence (CDS) from alignment at sc0000050_pilon:633719..638877- >XLOC_039699 ID=XLOC_039699|Name=XLOC_039699|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1338bp|location=Sequence derived from alignment at sc0000050_pilon:633719..638877- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGATAGAGACAGCAAGCAGGATGATTATTTCGATGCTTTGGCATT
ATTCAATCCACTAGAGCGTGAATGTATTCAAAATATAGAAAGTGAGGAAA
ATTTGATGGAAAGACTACAGGATCAGAAAGAAGCTGCCATTGAGCGGCTA
TGGTACACATTTCAAAGTGCTGCATCGTCACTTGCACAGCTACATAAAGA
TGGATGATAGAGACAGCAAGCAGGATGATTATTTCGATGCTTTGGCATTA
TTCAATCCACTAGAGCGTGAATGTATTCAAAATATAGAAAGTGAGGAAAA
TTTGATGGAAAGACTACAGGATCAGAAAGAAGCTGCCATTGAGCGGCTAT
GGTACACATTTCAAAGTGCTGCATCGTCACTTGCACAGCTACATAAAGAA
CGTGCAACATGTGACTGCTGTGAGCGATGTTTATACAGAAAAAATAATCA
TGATCGGTGGTTACCATTTCAAGGGGCTGCAAATAAAGTCACACATCTTT
TCAAAGAACGTGCAACATGTGACTGCTGTGAGCGATGTTTATACAGAAAA
AATAATCATGATCGGTGGTTACCATTTCAAGGGGCTGCAAATAAAGTCAC
ACATCTTTTCAAAGATGGAAGTGATGCACTGAGAGCTGGAATTGAACTCG
GTTATCACGCAGGAATACAACGGAGAAATAAAGAAATTACAAATTGGACT
AAAAAGAAGCGGAAACATGTTCGCAGAGAAGACATTTTGTTACATTTATC
TGGGCGGTCGCCACCACGGAAGCGCGAGTCACGAACCGGTAATGGTATAT
CGCTTTCCCCGAAACCAATGGATAGTGAATTATTGAACTTTGGTGAAAAT
AAAGACTTTGATTTTGCCTCTTTCGTTGAAGGGCGTAACCCATTTGCGCC
CCAAGAAGGAGGTCGTAAACGCCACAGTGATATCAACATGCTTGATTCAC
CTCACAAGCGAGGACGGTTTACTTAGATGGAAGTGATGCACTGAGAGCTG
GAATTGAACTCGGTTATCACGCAGGAATACAACGGAGAAATAAAGAAATT
ACAAATTGGACTAAAAAGAAGCGGAAACATGTTCGCAGAGAAGACATTTT
GTTACATTTATCTGGGCGGTCGCCACCACGGAAGCGCGAGTCACGAACCG
GTAATGGTATATCGCTTTCCCCGAAACCAATGGATAGTGAATTATTGAAC
TTTGGTGAAAATAAAGACTTTGATTTTGCCTCTTTCGTTGAAGGGCGTAA
CCCATTTGCGCCCCAAGAAGGAGGTCGTAAACGCCACAGTGATATCAACA
TGCTTGATTCACCTCACAAGCGAGGACGGTTTACTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050_pilon | genome | sc0000050_pilon:633719..638877 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 310-669:361 |
| Aaloc | 202-306:1759 |
| Aaloc | 1-198:5160 |
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