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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:1583024..1588011+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039565 ID=XLOC_039565|Name=XLOC_039565|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4988bp|location=Sequence derived from alignment at sc0000012_pilon:1583024..1588011+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACAAAGAAATCAATATCTTTTAAAGAATTCCAAAGATCTTCAAT
GAATGCAATTTCAAGAAATAAAGTCCACCCAAAAAGCCCGTATGACCCTG
TCACGTTACAAACTTACGAATCCCCGATAGCAAAGCAAGCAACATCCTCA
CCTTCCACTCCCAATCGCAATCCAgccaaaagaagaaagaaggtTTTTGA
CAAAAAGTCTTTCCTTGCATCAGACTCTGATAATGACGATGTTGATGAAG
TTTTTAATGATGAAGAAAGAAGAACAGGAATAATGGAAAGAAGTATCAAC
AATAGCAATATCAGAAATACAACAGACGATAGAATAAGGAATTCTTCAAT
GTCCCCGTTTGCACAGTCAACGCCAACAAATTCCActcaaaattcaacca
aaaatggtatgtttttattataagagaCTCGACACCGTGGAAAGGTTTTA
TATTGCACTAGTATGCCATAGTTTTCACACTTTTAAACTCACATTTATTT
CCTGGTTTTACGATTCTTGAGAAAATTAgacagaattttcaaaaaccttt
aaatattattttctccCTTCTAAAACTAGAAGACTGGGAGGAATTGTAAT
ACCAATTTAGTATTTTggatgaaatgattttttttcagagatTGAGAACT
TAAAAGCTGTCATCTCAGAGatggaaaagaaaattgatagacTTGAAACA
AGATCAAAGGCCAAAGGAAAGAGCAAGCTTGTAGCATCTAATAAAACAAA
GGTTAGATAGTTGCAAGTAATAATTACATATCATTAAACAAAGGGATGCT
TTTAGTAATAAGgagccgtccatatagtacgtacgcaaagatttcccaaa
aatttgatacccccatcccccttgtacgcaaagaacaatagaaatgatgt
catttaaacattagatgtacgcttttgctaaactcccctctccccccatc
actgtgtacgtactatatggatggcccctaaGTATGAAATTGTATTTTCT
CTGAAAGAGTTGACAagtattagaaaaataaatgacagtAAAAAATGTAG
TAACTTGTCTCTTGAGtggaaaaaatttaaagttaatttttttttcttag
ttgTTTTAGTTAGTCTTTCCTTGACTGTTCACATTCCTATTGAAATTTTG
CATGTAGAGTAATATGTTTAAAGATAACTTCCTGATTTTCCCTGAGTTGA
ATGTTGTGGAAGTCCTACCTCAATAATTCAAGTTCCACCTTAACCTATTT
CCCCCAcctgaaaaccccaaaaaagCACGGTTCACCCTGGTTGTTTTTGG
TTCAGAAACCCAAACCCCCCTGCACATTATGATTTGTGCTACTGATGTTA
TAACCTGTACTTTGaaataatttgtttgtttttttgtatttttagagACT
TGTACGTAAATGTTTTAAAGACTCAATGGATGAAGGTGATTTTGAGGAAT
GGAATCTGGATGATCGTAAAGGGTAAGAATATAAAATGCACTACCGTAAA
tccatttaatttttcaggctctaaggagggcgcttattcaagcggggcgc
ttatttttttatttcagaaatttgtatatcaacaaattcggaatcaatct
gcttaaacttaactttttcaaaaaaggttgatttttcaaaaaaggatgaa
taaaagaaaaatttgaaaaatccaattgacaatttctatcattttattct
taatcgctttctttctttttaagacacaagtatctactcaatatcttatt
caatcaataacaatattcgaATAAGCACCCCTCCCTtgaggggggcgctt
attcgagcggggcgcttataaaattattttaactaaaagggggcgcttat
tcaaggaTTTACGGTAATTAATTCACTATGATTTGATGATGAACAGTCCC
AATGCAAATCCATCATTAAAAAGGATAATAAACCTGTCAAGGCAATTTTT
GTTGTAAATCTCAACAggaaaagattatttttaagTACAATTTGCCCATC
AAACCTTCACTGTTTTTAATTCCATGTCTGTTTATTTTAGAGCTTTTTCT
AATCATAACAAGCTGTTGTCACAGCACATTGTGGATAGTGTCAAAGGCCT
TCATCCAGATTTGGAAAATGATGAAATCGAAAGTATGTTTTTACTAATCA
AGTTTATTAATAGTACTCAGTAGCATCATATTTTAATCAGAAAAAATATA
GCAAGAGAAATTTTAACTCTGATTATCGActcataaaaattttgattttg
cgtggatttatttttgcgaattgctttttcaaaaaatttagggtggatta
