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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000008_pilon:134652..137911+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039638 ID=XLOC_039638|Name=XLOC_039638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3260bp|location=Sequence derived from alignment at sc0000008_pilon:134652..137911+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGCAACCTCCATGAATTTTCACTATAATCATTGCTTACTTGTGGT
GGCAGTTTCCTTAATTTGTTTTTACAATGGAGTCCATCTACAGAGCAGTA
AGTGTCCATTTGCTCGTCCATATTTTAGATTCTTTGTTTGTTGCCAAAGC
TAGGGGACTTGGGAGGCTACaacatttcaacttttattCATTGAGTCCTG
TCCACATTTCTTACTacttgtgatttgattggtgcGGCCTTCATCCAAGA
TCCTGAATGATTGAATTTTATGTTTGCTTAATGCACACCGTAAAGAATTC
CTGATCACTGAGTAATTAGCCATTTATTCTACTGACTGAGGACGaaaaaa
atcagcacttttacctcCTTTAATTTTGCGGGTTAGAACTGCGGGTTGTT
CCAAATCATTTCAGTCACTCCAACGTCTTCAAAAGTGTAGATACCTAAAC
TCGCTACTGTGATAATCACGGTGGTACCATTATTAGTCTTTAGTCCCTCT
ATAACAACGCAGTTTCAATGTCTAAAAGCTAATTATTAAGCACTTTCCCC
GATCTTTCCTTGTCGGTCAGTTTTACAGCTCTGGTGCAAGAGAGGAGGTT
GGGATCGCTTCTGCCTCCCTATAAAAAATCGACCAGGTATTTCATGTTAC
AATTTCCTGTAGGTTTTttctACCCATAAAAGAACTAAGAAACGTTTTAT
TTCTTCTTCAGTAACCGATTATGAAGAAAAAGGATGTATAGGTTTACCTG
ATGGTGTTTATCCTATAAGGAATCTCAGTGAATACATCGTATGTGAGAAC
AACATTGGAAATATCAGTTCATGTCGTCCAAATGAGATTTACAGCACAAA
CCACAGTTCATGCACACCATTGAAAAACATCACTGAAGGTAATTTTTCCC
AATATGCAAATTTGTACGAAAATTATTTCAGTTGAGAAAAACCGACATTA
TGCATGAAATTTTTCGACCTTTCCGGTATTTACGTTATCCCCAGTAACTT
CTAGATTCATTCATTTTGTAACAGCGCTGCTAATAAAGTATGGTCAGTAC
TCTATTTCTGTTTCGAACATCACTTCGTTAATCTAAGTCACTTGGGTTAA
AAAGACTTATCACCCATTGATTAGTAGATTAGATAGTCttgctttttttt
tcttagaaagCTTTTGTGACAACCGGCCAACAGGTGACTGGATGTACATA
TGGGATTGCCACAAATTCTTTCATTGTTATTTCAACTGGTACAATGTACA
AATCTGTGAAAACAATACGGTTTACAATGCCTTACAAGATGTCTGTACAT
CTGAATCTGAAAGCACATGCATGGCTTACAATCTTACCGAAAGCTCTGGC
AATCATGGAACAGAATCTCCATCTACAACACTGACACCAATCACCACTAT
CAGCCCTGGTGGTTCAAATACTACAAATTCTACCAACACGACTTCAACTC
CATCGACATTTATCACCACACCTTCACCAATAACAACTCAACTGCCACCA
ACAACATCTTATCCAACTTTTAGTCCTGGTGAATCGAATACTACAAATTC
TACAAACACCACATTAGCTCCATCTACACTCACCACTACAGTTTTACCCA
TAACAACTTCACTGCCACTTACAACACCTTATCCAACTAAAAATAGCACC
GCGTCTTCAAATGGTACCACAGACACTAAGGATCTGATATTCCCAAACGA
TTTACAACAAAAGCTTGCAAACAACGAAAGTATTATATTGATTGATGTTC
GAATGCCTTGGGAATTGAAATTAGAAGGAAAAATAGGCGCGTCAATCAAT
