XLOC_039546 (mRNA) -

Overview
NameXLOC_039546
Unique NameXLOC_039546
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000043_pilon:1287285..1287683-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039546 ID=XLOC_039546|Name=XLOC_039546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=399bp|location=Sequence derived from alignment at sc0000043_pilon:1287285..1287683- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGCAGATCGAAAAGCTATTTCATCGTGCCAAAAGACAGGAAACTACCC
TCAAACCAACAAACAATGCTTGCCCAACCGGCCAACCGATAAACTCTTAG
AACACTTTAAGAAACATTTTAACCCTACTGACCCATCAATTGATACGTCA
CCTGAGGAAATAAATCAGACACTTCCGAAATTTGTTAAGGAACTTCGAAA
GATTTCTGACAGTACTGTCGTCAACGACCTCCCACCTACAGCCGATGAAA
TAGAAAAACACATCCGTCTCCTCAAAAATAATAAAGCAAGCAATGACGTT
GAAGCAGAGCTACTGAAGAAATGTTCACATCCGATAATGATTCAAGTAAT
CCAAAGAATCACCAACAACTTGTTGGAAAATCTAGATTTACCGAACGCC

Coding sequence (CDS) from alignment at sc0000043_pilon:1287285..1287683-

>XLOC_039546 ID=XLOC_039546|Name=XLOC_039546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=798bp|location=Sequence derived from alignment at sc0000043_pilon:1287285..1287683- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGCAGATCGAAAAGCTATTTCATCGTGCCAAAAGACAGGAAACTACCC
TCAAACCAACAAACAATGCTTGCCCAACCGGCCAACCGATAAACTCTTAG
AACACTTTAAGAAACATTTTAACCCTACTGACCCATCAATTGATACGTCA
CCTGAGGAAATAAATCAGACACTTCCGAAATTTGTTAAGGAACTTCGAAA
GATTTCTGACAGTACTGTCGTCAACGACCTCCCACCTACAGCCGATGAAA
TAGAAAAACACATCCGTCTCCTCAAAAATAATAAAGCAAGCAATGACGTT
GAAGCAGAGCTACTGAAGAAATGTTCACATCCGATAATGATTCAAGTAAT
CCAAAGAATCACCAACAACTTGTTGGAAAATCTAGATTTACCGAACGCCC
AAGCAGATCGAAAAGCTATTTCATCGTGCCAAAAGACAGGAAACTACCCT
CAAACCAACAAACAATGCTTGCCCAACCGGCCAACCGATAAACTCTTAGA
ACACTTTAAGAAACATTTTAACCCTACTGACCCATCAATTGATACGTCAC
CTGAGGAAATAAATCAGACACTTCCGAAATTTGTTAAGGAACTTCGAAAG
ATTTCTGACAGTACTGTCGTCAACGACCTCCCACCTACAGCCGATGAAAT
AGAAAAACACATCCGTCTCCTCAAAAATAATAAAGCAAGCAATGACGTTG
AAGCAGAGCTACTGAAGAAATGTTCACATCCGATAATGATTCAAGTAATC
CAAAGAATCACCAACAACTTGTTGGAAAATCTAGATTTACCGAACGCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039546XLOC_039546-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000043_pilongenomesc0000043_pilon:1287285..1287683 -
Properties
Property NameValue
Aaloc1-399:400