attttagcaatttgtCGATTTGACATGTTTTACCAAATAAATTCTAGTAA
AAACGGTACTAAACACATAAAATTTCTCCTGTCCTAACTCTGCTTTTCGG
CCACCACCATCACCACtttaataattcaaaaaatgtaggctgctatattt
aaaaaaaaactgcttcTCCCCCCAATAGGAAATTGATGTTTTCTTAGTCT
TCTGACCTATAGCCTTAAAATGCACCTGAAATTACATGTGGTCAATATGT
AATTAATATTCATTTTAGACACCAACAAAGTGAATGCTACAAATGTGAAA
TTATTCTATTTAAAACTTAACAAAACTTTATTCTATTAGATGCTGTGCGA
ATCAATTTCCGCTCCAAAAAGGACACCAAGAGGAAAACTGAGAGGAACCC
AAATTATTTAGCAGATTGTGCCAGTACCTCAAGAAAAGAAACGGTATGGA
TATTATTTATCAGATAAGGATTCTTTCTGATTTGTCGAACTTGTAGACTA
ATTTATTGTGCTTATAGCAAATGTTCATATCCCAAATACGTGAGGAGatc
taattttggtgggaattaAATTTAGAGATTGTTGAATGTTTTTTAAACTT
AGAATGGttataaattcaataaaatatcaaaacttctCCCAAGAATAtgc
ctttaaaatattttgtagaatttaattttgtgattgATGGCGTAGTAATC
TCATGGGTTAAATTTGCCTGGaaatgcttttagaaaaatgacaaaatatc
tCCTCTATATTTTTATCGTATTATGCTTAGTATTTTCTCTTGTGTATCAT
TCAAAAACTtaatcaagcaaaacaaaatttttcactAGTTTCATGACTTT
AATAGGGATGATAAACCAAAAGGGCATTTTAAGGCGGGCCTCATgggttt
ttcgaaaatttgggggggtagcaaaaaaggTGTCACCTCTCTTTTGCAGG
GGGCTGATACCCTTGAGAGCACTATGCCTTACACATGGCATGttaaggtt
tttttatttagcAATTCAATGATGTCTTCCTTCCttttttttAGAAACTT
AATAGACGCTTGATGACCCTCAAGAAATTTGACGTGGATCAGCCAACGAA
AACGGCCATCCAAACAGTCTTGTGTCCAGCAATGATGTCATCTGAAGACG
AAGACATACAAGATGGTGAAAAATCCTTCATAGTGAGAAGGCCTTCATGG
AGGGCGGAAGGGGTGGctggtgtttttgaaaaactggATCAGTTACACAA
AGACAGTCAGTCAAAACATTCACGGTACAGATCCTTAAAACGTTGTGATG
GTCCTCCCTCTGACCGCCAGGAGCCTGTGTGGTCAGATAAAATTAAGAAA
GCGATAGattattttaactaatttttaattaattaaaacagtctattgtt
ttcttgattttatcttaatttCAGGTTTTCTGAACGGTTAGGGAATATTT
ACAGTTTTTGTCAaggaaaaacattaatttttcagaACTCTCTACATCAC
TCCTTTTTGAAGTACTTTTACCTGGAATGTTTTGACTGGCTGTTCTTGTG
TCAAATACCATAattttaccgtatgcttataaaaaaatgagtgtaccTGA
TTCGTGAAAGTTCCTTtcctttgtcaatatttttttgagtaatgttacta
cacgtttttttaatttaaaacataacgcttataagcataacaaGACTATG
ACTTTGACTCGAATACAATGGATTTATTGTTATAGAACAAAGGCAATTTT
Agcgtacatgttttttttataagcaagtgtatgccccttggtcaggctcg
tgtatgcttaagctCTCAAAGCGTCCAGGCATAacttatgcttatgattc
acctcagcaaagtttttaatgaaatttcagaagttttgtaaaaatttgtt
cagattttgggagcagtggaatgtaagAAACcgtggaaagtctttttttt
acttgacctctgccaaacctttttaaacagataaaaatgacaactggaaa
aatatttcaggctgacgtatatgcttatgttacGTTTAGGAATtttgcaa
atctgagcctttatatgcttataagcgttatgcttataagcgttatgctt
ataaaaaaacatgtatgtcaAACCTCGGCTTAAATCACCTTttgcttaaa
aagaaaaaacgtgcAATTCATAATTTGACATATCTGTTATTTGTAAACGA
TAATTATTtagtattattttatttataaagttcACATTCACGCATTTATG
TGTaattattttcaacaaaatgtaAATTCATAAATTATTTGATAACATTT
ATTCATAAATAGaaaacttttgcaaaagaaacatgcattttgaattaatt
ttatcCCGCATTTTAATACTACATTGTCATTCTAGAAATAATTACCCTAA
gggaagaaaaagttttttcaagttaaatttGATAGATAAATCTCACCGAT
GACATTGTTTGGAGTATCAACTACAGCAAATTAATCCCGAATCCGATGTA
TATATCTGAGTTATTTGAACGacactgaaaatgaaatctaTTCTGAAAAT
CCGATATCcgataatccaaatttattCCTTTCCTAATACCGTAAATGCCA
TAATCCCCGAAACCGATATCCGATATAGGAAATTTGTAAATAGCCAGATA