ATTCCTCGTAAGTAAATCTTAAAAGTGTTTATTAAGTCAATGCCTCTCCA
CTAGATCAGTTGCGTCAACTCCCCTTAAAATCAGTGTGTCAACGACGAAC
TTTTCCCGCTCTCAAGCCGATATAGAATCCCTTCATCGATAAAACTATGT
AATCTTTCCGTAATAACAACCTCATGATCTGCTAAAATATTGGAGAACGT
GATGAAGGGTTGCAACATCTCCAAAATACACTGACAGCACCTTGCTGTAA
CATAAAGGGGATTTTCCTTTTTAGTACCAAAAATTAGTGATGCATTCCAG
CTCGAAGAAGAACAGTTTGAATCAAGATATGGCATCAAAAAACCTAAGAA
GGATGATTGTAGTCTAATCTTTCACTGCAAATCTGGTGTTCGAAGCATGC
AAGCTGTCACCATTGTGAAATCACTTGGATATACATGGtaaggaaatatt
tttactcAACCGTCAGCGAATTCATATGTTTTTGGTTCATGAcgtaaaaa
acatttaatttactGCCAATCAAATTAATAATACACCCCTATGGTATTTG
AATAATACCTCAAGAACCAAAAACCTTCGAAACAGTGAAAGCTCATCTTT
CTTGGGAAATGTAtatttaaagtctgttcacgataagtgtgcactctttt
ttctttagctataacttttgaaggaattggagagatatttgtgagtggaa
caatttgaagtaaaaaagtctttaaaaaaattctaaaaacgaagatgaaa
atgaaggagaaaaaaatgaagatcttgtagagaagtgcgataacttcatt
ttcactggagagattctttgatcttaggaggtcatcactgtgaagaaatt
tcactaaaatatttattcaatataaagttatgatacaaagttaataagtc
attgaccccaaaaaacagcagaaaacagcgtttttagacgtcaatcagct
tataactttgtttgatatcttttgactgaattattatttttgagaaattt
tttcacagtaatgacgttcgataatgaaggagtcacttcagtgaaaatga
tagttaaaGCACcttttacaagatcttcatttttttcttcttcattttca
tcttcatttttagaatttttttatagatttttttattccaaattgttcca
cttactaatatctttccaacgataccaaatttataaagattgaggaattc
cttcaaaagttataagtaaatgaaaaaagaGTGCACACTTATCGTGAATA
GACTTTAGAGTAACAGTCCAGAAAGATTTCTTTATTACCGGATTAGCAAG
ACAGGGGGCATCATACAAAGTAGTTATATAGATTTAAACTAGAGGTTTAT
TCTAATTCACAACAGTTCCTTTGCTAGTTAACAAAGATTTTCCatgtttt
tttagCCCAAAGAGTCTAGATGGTGGATTTGAAGCATGgaaaaaaatcta
ccaaaaataa Coding sequence (CDS) from alignment at sc0000008_pilon:134652..137911+ >XLOC_039638 ID=XLOC_039638|Name=XLOC_039638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2286bp|location=Sequence derived from alignment at sc0000008_pilon:134652..137911+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGCAACCTCCATGAATTTTCACTATAATCATTGCTTACTTGTGGT
GGCAGTTTCCTTAATTTGTTTTTACAATGGAGTCCATCTACAGAGCAATG
GATGCAACCTCCATGAATTTTCACTATAATCATTGCTTACTTGTGGTGGC
AGTTTCCTTAATTTGTTTTTACAATGGAGTCCATCTACAGAGCATAACCG
ATTATGAAGAAAAAGGATGTATAGGTTTACCTGATGGTGTTTATCCTATA
AGGAATCTCAGTGAATACATCGTATGTGAGAACAACATTGGAAATATCAG
TTCATGTCGTCCAAATGAGATTTACAGCACAAACCACAGTTCATGCACAC
CATTGAAAAACATCACTGAAGTAACCGATTATGAAGAAAAAGGATGTATA