TCCGATATTCCGCGTTTACTTCTTTCCAAATACCGTAA Coding sequence (CDS) from alignment at sc0000012_pilon:1583024..1588011+ >XLOC_039565 ID=XLOC_039565|Name=XLOC_039565|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000012_pilon:1583024..1588011+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACAAAGAAATCAATATCTTTTAAAGAATTCCAAAGATCTTCAAT
GAATGCAATTTCAAGAAATAAAGTCCACCCAAAAAGCCCGTATGACCCTG
TCACGTTACAAACTTACGAATCCCCGATAGCAAAGCAAGCAACATCCTCA
CCTTCCACTCCCAATCGCAATCCAgccaaaagaagaaagaaggtTTTTGA
CAAAAAGTCTTTCCTTGCATCAGACTCTGATAATGACGATGTTGATGAAG
TTTTTAATGATGAAGAAAGAAGAACAGGAATAATGGAAAGAAGTATCAAC
AATAGCAATATCAGAAATACAACAGACGATAGAATAAGGAATTCTTCAAT
GTCCCCGTTTGCACAGTCAACGCCAACAAATTCCActcaaaattcaacca
aaaatgATGTCAACAAAGAAATCAATATCTTTTAAAGAATTCCAAAGATC
TTCAATGAATGCAATTTCAAGAAATAAAGTCCACCCAAAAAGCCCGTATG
ACCCTGTCACGTTACAAACTTACGAATCCCCGATAGCAAAGCAAGCAACA
TCCTCACCTTCCACTCCCAATCGCAATCCAgccaaaagaagaaagaaggt
TTTTGACAAAAAGTCTTTCCTTGCATCAGACTCTGATAATGACGATGTTG
ATGAAGTTTTTAATGATGAAGAAAGAAGAACAGGAATAATGGAAAGAAGT
ATCAACAATAGCAATATCAGAAATACAACAGACGATAGAATAAGGAATTC
TTCAATGTCCCCGTTTGCACAGTCAACGCCAACAAATTCCActcaaaatt
caaccaaaaatgagatTGAGAACTTAAAAGCTGTCATCTCAGAGatggaa
aagaaaattgatagacTTGAAACAAGATCAAAGGCCAAAGGAAAGAGCAA
GCTTGTAGCATCTAATAAAACAAAGagatTGAGAACTTAAAAGCTGTCAT
CTCAGAGatggaaaagaaaattgatagacTTGAAACAAGATCAAAGGCCA
AAGGAAAGAGCAAGCTTGTAGCATCTAATAAAACAAAGagACTTGTACGT
AAATGTTTTAAAGACTCAATGGATGAAGGTGATTTTGAGGAATGGAATCT
GGATGATCGTAAAGGagACTTGTACGTAAATGTTTTAAAGACTCAATGGA
TGAAGGTGATTTTGAGGAATGGAATCTGGATGATCGTAAAGGAGCTTTTT
CTAATCATAACAAGCTGTTGTCACAGCACATTGTGGATAGTGTCAAAGGC
CTTCATCCAGATTTGGAAAATGATGAAATCGAAAAGCTTTTTCTAATCAT
AACAAGCTGTTGTCACAGCACATTGTGGATAGTGTCAAAGGCCTTCATCC
AGATTTGGAAAATGATGAAATCGAAAATGCTGTGCGAATCAATTTCCGCT
CCAAAAAGGACACCAAGAGGAAAACTGAGAGGAACCCAAATTATTTAGCA
GATTGTGCCAGTACCTCAAGAAAAGAAACGATGCTGTGCGAATCAATTTC
CGCTCCAAAAAGGACACCAAGAGGAAAACTGAGAGGAACCCAAATTATTT
AGCAGATTGTGCCAGTACCTCAAGAAAAGAAACGAAACTTAATAGACGCT
TGATGACCCTCAAGAAATTTGACGTGGATCAGCCAACGAAAACGGCCATC
CAAACAGTCTTGTGTCCAGCAATGATGTCATCTGAAGACGAAGACATACA
AGATGGTGAAAAATCCTTCATAGTGAGAAGGCCTTCATGGAGGGCGGAAG
GGGTGGctggtgtttttgaaaaactggATCAGTTACACAAAGACAGTCAG
TCAAAACATTCACGAAACTTAATAGACGCTTGATGACCCTCAAGAAATTT
GACGTGGATCAGCCAACGAAAACGGCCATCCAAACAGTCTTGTGTCCAGC
AATGATGTCATCTGAAGACGAAGACATACAAGATGGTGAAAAATCCTTCA
TAGTGAGAAGGCCTTCATGGAGGGCGGAAGGGGTGGctggtgtttttgaa
aaactggATCAGTTACACAAAGACAGTCAGTCAAAACATTCACGAGATAT
CCGATATTCCGCGTTTACTTCTTTCCAAATACCGTAAAGATATCCGATAT
TCCGCGTTTACTTCTTTCCAAATACCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:1583024..1588011 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1024-1065:4947 |
| Aaloc | 793-1020:3345 |
| Aaloc | 691-792:2642 |
| Aaloc | 598-687:2042 |
| Aaloc | 520-594:1396 |
| Aaloc | 409-519:641 |
| Aaloc | 1-405:1 |
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