GGTTTACCTGATGGTGTTTATCCTATAAGGAATCTCAGTGAATACATCGT
ATGTGAGAACAACATTGGAAATATCAGTTCATGTCGTCCAAATGAGATTT
ACAGCACAAACCACAGTTCATGCACACCATTGAAAAACATCACTGAAGaa
agCTTTTGTGACAACCGGCCAACAGGTGACTGGATGTACATATGGGATTG
CCACAAATTCTTTCATTGTTATTTCAACTGGTACAATGTACAAATCTGTG
AAAACAATACGGTTTACAATGCCTTACAAGATGTCTGTACATCTGAATCT
GAAAGCACATGCATGGCTTACAATCTTACCGAAAGCTCTGGCAATCATGG
AACAGAATCTCCATCTACAACACTGACACCAATCACCACTATCAGCCCTG
GTGGTTCAAATACTACAAATTCTACCAACACGACTTCAACTCCATCGACA
TTTATCACCACACCTTCACCAATAACAACTCAACTGCCACCAACAACATC
TTATCCAACTTTTAGTCCTGGTGAATCGAATACTACAAATTCTACAAACA
CCACATTAGCTCCATCTACACTCACCACTACAGTTTTACCCATAACAACT
TCACTGCCACTTACAACACCTTATCCAACTAAAAATAGCACCGCGTCTTC
AAATGGTACCACAGACACTAAGGATCTGATATTCCCAAACGATTTACAAC
AAAAGCTTGCAAACAACGAAAGTATTATATTGATTGATGTTCGAATGCCT
TGGGAATTGAAATTAGAAGGAAAAATAGGCGCGTCAATCAATATTCCTCa
aagCTTTTGTGACAACCGGCCAACAGGTGACTGGATGTACATATGGGATT
GCCACAAATTCTTTCATTGTTATTTCAACTGGTACAATGTACAAATCTGT
GAAAACAATACGGTTTACAATGCCTTACAAGATGTCTGTACATCTGAATC
TGAAAGCACATGCATGGCTTACAATCTTACCGAAAGCTCTGGCAATCATG
GAACAGAATCTCCATCTACAACACTGACACCAATCACCACTATCAGCCCT
GGTGGTTCAAATACTACAAATTCTACCAACACGACTTCAACTCCATCGAC
ATTTATCACCACACCTTCACCAATAACAACTCAACTGCCACCAACAACAT
CTTATCCAACTTTTAGTCCTGGTGAATCGAATACTACAAATTCTACAAAC
ACCACATTAGCTCCATCTACACTCACCACTACAGTTTTACCCATAACAAC
TTCACTGCCACTTACAACACCTTATCCAACTAAAAATAGCACCGCGTCTT
CAAATGGTACCACAGACACTAAGGATCTGATATTCCCAAACGATTTACAA
CAAAAGCTTGCAAACAACGAAAGTATTATATTGATTGATGTTCGAATGCC
TTGGGAATTGAAATTAGAAGGAAAAATAGGCGCGTCAATCAATATTCCTC
TACCAAAAATTAGTGATGCATTCCAGCTCGAAGAAGAACAGTTTGAATCA
AGATATGGCATCAAAAAACCTAAGAAGGATGATTGTAGTCTAATCTTTCA
CTGCAAATCTGGTGTTCGAAGCATGCAAGCTGTCACCATTGTGAAATCAC
TTGGATATACATGTACCAAAAATTAGTGATGCATTCCAGCTCGAAGAAGA
ACAGTTTGAATCAAGATATGGCATCAAAAAACCTAAGAAGGATGATTGTA
GTCTAATCTTTCACTGCAAATCTGGTGTTCGAAGCATGCAAGCTGTCACC
ATTGTGAAATCACTTGGATATACATGCCCAAAGAGTCTAGATGGTGGATT
TGAAGCATGgaaaaaaatctaccaaaaataaCCCAAAGAGTCTAGATGGT
GGATTTGAAGCATGgaaaaaaatctaccaaaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000008_pilon | genome | sc0000008_pilon:134652..137911 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1090-1143:3207 |
| Aaloc | 928-1086:2077 |
| Aaloc | 277-924:1159 |
| Aaloc | 100-273:714 |
| Aaloc | 1-96:1 |
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